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BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921812|Adiantum capillus-veneris mRNA, clone: YMU001_000154_E01. (474 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9CRC9|A9CRC9_TOBAC RNA-dependent RNA polymerase 6 OS=Nicotia... 56 8e-07 tr|B4FZU3|B4FZU3_MAIZE Putative uncharacterized protein OS=Zea m... 53 7e-06 tr|Q9SG02|Q9SG02_ARATH Putative RNA-directed RNA polymerase; 739... 53 9e-06 tr|Q9LKP0|Q9LKP0_ARATH RNA-dependent RNA polymerase OS=Arabidops... 53 9e-06 tr|B5BLP6|B5BLP6_TOBAC RNA-dependent RNA polymerase 6 OS=Nicotia... 50 4e-05 tr|B3TNC1|B3TNC1_9SOLA RNA-dependent RNA polymerase OS=Nicotiana... 50 4e-05 tr|Q647I5|Q647I5_NICBE Putative RNA-dependent RNA polymerase SDE... 49 2e-04 tr|A7P5T3|A7P5T3_VITVI Chromosome chr4 scaffold_6, whole genome ... 48 2e-04 tr|B3SND7|B3SND7_GOSHI RNA-dependent RNA polymerase OS=Gossypium... 48 3e-04 tr|Q6RFH9|Q6RFH9_HORVD RNA-directed RNA polymerase 2 OS=Hordeum ... 47 4e-04 tr|B5M059|B5M059_HORVU RNA-directed RNA polymerase 1a (Fragment)... 47 4e-04 tr|B6DZR9|B6DZR9_HORVU RNA-directed RNA polymerase 6a (Fragment)... 47 5e-04 tr|A3AB51|A3AB51_ORYSJ Putative uncharacterized protein OS=Oryza... 47 6e-04 tr|A2X9D0|A2X9D0_ORYSI Putative uncharacterized protein OS=Oryza... 47 6e-04 tr|A0MD71|A0MD71_PHYPA Putative RNA-dependent RNA polymerase 6 O... 47 6e-04 tr|A9U458|A9U458_PHYPA RNA-directed RNA polymerase (Fragment) OS... 46 0.001 tr|A9T7J6|A9T7J6_PHYPA RNA-directed RNA polymerase OS=Physcomitr... 45 0.002 tr|Q8LHH9|Q8LHH9_ORYSJ Putative RNA-dependent RNA polymerase (SH... 44 0.004 tr|Q0JM85|Q0JM85_ORYSJ Os01g0527600 protein (Fragment) OS=Oryza ... 44 0.004 tr|B8A9C4|B8A9C4_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004 tr|B2B9K0|B2B9K0_GOSHI RNA-dependent RNA polymerase OS=Gossypium... 44 0.004 tr|A2ZTX5|A2ZTX5_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.004 tr|A7P3W5|A7P3W5_VITVI Chromosome chr1 scaffold_5, whole genome ... 44 0.005 tr|A5AM83|A5AM83_VITVI Putative uncharacterized protein OS=Vitis... 44 0.005 tr|Q6L447|Q6L447_SOLDE RNA-directed RNA polymerase-like, putativ... 42 0.012 tr|Q6L3V2|Q6L3V2_SOLDE RNA dependent RNA polymerase family prote... 42 0.012 tr|Q6L3P3|Q6L3P3_SOLDE RNA-directed RNA polymerase, putative OS=... 42 0.012 tr|Q19VG2|Q19VG2_MAIZE RNA-dependent RNA polymerase OS=Zea mays ... 42 0.012 tr|Q0KIR2|Q0KIR2_SOLDE RNA dependent RNA polymerase family prote... 42 0.012 tr|Q0KIK9|Q0KIK9_SOLTU RNA-directed RNA polymerase, putative OS=... 42 0.012
>tr|A9CRC9|A9CRC9_TOBAC RNA-dependent RNA polymerase 6 OS=Nicotiana tabacum GN=NtRDR6 PE=2 SV=1 Length = 1197
Score = 56.2 bits (134), Expect = 8e-07 Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 6/66 (9%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREVN-----SDFLLLSFPWIAVEDLARIKSRKRR-AYESYYK 209 KASAWY VTYHP VA+ E+ S+ ++LSF WIA + LARIK R RR Y K Sbjct: 1125 KASAWYQVTYHPHWVARSLELQLPDAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTK 1184
Query: 210 LIQSFG 227 I S G Sbjct: 1185 PINSLG 1190
>tr|B4FZU3|B4FZU3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 552
Score = 53.1 bits (126), Expect = 7e-06 Identities = 32/51 (62%), Positives = 34/51 (66%), Gaps = 5/51 (9%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREV-NSDF----LLLSFPWIAVEDLARIKSRKR 185 KASAWY VTYHP+ V K RE+ SD LSF WIAVE LARIK R R Sbjct: 480 KASAWYQVTYHPEWVQKSREMFKSDCEDMPARLSFAWIAVEHLARIKIRCR 530
>tr|Q9SG02|Q9SG02_ARATH Putative RNA-directed RNA polymerase; 73997-69985 (RNA-directed RNA polymerase-like protein) (SGS2) OS=Arabidopsis thaliana GN=T9C5.95 PE=4 SV=1 Length = 1196
Score = 52.8 bits (125), Expect = 9e-06 Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 5/51 (9%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREV-----NSDFLLLSFPWIAVEDLARIKSRKR 185 KASAWY+VTYHP+ V K E+ +S +LSF WIA + LARIK R R Sbjct: 1124 KASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSR 1174
>tr|Q9LKP0|Q9LKP0_ARATH RNA-dependent RNA polymerase OS=Arabidopsis thaliana GN=SDE1 PE=4 SV=1 Length = 1196
Score = 52.8 bits (125), Expect = 9e-06 Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 5/51 (9%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREV-----NSDFLLLSFPWIAVEDLARIKSRKR 185 KASAWY+VTYHP+ V K E+ +S +LSF WIA + LARIK R R Sbjct: 1124 KASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSR 1174
>tr|B5BLP6|B5BLP6_TOBAC RNA-dependent RNA polymerase 6 OS=Nicotiana tabacum GN=rdr6 PE=4 SV=1 Length = 1197
Score = 50.4 bits (119), Expect = 4e-05 Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 6/66 (9%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREVN-----SDFLLLSFPWIAVEDLARIKSRKR-RAYESYYK 209 KASAWY VTY+P VA+ E+ S ++LSF WIA + LARIK R R Y K Sbjct: 1125 KASAWYQVTYNPHWVARSLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTK 1184
Query: 210 LIQSFG 227 I S G Sbjct: 1185 PINSLG 1190
>tr|B3TNC1|B3TNC1_9SOLA RNA-dependent RNA polymerase OS=Nicotiana attenuata PE=2 SV=1 Length = 1197
Score = 50.4 bits (119), Expect = 4e-05 Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 6/66 (9%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREVN-----SDFLLLSFPWIAVEDLARIKSRKR-RAYESYYK 209 KASAWY VTY+P VA+ E+ S ++LSF WIA + LARIK R R Y K Sbjct: 1125 KASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFAWIAADYLARIKIRHRGLQYSDSTK 1184
Query: 210 LIQSFG 227 I S G Sbjct: 1185 PINSLG 1190
>tr|Q647I5|Q647I5_NICBE Putative RNA-dependent RNA polymerase SDE1 OS=Nicotiana benthamiana PE=2 SV=1 Length = 1197
Score = 48.5 bits (114), Expect = 2e-04 Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 6/66 (9%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREVN-----SDFLLLSFPWIAVEDLARIKSRKR-RAYESYYK 209 KASAWY VTY+P VA+ E+ S ++LSF WIA + LARI R R Y K Sbjct: 1125 KASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFAWIAADYLARINIRHRGLQYSDSTK 1184
Query: 210 LIQSFG 227 I S G Sbjct: 1185 PINSLG 1190
>tr|A7P5T3|A7P5T3_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032651001 PE=4 SV=1 Length = 1197
Score = 48.1 bits (113), Expect = 2e-04 Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 6/52 (11%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREVNS------DFLLLSFPWIAVEDLARIKSRKR 185 KASAWY VTYHP V K E+ + + ++LSF WI + LARIK R++ Sbjct: 1124 KASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLARIKIRRK 1175
>tr|B3SND7|B3SND7_GOSHI RNA-dependent RNA polymerase OS=Gossypium hirsutum PE=4 SV=1 Length = 1110
Score = 47.8 bits (112), Expect = 3e-04 Identities = 23/51 (45%), Positives = 28/51 (54%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREVNSDFLLLSFPWIAVEDLARIKSRKRRAYES 200 KASAWYYVTYHP + E + LSFPW + L +IK K E+ Sbjct: 1043 KASAWYYVTYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREA 1093
>tr|Q6RFH9|Q6RFH9_HORVD RNA-directed RNA polymerase 2 OS=Hordeum vulgare var. distichum GN=RDRP2 PE=2 SV=1 Length = 1115
Score = 47.4 bits (111), Expect = 4e-04 Identities = 21/45 (46%), Positives = 27/45 (60%) Frame = +3
Query: 48 KASAWYYVTYHPDSVAKVREVNSDFLLLSFPWIAVEDLARIKSRK 182 KASAWY+VTYHP+ ++ L+SFPW + L IK RK Sbjct: 1051 KASAWYHVTYHPEYYGCYNKIYERPHLISFPWCVYDKLLHIKQRK 1095
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