BP921827 |
Clone id |
YMU001_000154_F05 |
Library |
YMU01 |
Length |
377 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000154_F05. |
Accession |
BP921827 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGGGCACGGAAGCTTTGCAACATTTTTGGGTGCATTCAGTTGCAGCGGTTCTATTGATGG GCCATGGGCAACAAATTCTTGGGATATTGAGAGTTTGATTGATTGTTTATGTGAAGCTGC GCCTGGAACAGATTGGGGATCGGTGGTAGATAATTTTGATCACGAGGGCTTCTACATGCC AGATCAGAAGGCTTTCAATCTTTTAATGGGGATTTATGGGATGGCTTGCAAGGATCCCTT TCCAATTGAGAGGATTTGTAGTGGCCTTTGGAAGAATACAGAAGGTCAAATTTCATTCTT AAGATATGCAGTTTTGGCCTCTCCTGACATCTTGCAGTTTAAGAGATCATACTCGGGGCA GTTTCCTCTAGAAAATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A5YKK6 |
Definition |
sp|A5YKK6|CNOT1_HUMAN CCR4-NOT transcription complex subunit 1 OS=Homo sapiens |
Align length |
96 |
Score (bit) |
56.2 |
E-value |
5.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q94LQ9 |
Definition |
tr|Q94LQ9|Q94LQ9_ORYSJ Putative transcription regulatory protein (Transcriptional regulator, putative, expressed) OS=Oryza sativa subsp. japonica |
Align length |
113 |
Score (bit) |
124.0 |
E-value |
2.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921827|Adiantum capillus-veneris mRNA, clone: YMU001_000154_F05. (377 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q94LQ9|Q94LQ9_ORYSJ Putative transcription regulatory protein... 124 2e-27 tr|Q7XC99|Q7XC99_ORYSJ Transcriptional regulator, putative, expr... 124 2e-27 tr|Q108Z7|Q108Z7_ORYSJ Transcriptional regulator, putative, expr... 124 2e-27 tr|Q0IVS3|Q0IVS3_ORYSJ Os10g0556700 protein OS=Oryza sativa subs... 124 2e-27 tr|B8BI67|B8BI67_ORYSI Putative uncharacterized protein OS=Oryza... 124 2e-27 tr|A3C781|A3C781_ORYSJ Putative uncharacterized protein OS=Oryza... 124 2e-27 tr|A9SJI9|A9SJI9_PHYPA Predicted protein OS=Physcomitrella paten... 123 5e-27 tr|A7Q543|A7Q543_VITVI Chromosome undetermined scaffold_51, whol... 115 8e-25 tr|A5C3K2|A5C3K2_VITVI Putative uncharacterized protein OS=Vitis... 115 8e-25 tr|Q10T37|Q10T37_ORYSJ Os03g0102300 protein OS=Oryza sativa subs... 111 2e-23 tr|B8AL11|B8AL11_ORYSI Putative uncharacterized protein OS=Oryza... 111 2e-23 tr|A7PKH9|A7PKH9_VITVI Chromosome chr15 scaffold_19, whole genom... 111 2e-23 tr|A5AU62|A5AU62_VITVI Putative uncharacterized protein OS=Vitis... 111 2e-23 tr|A3AD68|A3AD68_ORYSJ Putative uncharacterized protein OS=Oryza... 111 2e-23 tr|A9S1J5|A9S1J5_PHYPA Predicted protein OS=Physcomitrella paten... 107 2e-22 tr|A9S705|A9S705_PHYPA Predicted protein OS=Physcomitrella paten... 96 9e-19 tr|B3RV73|B3RV73_TRIAD Putative uncharacterized protein (Fragmen... 66 1e-09 tr|Q675Q0|Q675Q0_OIKDI KIAA1007 protein-like protein OS=Oikopleu... 62 2e-08 tr|B6LB95|B6LB95_BRAFL Putative uncharacterized protein OS=Branc... 61 2e-08 tr|A7RRG5|A7RRG5_NEMVE Predicted protein OS=Nematostella vectens... 56 8e-07 tr|B7ZWL1|B7ZWL1_MOUSE Putative uncharacterized protein OS=Mus m... 55 2e-06 tr|B4F783|B4F783_RAT Putative uncharacterized protein (Fragment)... 55 2e-06 tr|B2RY28|B2RY28_MOUSE Cnot1 protein OS=Mus musculus GN=Cnot1 PE... 55 2e-06 tr|B2RXR3|B2RXR3_MOUSE Cnot1 protein OS=Mus musculus GN=Cnot1 PE... 55 2e-06 tr|B4MQ45|B4MQ45_DROWI GK21492 OS=Drosophila willistoni GN=GK214... 55 2e-06 tr|B4KRA1|B4KRA1_DROMO GI19666 OS=Drosophila mojavensis GN=GI196... 53 7e-06 tr|Q4RGW4|Q4RGW4_TETNG Chromosome undetermined SCAF15090, whole ... 53 9e-06 tr|B4MFI7|B4MFI7_DROVI GJ15030 OS=Drosophila virilis GN=GJ15030 ... 52 2e-05 tr|Q172M3|Q172M3_AEDAE Ccr4-not transcription complex OS=Aedes a... 51 2e-05 tr|Q16I78|Q16I78_AEDAE Ccr4-not transcription complex (Fragment)... 51 2e-05
>tr|Q94LQ9|Q94LQ9_ORYSJ Putative transcription regulatory protein (Transcriptional regulator, putative, expressed) OS=Oryza sativa subsp. japonica GN=OSJNBa0010C11.3 PE=4 SV=1 Length = 2363
Score = 124 bits (312), Expect = 2e-27 Identities = 58/113 (51%), Positives = 77/113 (68%) Frame = +2
Query: 5 HGSFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPD 184 H +++TF+ A S D T +W+I+ L+D + E AP T+W +VV+N DHEGF +PD Sbjct: 287 HNTYSTFMSAVGNSQPSDSSQFT-AWNIDVLVDSINEIAPRTNWITVVENLDHEGFCIPD 345
Query: 185 QKAFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQFK 343 + AF LLM IY ACKDPFP+ +C LWKNTEGQ+SFL++AV A D FK Sbjct: 346 EAAFCLLMSIYSRACKDPFPLHAVCGSLWKNTEGQLSFLKHAVAAPTDTFTFK 398
>tr|Q7XC99|Q7XC99_ORYSJ Transcriptional regulator, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g40780 PE=4 SV=2 Length = 2406
Score = 124 bits (312), Expect = 2e-27 Identities = 58/113 (51%), Positives = 77/113 (68%) Frame = +2
Query: 5 HGSFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPD 184 H +++TF+ A S D T +W+I+ L+D + E AP T+W +VV+N DHEGF +PD Sbjct: 287 HNTYSTFMSAVGNSQPSDSSQFT-AWNIDVLVDSINEIAPRTNWITVVENLDHEGFCIPD 345
Query: 185 QKAFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQFK 343 + AF LLM IY ACKDPFP+ +C LWKNTEGQ+SFL++AV A D FK Sbjct: 346 EAAFCLLMSIYSRACKDPFPLHAVCGSLWKNTEGQLSFLKHAVAAPTDTFTFK 398
>tr|Q108Z7|Q108Z7_ORYSJ Transcriptional regulator, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g40780 PE=4 SV=1 Length = 2298
Score = 124 bits (312), Expect = 2e-27 Identities = 58/113 (51%), Positives = 77/113 (68%) Frame = +2
Query: 5 HGSFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPD 184 H +++TF+ A S D T +W+I+ L+D + E AP T+W +VV+N DHEGF +PD Sbjct: 287 HNTYSTFMSAVGNSQPSDSSQFT-AWNIDVLVDSINEIAPRTNWITVVENLDHEGFCIPD 345
Query: 185 QKAFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQFK 343 + AF LLM IY ACKDPFP+ +C LWKNTEGQ+SFL++AV A D FK Sbjct: 346 EAAFCLLMSIYSRACKDPFPLHAVCGSLWKNTEGQLSFLKHAVAAPTDTFTFK 398
>tr|Q0IVS3|Q0IVS3_ORYSJ Os10g0556700 protein OS=Oryza sativa subsp. japonica GN=Os10g0556700 PE=4 SV=1 Length = 691
Score = 124 bits (312), Expect = 2e-27 Identities = 58/113 (51%), Positives = 77/113 (68%) Frame = +2
Query: 5 HGSFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPD 184 H +++TF+ A S D T +W+I+ L+D + E AP T+W +VV+N DHEGF +PD Sbjct: 317 HNTYSTFMSAVGNSQPSDSSQFT-AWNIDVLVDSINEIAPRTNWITVVENLDHEGFCIPD 375
Query: 185 QKAFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQFK 343 + AF LLM IY ACKDPFP+ +C LWKNTEGQ+SFL++AV A D FK Sbjct: 376 EAAFCLLMSIYSRACKDPFPLHAVCGSLWKNTEGQLSFLKHAVAAPTDTFTFK 428
>tr|B8BI67|B8BI67_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34610 PE=4 SV=1 Length = 2367
Score = 124 bits (312), Expect = 2e-27 Identities = 58/113 (51%), Positives = 77/113 (68%) Frame = +2
Query: 5 HGSFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPD 184 H +++TF+ A S D T +W+I+ L+D + E AP T+W +VV+N DHEGF +PD Sbjct: 287 HNTYSTFMSAVGNSQPSDSSQFT-AWNIDVLVDSINEIAPRTNWITVVENLDHEGFCIPD 345
Query: 185 QKAFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQFK 343 + AF LLM IY ACKDPFP+ +C LWKNTEGQ+SFL++AV A D FK Sbjct: 346 EAAFCLLMSIYSRACKDPFPLHAVCGSLWKNTEGQLSFLKHAVAAPTDTFTFK 398
>tr|A3C781|A3C781_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031153 PE=4 SV=1 Length = 2477
Score = 124 bits (312), Expect = 2e-27 Identities = 58/113 (51%), Positives = 77/113 (68%) Frame = +2
Query: 5 HGSFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPD 184 H +++TF+ A S D T +W+I+ L+D + E AP T+W +VV+N DHEGF +PD Sbjct: 401 HNTYSTFMSAVGNSQPSDSSQFT-AWNIDVLVDSINEIAPRTNWITVVENLDHEGFCIPD 459
Query: 185 QKAFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQFK 343 + AF LLM IY ACKDPFP+ +C LWKNTEGQ+SFL++AV A D FK Sbjct: 460 EAAFCLLMSIYSRACKDPFPLHAVCGSLWKNTEGQLSFLKHAVAAPTDTFTFK 512
>tr|A9SJI9|A9SJI9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_130996 PE=4 SV=1 Length = 2335
Score = 123 bits (308), Expect = 5e-27 Identities = 53/118 (44%), Positives = 78/118 (66%) Frame = +2
Query: 8 GSFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPDQ 187 G+ +TF A + W T +WD++ L+D + + APG W V++ DHEGF +PDQ Sbjct: 265 GTHSTFCTALCNDEQVSSDWLT-TWDVDVLVDSIKQLAPGLSWEVVIEKLDHEGFLLPDQ 323
Query: 188 KAFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQFKRSYSGQ 361 KAF+LL+ +YG AC+DPFP+E +C +W+N EGQ+SFL++AV A P++ F S Q Sbjct: 324 KAFSLLLRMYGKACQDPFPLEAVCGHVWQNGEGQLSFLKHAVSAPPELFTFAHSLRKQ 381
>tr|A7Q543|A7Q543_VITVI Chromosome undetermined scaffold_51, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029978001 PE=4 SV=1 Length = 1382
Score = 115 bits (289), Expect = 8e-25 Identities = 50/113 (44%), Positives = 71/113 (62%) Frame = +2
Query: 11 SFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPDQK 190 S++TF A S D + W+++ L+D + + APG +W V++N DHEGFY P++ Sbjct: 257 SYSTFCSAIGSSALSDSS-CLSCWNVDVLVDSIKQLAPGINWTLVMENLDHEGFYFPNEG 315
Query: 191 AFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQFKRS 349 AF+ M IY AC+DPFP+ +C +W N +GQISFLRYAV A P+ F S Sbjct: 316 AFSFFMSIYARACQDPFPLHAVCGSVWNNVDGQISFLRYAVAAPPETFTFAHS 368
>tr|A5C3K2|A5C3K2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027757 PE=4 SV=1 Length = 994
Score = 115 bits (289), Expect = 8e-25 Identities = 50/113 (44%), Positives = 71/113 (62%) Frame = +2
Query: 11 SFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPDQK 190 S++TF A S D + W+++ L+D + + APG +W V++N DHEGFY P++ Sbjct: 230 SYSTFCSAIGSSALSDSS-CLSCWNVDVLVDSIKQLAPGINWTLVMENLDHEGFYFPNEG 288
Query: 191 AFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQFKRS 349 AF+ M IY AC+DPFP+ +C +W N +GQISFLRYAV A P+ F S Sbjct: 289 AFSFFMSIYARACQDPFPLHAVCGSVWNNVDGQISFLRYAVAAPPETFTFAHS 341
>tr|Q10T37|Q10T37_ORYSJ Os03g0102300 protein OS=Oryza sativa subsp. japonica GN=Os03g0102300 PE=4 SV=1 Length = 1759
Score = 111 bits (278), Expect = 2e-23 Identities = 53/112 (47%), Positives = 71/112 (63%) Frame = +2
Query: 5 HGSFATFLGAFSCSGSIDGPWATNSWDIESLIDCLCEAAPGTDWGSVVDNFDHEGFYMPD 184 H ++A F+ A S D P T +W+ + L+D + E AP T+W V++N DHEGF +PD Sbjct: 312 HNTYAMFVSAISNMN--DSPQLT-TWNTDVLVDSINELAPSTNWVHVMENLDHEGFNVPD 368
Query: 185 QKAFNLLMGIYGMACKDPFPIERICSGLWKNTEGQISFLRYAVLASPDILQF 340 + AF LLM IY CK+PFP+ +C LW NTEGQISFL++AV D F Sbjct: 369 EAAFCLLMSIYAHPCKEPFPLHAVCGSLWTNTEGQISFLKHAVSVPTDTFTF 420
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