BP921815 |
Clone id |
YMU001_000154_E04 |
Library |
YMU01 |
Length |
370 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000154_E04. |
Accession |
BP921815 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL587Contig1 |
Sequence |
TGTGTAAATGATGTATTCCCCATCTCCACAGACAACAACAAATCTCCCATTTGGATTGTG CTTCAAACTTTGAGGATAAAGATCACAGCTTCCAAGCTCCTTGACGGCCAACGGTAATCT CTCCCCATCAACAACCTCATCTAGGCCAACCGATTTGATATTTACTGTCTGAATTTCATT GTGTTTGGCCCATATGATCTTCCCACTGTTATCCATAGAGGCAACTGGCTCTTCTCTACC AATCTTTATCATTATAGTACCCTCATCATACCCTATAGCAATCCTATTTGAGCTCTTTAA ATATCCAATGGTCCACACTCTTTCCAACCCATAGTTCAGTGTATTCTCAAGCCTATAAGT AGTTGCATGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9CAA0 |
Definition |
sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana |
Align length |
123 |
Score (bit) |
231.0 |
E-value |
6.0e-61 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SAN0 |
Definition |
tr|A9SAN0|A9SAN0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
124 |
Score (bit) |
232.0 |
E-value |
6.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921815|Adiantum capillus-veneris mRNA, clone: YMU001_000154_E04. (370 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SAN0|A9SAN0_PHYPA Predicted protein OS=Physcomitrella paten... 232 6e-60 tr|B3H5V5|B3H5V5_ARATH Uncharacterized protein At1g79990.2 OS=Ar... 231 1e-59 tr|A7P7E9|A7P7E9_VITVI Chromosome chr9 scaffold_7, whole genome ... 231 2e-59 tr|A5AWP2|A5AWP2_VITVI Putative uncharacterized protein OS=Vitis... 231 2e-59 tr|B8AE85|B8AE85_ORYSI Putative uncharacterized protein OS=Oryza... 226 6e-58 tr|A3A4F1|A3A4F1_ORYSJ Putative uncharacterized protein OS=Oryza... 226 6e-58 tr|B8ADW8|B8ADW8_ORYSI Putative uncharacterized protein OS=Oryza... 224 2e-57 tr|A3B8B8|A3B8B8_ORYSJ Putative uncharacterized protein OS=Oryza... 224 2e-57 tr|A2Y963|A2Y963_ORYSI Putative uncharacterized protein OS=Oryza... 224 2e-57 tr|A9TJC1|A9TJC1_PHYPA Predicted protein OS=Physcomitrella paten... 223 4e-57 tr|A1YKF7|A1YKF7_BRASY Coatomer complex subunit OS=Brachypodium ... 222 8e-57 tr|A7PES4|A7PES4_VITVI Chromosome chr11 scaffold_13, whole genom... 221 2e-56 tr|A3A4F0|A3A4F0_ORYSJ Putative uncharacterized protein OS=Oryza... 217 2e-55 tr|A8JGS8|A8JGS8_CHLRE Beta'-cop OS=Chlamydomonas reinhardtii GN... 209 4e-53 tr|Q01GI8|Q01GI8_OSTTA Coatomer complex subunit, putative; 33791... 206 4e-52 tr|A4RR16|A4RR16_OSTLU Predicted protein OS=Ostreococcus lucimar... 202 9e-51 tr|B7QCB7|B7QCB7_IXOSC Vesicle coat complex COPI, beta' subunit,... 199 7e-50 tr|B6LX76|B6LX76_BRAFL Putative uncharacterized protein OS=Branc... 199 7e-50 tr|Q5M7X1|Q5M7X1_RAT Coatomer protein complex, subunit beta 2 (B... 198 1e-49 tr|Q6JWU7|Q6JWU7_DANRE Coatomer protein complex subunit beta 2 O... 197 2e-49 tr|B3DH83|B3DH83_DANRE Coatomer protein complex, subunit beta 2 ... 197 2e-49 tr|B0R171|B0R171_DANRE Coatomer protein complex, subunit beta 2 ... 197 2e-49 tr|Q7ZTR0|Q7ZTR0_XENLA Wu:fc55e05-prov protein OS=Xenopus laevis... 197 2e-49 tr|Q4VA86|Q4VA86_XENTR Putative uncharacterized protein mgc10808... 197 2e-49 tr|B3RZB7|B3RZB7_TRIAD Putative uncharacterized protein (Fragmen... 197 2e-49 tr|Q4SBJ7|Q4SBJ7_TETNG Chromosome 15 SCAF14667, whole genome sho... 197 3e-49 tr|B4DZI8|B4DZI8_HUMAN cDNA FLJ56271, highly similar to Coatomer... 197 3e-49 tr|A7RL77|A7RL77_NEMVE Predicted protein OS=Nematostella vectens... 189 5e-47 tr|B2ZF96|B2ZF96_9BILA Beta prime coatomer protein complex subun... 187 2e-46 tr|B5AH80|B5AH80_9BILA Coatomer OS=Adineta vaga PE=4 SV=1 184 2e-45
>tr|A9SAN0|A9SAN0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_210315 PE=4 SV=1 Length = 909
Score = 232 bits (592), Expect = 6e-60 Identities = 111/124 (89%), Positives = 118/124 (95%), Gaps = 1/124 (0%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNRIAIGYDEGTIMIKIGREEPVASMDNSGKIIW 190 H+TTYRLENTLNYGLERVWTIGY+K SNR+AIGYDEGTIMIK+GREEPVASMDNSGKIIW Sbjct: 257 HSTTYRLENTLNYGLERVWTIGYIKGSNRVAIGYDEGTIMIKLGREEPVASMDNSGKIIW 316
Query: 189 AKHNEIQTVNIKSVGLD-EVVDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEY 13 AK NEIQTVNIK+V D E+ DGERLPLAVKELGSCDLYPQSL+HNPNGRFVVVCGDGEY Sbjct: 317 AKQNEIQTVNIKAVPADFEITDGERLPLAVKELGSCDLYPQSLEHNPNGRFVVVCGDGEY 376
Query: 12 IIYT 1 IIYT Sbjct: 377 IIYT 380
>tr|B3H5V5|B3H5V5_ARATH Uncharacterized protein At1g79990.2 OS=Arabidopsis thaliana GN=At1g79990 PE=4 SV=1 Length = 912
Score = 231 bits (590), Expect = 1e-59 Identities = 108/123 (87%), Positives = 115/123 (93%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNRIAIGYDEGTIMIKIGREEPVASMDNSGKIIW 190 HATTYRLENTLNYGLERVW IG++K S R+ IGYDEG+IM+K+GRE PVASMDNSGKIIW Sbjct: 257 HATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLGREIPVASMDNSGKIIW 316
Query: 189 AKHNEIQTVNIKSVGLDEVVDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEYI 10 AKHNEI TVNIKSVG DEV DGERLPLAVKELG+CDLYPQSLKHNPNGRFVVVCGDGEYI Sbjct: 317 AKHNEIHTVNIKSVGADEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYI 376
Query: 9 IYT 1 IYT Sbjct: 377 IYT 379
>tr|A7P7E9|A7P7E9_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034434001 PE=4 SV=1 Length = 1017
Score = 231 bits (588), Expect = 2e-59 Identities = 109/124 (87%), Positives = 116/124 (93%), Gaps = 1/124 (0%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNRIAIGYDEGTIMIKIGREEPVASMDNSGKIIW 190 HATTYRLENTLNYGLERVW +GY+K S R+ IGYDEG+IM+K+GRE PVASMDNSGKIIW Sbjct: 314 HATTYRLENTLNYGLERVWAVGYMKGSRRVVIGYDEGSIMVKLGREVPVASMDNSGKIIW 373
Query: 189 AKHNEIQTVNIKSVGLD-EVVDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEY 13 AKHNEIQTVNIKSVG D EV DGERLPLAVKELG+CDLYPQSLKHNPNGRFVVVCGDGEY Sbjct: 374 AKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEY 433
Query: 12 IIYT 1 IIYT Sbjct: 434 IIYT 437
>tr|A5AWP2|A5AWP2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004513 PE=4 SV=1 Length = 901
Score = 231 bits (588), Expect = 2e-59 Identities = 109/124 (87%), Positives = 116/124 (93%), Gaps = 1/124 (0%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNRIAIGYDEGTIMIKIGREEPVASMDNSGKIIW 190 HATTYRLENTLNYGLERVW +GY+K S R+ IGYDEG+IM+K+GRE PVASMDNSGKIIW Sbjct: 250 HATTYRLENTLNYGLERVWAVGYMKGSRRVVIGYDEGSIMVKLGREVPVASMDNSGKIIW 309
Query: 189 AKHNEIQTVNIKSVGLD-EVVDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEY 13 AKHNEIQTVNIKSVG D EV DGERLPLAVKELG+CDLYPQSLKHNPNGRFVVVCGDGEY Sbjct: 310 AKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEY 369
Query: 12 IIYT 1 IIYT Sbjct: 370 IIYT 373
>tr|B8AE85|B8AE85_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06330 PE=4 SV=1 Length = 922
Score = 226 bits (575), Expect = 6e-58 Identities = 105/124 (84%), Positives = 116/124 (93%), Gaps = 1/124 (0%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNRIAIGYDEGTIMIKIGREEPVASMDNSGKIIW 190 H+TTYRLENTLNYGLERVW +GY+K S R+ IGYDEGTIMIKIGRE PVASMD+SGKIIW Sbjct: 354 HSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIGREVPVASMDSSGKIIW 413
Query: 189 AKHNEIQTVNIKSVGLD-EVVDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEY 13 +KHNEIQTVNIK++G D E+ DGERLPLAVKELG+CDLYPQSL+HNPNGRFVVVCGDGEY Sbjct: 414 SKHNEIQTVNIKTIGADNEIADGERLPLAVKELGTCDLYPQSLRHNPNGRFVVVCGDGEY 473
Query: 12 IIYT 1 IIYT Sbjct: 474 IIYT 477
>tr|A3A4F1|A3A4F1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005673 PE=4 SV=1 Length = 812
Score = 226 bits (575), Expect = 6e-58 Identities = 105/124 (84%), Positives = 116/124 (93%), Gaps = 1/124 (0%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNRIAIGYDEGTIMIKIGREEPVASMDNSGKIIW 190 H+TTYRLENTLNYGLERVW +GY+K S R+ IGYDEGTIMIKIGRE PVASMD+SGKIIW Sbjct: 270 HSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIGREVPVASMDSSGKIIW 329
Query: 189 AKHNEIQTVNIKSVGLD-EVVDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEY 13 +KHNEIQTVNIK++G D E+ DGERLPLAVKELG+CDLYPQSL+HNPNGRFVVVCGDGEY Sbjct: 330 SKHNEIQTVNIKTIGADNEIADGERLPLAVKELGTCDLYPQSLRHNPNGRFVVVCGDGEY 389
Query: 12 IIYT 1 IIYT Sbjct: 390 IIYT 393
>tr|B8ADW8|B8ADW8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06329 PE=4 SV=1 Length = 897
Score = 224 bits (571), Expect = 2e-57 Identities = 104/124 (83%), Positives = 115/124 (92%), Gaps = 1/124 (0%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNRIAIGYDEGTIMIKIGREEPVASMDNSGKIIW 190 H+TTYRLENTLNYGLERVW +GY+K S R+ IGYDEGTIMIKIGRE PVASMD+SGKIIW Sbjct: 250 HSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIGREVPVASMDSSGKIIW 309
Query: 189 AKHNEIQTVNIKSVGLD-EVVDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEY 13 +KHNEIQTVNIK++G D E+ DGERLPL VKELG+CDLYPQSL+HNPNGRFVVVCGDGEY Sbjct: 310 SKHNEIQTVNIKTIGADNEIADGERLPLVVKELGTCDLYPQSLRHNPNGRFVVVCGDGEY 369
Query: 12 IIYT 1 IIYT Sbjct: 370 IIYT 373
>tr|A3B8B8|A3B8B8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019290 PE=4 SV=1 Length = 902
Score = 224 bits (570), Expect = 2e-57 Identities = 107/124 (86%), Positives = 114/124 (91%), Gaps = 1/124 (0%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNRIAIGYDEGTIMIKIGREEPVASMDNSGKIIW 190 H+TTYRLENTLNYGLERVW +GY+K S R+ IGYDEGTIMIK+GRE PVASMD SGKIIW Sbjct: 252 HSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMGREVPVASMDTSGKIIW 311
Query: 189 AKHNEIQTVNIKSVGLD-EVVDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEY 13 AKHNEIQTVNIK+VG EV DGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGE+ Sbjct: 312 AKHNEIQTVNIKTVGAGFEVTDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEF 371
Query: 12 IIYT 1 IIYT Sbjct: 372 IIYT 375
>tr|A2Y963|A2Y963_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21602 PE=4 SV=1 Length = 902
Score = 224 bits (570), Expect = 2e-57 Identities = 107/124 (86%), Positives = 114/124 (91%), Gaps = 1/124 (0%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNRIAIGYDEGTIMIKIGREEPVASMDNSGKIIW 190 H+TTYRLENTLNYGLERVW +GY+K S R+ IGYDEGTIMIK+GRE PVASMD SGKIIW Sbjct: 252 HSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMGREVPVASMDTSGKIIW 311
Query: 189 AKHNEIQTVNIKSVGLD-EVVDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEY 13 AKHNEIQTVNIK+VG EV DGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGE+ Sbjct: 312 AKHNEIQTVNIKTVGAGFEVTDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEF 371
Query: 12 IIYT 1 IIYT Sbjct: 372 IIYT 375
>tr|A9TJC1|A9TJC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_146433 PE=4 SV=1 Length = 890
Score = 223 bits (568), Expect = 4e-57 Identities = 113/138 (81%), Positives = 116/138 (84%), Gaps = 15/138 (10%) Frame = -2
Query: 369 HATTYRLENTLNYGLERVWTIGYLKSSNR--------------IAIGYDEGTIMIKIGRE 232 HATTYRLENTLNYGLERVW IGY+K S R IAIGYDEGTIMIKIG+E Sbjct: 270 HATTYRLENTLNYGLERVWAIGYIKGSKRQVIYQENHSVPWILIAIGYDEGTIMIKIGKE 329
Query: 231 EPVASMDNSGKIIWAKHNEIQTVNIKSVGLD-EVVDGERLPLAVKELGSCDLYPQSLKHN 55 PVASMD SGKIIWAKHNEIQTVNIK+VG D EV DGERLPLAVKELGSCDLYPQSLKHN Sbjct: 330 APVASMDGSGKIIWAKHNEIQTVNIKAVGADFEVTDGERLPLAVKELGSCDLYPQSLKHN 389
Query: 54 PNGRFVVVCGDGEYIIYT 1 PNGRFVVVCGDGEYIIYT Sbjct: 390 PNGRFVVVCGDGEYIIYT 407
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