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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921821
Clone id YMU001_000154_E10
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000154_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACATCATCAAGAAAGGCATTGTAGTTTGAGGTATGAAATCATGTAGGACTTTGCTCATA
CCATTCATCATATGTGCAACTGAATTAATTTCTCCCTCTTGAGGTAAGGTCCAAATCCTT
ACCAAACCAAAGGTGTCCTCATGTTAGTCAAATCCCTGCTTTCCATTGCTAGTTGGAACT
GATCATAACCTTAGTACAATCTCTCCTTCCATGGTCAGTACTATCACACCATATGCATCT
ATTTACAAAGCCTTCTCTATTTTGAGGTCTTTTCCCTGTAGATTGACTTGATGGTTGTCC
CTTTTCTTCTAGCCTTTTAAGATTTAACTTTAGCTCTTGCATTCCCTTGACGATATCATC
TAGAGTGGACTTGTTACTCTTTGGAACCACAATAATAGGTTTCATGGGACTCTCAGGAAC
GCTTGGGGCCCATTGAGTAGGGTTAACTATCATCTTGTCACTTGGCTAGCAGTGAAATTG
CATCTTCAACTTCATTC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921821|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_E10.
         (497 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A9SRG5
Definition tr|A9SRG5|A9SRG5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 105
Score (bit) 68.2
E-value 2.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921821|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_E10.
         (497 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SRG5|A9SRG5_PHYPA Predicted protein OS=Physcomitrella paten...    68   2e-10
tr|A9TW93|A9TW93_PHYPA Predicted protein OS=Physcomitrella paten...    65   1e-09
tr|A9TC30|A9TC30_PHYPA Predicted protein OS=Physcomitrella paten...    64   3e-09
tr|A9T9M2|A9T9M2_PHYPA Predicted protein OS=Physcomitrella paten...    61   3e-08
tr|A9TLL2|A9TLL2_PHYPA Predicted protein OS=Physcomitrella paten...    58   2e-07
tr|A9RIH9|A9RIH9_PHYPA Predicted protein OS=Physcomitrella paten...    58   2e-07
tr|A9STR6|A9STR6_PHYPA Predicted protein OS=Physcomitrella paten...    57   4e-07
tr|A9TCS9|A9TCS9_PHYPA Predicted protein OS=Physcomitrella paten...    55   2e-06
tr|A9TJY6|A9TJY6_PHYPA Predicted protein OS=Physcomitrella paten...    54   3e-06
tr|A9RFA7|A9RFA7_PHYPA Predicted protein (Fragment) OS=Physcomit...    52   1e-05
tr|A9TQU7|A9TQU7_PHYPA Predicted protein OS=Physcomitrella paten...    39   4e-05
tr|B3GGB9|B3GGB9_PODAN Gag-pol polyprotein OS=Podospora anserina...    38   7e-05
tr|A9T7S3|A9T7S3_PHYPA Predicted protein OS=Physcomitrella paten...    48   2e-04
tr|A9TJZ0|A9TJZ0_PHYPA Predicted protein OS=Physcomitrella paten...    48   3e-04
tr|A9TZX8|A9TZX8_PHYPA Predicted protein OS=Physcomitrella paten...    47   5e-04
tr|A9S0Q9|A9S0Q9_PHYPA Predicted protein OS=Physcomitrella paten...    47   5e-04
tr|A6SHV6|A6SHV6_BOTFB Putative uncharacterized protein OS=Botry...    34   5e-04
tr|A6RNZ8|A6RNZ8_BOTFB Putative uncharacterized protein OS=Botry...    34   5e-04
tr|A9TSB6|A9TSB6_PHYPA Predicted protein OS=Physcomitrella paten...    47   7e-04
tr|A9TRI0|A9TRI0_PHYPA Predicted protein OS=Physcomitrella paten...    47   7e-04
tr|A9TKE6|A9TKE6_PHYPA Predicted protein OS=Physcomitrella paten...    47   7e-04
tr|A9SEF0|A9SEF0_PHYPA Predicted protein OS=Physcomitrella paten...    47   7e-04
tr|A9RHX3|A9RHX3_PHYPA Predicted protein OS=Physcomitrella paten...    47   7e-04
tr|A9RCF3|A9RCF3_PHYPA Predicted protein OS=Physcomitrella paten...    47   7e-04
tr|A9SII6|A9SII6_PHYPA Predicted protein OS=Physcomitrella paten...    46   9e-04
tr|A9TXC1|A9TXC1_PHYPA Predicted protein OS=Physcomitrella paten...    46   0.001
tr|A9TQX5|A9TQX5_PHYPA Predicted protein OS=Physcomitrella paten...    46   0.001
tr|A9TID4|A9TID4_PHYPA Predicted protein OS=Physcomitrella paten...    46   0.001
tr|A9T9C1|A9T9C1_PHYPA Predicted protein OS=Physcomitrella paten...    46   0.001
tr|A9RUP3|A9RUP3_PHYPA Predicted protein OS=Physcomitrella paten...    46   0.001

>tr|A9SRG5|A9SRG5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_82862 PE=4 SV=1
          Length = 506

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
 Frame = -3

Query: 489 LKMQFHC*PSDKMIVNPTQWAPS-------VPESPMKPIIVVPKSNKSTLDDIVKGMQXX 331
           LK +F    SD++   P Q  PS        P S ++P +   K  ++ +++I++GM+  
Sbjct: 130 LKDEFFLEDSDRVTKRPLQ--PSKIKVSSIYPTSLIQPSMATSKKEETRINEIIRGMRDL 187

Query: 330 XXXXXXXXXKGQPSSQSTGKRPQNREGFVNRCIWCDSTDHGRRDC 196
                    KGQ S  ST +RP+  EG V+RC+WCDS DH RR+C
Sbjct: 188 QIKFAKLEEKGQSSRTSTKQRPRPMEGVVHRCMWCDSIDHSRREC 232


>tr|A9TW93|A9TW93_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_98120 PE=4 SV=1
          Length = 560

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = -3

Query: 417 PESPMKPIIVVPKSNKSTLDDIVKGMQXXXXXXXXXXXKGQPSSQSTGKRPQNREGFVNR 238
           P + ++P +   K  K+ +D+I++GM+           KGQ S  ST +RP+  EG V+R
Sbjct: 245 PTTLIQPSMATSKKEKTGIDEIIRGMRDLQIKFAKLEEKGQSSRISTKQRPRPMEGVVHR 304

Query: 237 CIWCDSTDHGRRDC 196
           C+WCDS DH R++C
Sbjct: 305 CMWCDSIDHSRKEC 318


>tr|A9TC30|A9TC30_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_90813 PE=4 SV=1
          Length = 423

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = -3

Query: 417 PESPMKPIIVVPKSNKSTLDDIVKGMQXXXXXXXXXXXKGQPSSQSTGKRPQNREGFVNR 238
           P S ++P IV  K  ++ +D+I++GM+           KGQ    ST ++P+  EG V+R
Sbjct: 159 PTSLIQPSIVTSKKEETGIDEIIRGMRDLQIKFAKLEEKGQSPRISTKQKPRLMEGVVHR 218

Query: 237 CIWCDSTDHGRRDC 196
           C+WCD+ DH RR+C
Sbjct: 219 CMWCDNIDHSRREC 232


>tr|A9T9M2|A9T9M2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_89886 PE=4 SV=1
          Length = 281

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 29/74 (39%), Positives = 43/74 (58%)
 Frame = -3

Query: 417 PESPMKPIIVVPKSNKSTLDDIVKGMQXXXXXXXXXXXKGQPSSQSTGKRPQNREGFVNR 238
           P S ++P +   K  ++ +D+I+ GM+           KGQ S  ST +RP+  E  V+R
Sbjct: 117 PTSLIQPPMATSKKEETGIDEIICGMRDLQIKFVKLEEKGQSSRISTKQRPRPMEDVVHR 176

Query: 237 CIWCDSTDHGRRDC 196
           C+WCDS DH RR+C
Sbjct: 177 CMWCDSIDHSRREC 190


>tr|A9TLL2|A9TLL2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_94371 PE=4 SV=1
          Length = 250

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 28/74 (37%), Positives = 41/74 (55%)
 Frame = -3

Query: 417 PESPMKPIIVVPKSNKSTLDDIVKGMQXXXXXXXXXXXKGQPSSQSTGKRPQNREGFVNR 238
           P S ++P +   K  +  +D+I+ GM+           KGQ S  ST +R +  EG ++R
Sbjct: 71  PISLIQPSMATTKKEEMRIDEIIHGMRDLQIKFAKLEGKGQSSRISTKQRRRPMEGVLHR 130

Query: 237 CIWCDSTDHGRRDC 196
           C+WCDS DH RR C
Sbjct: 131 CMWCDSIDHSRRKC 144


>tr|A9RIH9|A9RIH9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_66579 PE=4 SV=1
          Length = 440

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/74 (36%), Positives = 43/74 (58%)
 Frame = -3

Query: 417 PESPMKPIIVVPKSNKSTLDDIVKGMQXXXXXXXXXXXKGQPSSQSTGKRPQNREGFVNR 238
           P S ++P +   K  ++ +D+I+ GM+           KGQPS  ST +R +  EG V+R
Sbjct: 151 PTSLIQPSMATSKKEETGIDEIICGMRDLPIKFAKIEEKGQPSRISTKQRSRPMEGVVHR 210

Query: 237 CIWCDSTDHGRRDC 196
           C+WCD+ DH  ++C
Sbjct: 211 CMWCDNIDHLTKEC 224


>tr|A9STR6|A9STR6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_83884 PE=4 SV=1
          Length = 296

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 26/74 (35%), Positives = 41/74 (55%)
 Frame = -3

Query: 417 PESPMKPIIVVPKSNKSTLDDIVKGMQXXXXXXXXXXXKGQPSSQSTGKRPQNREGFVNR 238
           P S ++P +   K  +  +D+I+ GM+           K Q S  ST +RP   EG ++R
Sbjct: 86  PTSLIQPSMATSKKEEMEIDEIIHGMRDLQIKFAKLEEKDQSSRISTKQRPGPIEGVIHR 145

Query: 237 CIWCDSTDHGRRDC 196
           C+WCDS DH +++C
Sbjct: 146 CMWCDSIDHSKKEC 159


>tr|A9TCS9|A9TCS9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_91078 PE=4 SV=1
          Length = 373

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 26/74 (35%), Positives = 41/74 (55%)
 Frame = -3

Query: 417 PESPMKPIIVVPKSNKSTLDDIVKGMQXXXXXXXXXXXKGQPSSQSTGKRPQNREGFVNR 238
           P S ++  +   K  +  +D+I++GM+           KGQ S  S  +RP+   G V+R
Sbjct: 163 PTSLIQSSMATSKKEEIGIDEIIRGMRDLQIKFAKLEEKGQSSRISIKQRPRPMAGVVHR 222

Query: 237 CIWCDSTDHGRRDC 196
           C+WCD+ DH RR+C
Sbjct: 223 CMWCDNIDHLRREC 236


>tr|A9TJY6|A9TJY6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_93740 PE=4 SV=1
          Length = 334

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 25/62 (40%), Positives = 36/62 (58%)
 Frame = -3

Query: 381 KSNKSTLDDIVKGMQXXXXXXXXXXXKGQPSSQSTGKRPQNREGFVNRCIWCDSTDHGRR 202
           K  ++ +D+I+ GM+           KGQ S  S  +RP+  E  V+RC+WCDS DH RR
Sbjct: 5   KKEETEIDEIICGMRDLQIKFVKLEEKGQSSRISIKQRPRPMEDVVHRCMWCDSIDHSRR 64

Query: 201 DC 196
           +C
Sbjct: 65  EC 66


>tr|A9RFA7|A9RFA7_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_113296 PE=4 SV=1
          Length = 52

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = -1

Query: 128 GLVRIWTLPQEGEINSVAHMMNGMSKVLHDFIPQTTMPFL 9
           GLVR+ TLPQ G  NS+ HMMN M+KVL DFI + TMPFL
Sbjct: 9   GLVRMCTLPQ-GATNSIMHMMNEMNKVLRDFILKKTMPFL 47