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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921818
Clone id YMU001_000154_E07
Library
Length 485
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000154_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCCTCTACCACCAAATTGATACTTAAAAGCTTTTGCGGCTCACTTGGAACCGTTCAGCAT
AAACATGTCAAGCCGAACTCATAAAATGCAAGCCAATCCTCTGCCTCCTCACAATCTGTG
AAAATAGATGGTTGGAATGGCATCACTATTATGAATTTTCCTTCAGCATCCAAAATGTGA
GAACATCACCGCTCGAACTTTAACTCCTTAGCGCACAACTGGCAAATATTGCTCCCCAGC
AGGATCGTCAAAAGATGATGACACCGTGCCCGCACACACACAACCTCTCACCTTAACACA
ACATAAGGAATTCCCCTACTTTCCTCACCTCACACACAACCACTCAAGAGCTTAATGAAA
ATCCTCCCCCAAAACTCAATTCAAGCTCGAAACATATCGAACTAGAAGCCCTTGCCTATA
GACACTACGTAGTGAGTTGAATTGATCAAGGCTTGGAATCACACTCGAATCTCGATGGCT
ACGAA
■■Homology search results ■■ -
sp_hit_id Q4P7F2
Definition sp|Q4P7F2|FES1_USTMA Hsp70 nucleotide exchange factor FES1 OS=Ustilago maydis
Align length 58
Score (bit) 32.3
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921818|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_E07.
         (485 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4P7F2|FES1_USTMA Hsp70 nucleotide exchange factor FES1 OS=Us...    32   1.2  
sp|Q54QR1|LIMA_DICDI LIM domain-containing protein A OS=Dictyost...    31   2.6  
sp|Q5AMR5|GPI14_CANAL GPI mannosyltransferase 1 OS=Candida albic...    31   2.6  
sp|A1CS06|NPL4_ASPCL Nuclear protein localization protein 4 OS=A...    30   4.4  
sp|O46258|HUNB_DROSO Protein hunchback (Fragments) OS=Drosophila...    30   4.4  
sp|O46248|HUNB_DROMM Protein hunchback (Fragments) OS=Drosophila...    30   5.7  
sp|Q5KMN5|YTH1_CRYNE mRNA 3'-end-processing protein YTH1 OS=Cryp...    29   9.8  
sp|A7E369|CC070_BOVIN UPF0524 protein C3orf70 homolog OS=Bos tau...    29   9.8  

>sp|Q4P7F2|FES1_USTMA Hsp70 nucleotide exchange factor FES1
           OS=Ustilago maydis GN=FES1 PE=3 SV=1
          Length = 285

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +3

Query: 234 PQQDRQKMMTPCP-HTHNLSP*HNIRNSPTFLTSHTTTQELNENPPPKLNSSSKHIEL 404
           P   R  + TP P H+H L P      +PT   +  +T  L +NPPP  + S  +  L
Sbjct: 229 PSSPRSSLRTPYPTHSHPLPP------APTATQTRASTSTLPKNPPPPSSPSPPNSHL 280


>sp|Q54QR1|LIMA_DICDI LIM domain-containing protein A
           OS=Dictyostelium discoideum GN=limA PE=2 SV=1
          Length = 1183

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/85 (20%), Positives = 38/85 (44%)
 Frame = +3

Query: 210 SAQLANIAPQQDRQKMMTPCPHTHNLSP*HNIRNSPTFLTSHTTTQELNENPPPKLNSSS 389
           S     + PQQ +Q  ++   H HN +P H+  +  +    H+     +++ P + +   
Sbjct: 741 SQPTTTVQPQQQQQHSLSTVVHPHNATPSHHHHHQHSHSQPHSFDHNQHQHQPLQ-HHHH 799

Query: 390 KHIELEALAYRHYVVS*IDQGLESH 464
            H +  ++ ++H     ID  ++ H
Sbjct: 800 THSQPISIQHQHIENKHIDSPIQHH 824


>sp|Q5AMR5|GPI14_CANAL GPI mannosyltransferase 1 OS=Candida albicans
           GN=GPI14 PE=3 SV=1
          Length = 398

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 75  ELIKCKPILCLLTICENRWLEWHHYYEFSFSIQNVRTSPLEL*LLSAQ 218
           E  +  PIL +L I +N    W+H+ +  F + +V T  + L LLS Q
Sbjct: 58  ETYRYTPILAILLIPDNFGKYWYHFGKLLFMVSDVITGLIILKLLSKQ 105


>sp|A1CS06|NPL4_ASPCL Nuclear protein localization protein 4
           OS=Aspergillus clavatus GN=npl4 PE=3 SV=1
          Length = 674

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = +3

Query: 225 NIAPQQDRQKMMTPCPHTHNLSP*HNIRNSPTFLTSHTTTQELNENPP--PKLNSSSKHI 398
           N+   QD +K++     +H+ +    + N+P + T  T  QE  E PP  P LN +    
Sbjct: 581 NLMTPQDEEKLLCRVATSHDPTEGLKLINTPGWATLVTILQESGERPPKRPWLNPADPPR 640

Query: 399 ELEALAYRH 425
            L     RH
Sbjct: 641 PLSQQGKRH 649


>sp|O46258|HUNB_DROSO Protein hunchback (Fragments) OS=Drosophila
           soonae GN=hb PE=3 SV=2
          Length = 159

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +3

Query: 141 HHYYEFSFSIQNVRTSPLEL*LLSAQLANIAPQQDRQKMM-TPCPHTHNLSP*HNIRNSP 317
           HH ++   +  +  +SP +  L + QL     QQ +Q +M +  P+        N+R SP
Sbjct: 28  HHQHQQRHNSNSNASSPHQSPLPNLQLEQYLKQQQQQPLMWSGLPNPMQTIMPANMRPSP 87

Query: 318 TFLTSHTTTQ 347
           T  T+ TTT+
Sbjct: 88  TAATAATTTE 97


>sp|O46248|HUNB_DROMM Protein hunchback (Fragments) OS=Drosophila
           mimica GN=hb PE=3 SV=2
          Length = 158

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +3

Query: 141 HHYYEFSFSIQNVRTSPLEL*LLSAQLANIAPQQDRQKMMTP-CPHTHNLSP*HNIRNSP 317
           HH ++   +  +  +SP +  L + QL     QQ +Q +M P  P+        N+R SP
Sbjct: 28  HHQHQQRHNSNSNASSPHQSPLPNLQLEQYLKQQQQQPLMPPGLPNPMQTIMPANMRPSP 87

Query: 318 TFLTSHTT 341
           T  T+ TT
Sbjct: 88  TARTTTTT 95


>sp|Q5KMN5|YTH1_CRYNE mRNA 3'-end-processing protein YTH1
           OS=Cryptococcus neoformans GN=YTH1 PE=3 SV=1
          Length = 332

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 333 HTTTQELNENPPPKLNSSSKHIELEALAYRHYV 431
           HTT  +LN  PPP L +  +  E +    +HY+
Sbjct: 71  HTTPSQLNFKPPPPLPAHPREREKKLTVCKHYL 103


>sp|A7E369|CC070_BOVIN UPF0524 protein C3orf70 homolog OS=Bos taurus
           PE=2 SV=2
          Length = 250

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = +3

Query: 264 PCPHTHNLSP*HNIRNSPTFLTSHTTTQELNENPPPKLNSSSKHIELEALAYRHYVVS*I 443
           P PH+H +SP   +     F++  + T +++    P   SSS+   + A+   HYV S  
Sbjct: 150 PAPHSHKMSP-EEVSAHDAFISKESNTPKIDHCSSP---SSSEDSGINAIG-AHYVES-C 203

Query: 444 DQGLESHSNLDGYE 485
           D+  E  + L   E
Sbjct: 204 DEDTEEGAELSSEE 217
tr_hit_id A2QQB0
Definition tr|A2QQB0|A2QQB0_ASPNC Similarity to hypothetical Pto kinase interactor F28B23.17 - Arabidopsis thaliana OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
Align length 59
Score (bit) 33.9
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921818|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_E07.
         (485 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2QQB0|A2QQB0_ASPNC Similarity to hypothetical Pto kinase int...    34   4.1  
tr|Q1MT03|Q1MT03_DANRE Novel protein similar to vertebrate phosp...    33   5.3  
tr|B8E3V5|B8E3V5_9GAMM Putative uncharacterized protein OS=Shewa...    33   9.1  

>tr|A2QQB0|A2QQB0_ASPNC Similarity to hypothetical Pto kinase
           interactor F28B23.17 - Arabidopsis thaliana
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An08g01870 PE=4 SV=1
          Length = 278

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 234 PQQDRQKMMTPCPHTHNLSP*HNIR-NSPTFLTSHTTTQELNENPPPKLNSSSKHIELE 407
           P  D     TP P   + SP H  + + PT   S T TQ L   PP K + +SK+ E E
Sbjct: 127 PPLDSDSSPTPSPPHPDSSPQHQQQTHPPTSPPSKTHTQHLPNPPPTKSSMNSKNYEFE 185


>tr|Q1MT03|Q1MT03_DANRE Novel protein similar to vertebrate
           phosphatase and actin regulator family (Fragment)
           OS=Danio rerio GN=CH211-202B2.1-001 PE=4 SV=1
          Length = 1013

 Score = 33.5 bits (75), Expect = 5.3
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 239 AGSSKDDDTVPAHTQPLTLTQHKEFPYFP-HLT 334
           AG  +   TVPAHT P T++ HK  P  P H+T
Sbjct: 477 AGDREVPPTVPAHTTPATVSTHKTLPTVPAHMT 509


>tr|B8E3V5|B8E3V5_9GAMM Putative uncharacterized protein
           OS=Shewanella baltica OS223 GN=Sbal223_0126 PE=4 SV=1
          Length = 552

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +3

Query: 204 LLSAQLANIAPQQDRQKMMT--PCPHTHNLSP*HNIRNSPTFLTSHTTTQELNENPPPKL 377
           L +A L  + P++  +++M   P  H H+ S  H   +S    TSHT+ Q   E P    
Sbjct: 475 LFAASLLRLGPRKFLRRLMLSKPAAHAHSHSHSHAHGHSHEPSTSHTSVQSTAETPSAH- 533

Query: 378 NSSSKHIELEALAYRH 425
           + S +H   +A A +H
Sbjct: 534 DHSDEHTHDKAKADKH 549