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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921841
Clone id YMU001_000154_G07
Library
Length 263
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000154_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGTCGGCAATAGGCGTATAGTTTATTTGCTGCCTCGCTACCGTGAGTCCGGTGGCCCCAT
CTTAGCCAACACCGTTTAATGAGCAGAAGCATGTGCATAATCACTCTCCGAGCATACCCA
TTATCATCATTGACCTCGCATTTTGTTGTCGTGGCTCCAATTCAAGCAACTAGCCAAACA
AAGCAACTCGAATAAGACATGGGTTGGTGCTCACCAAAGCCCGCCTGCTCGCAATACGGG
TCGTGCATTACATTAGTCACCAG
■■Homology search results ■■ -
sp_hit_id P75251
Definition sp|P75251|Y527_MYCPN Uncharacterized protein MG350.1 homolog OS=Mycoplasma pneumoniae
Align length 43
Score (bit) 28.9
E-value 8.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921841|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_G07.
         (263 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P75251|Y527_MYCPN Uncharacterized protein MG350.1 homolog OS=...    29   8.5  

>sp|P75251|Y527_MYCPN Uncharacterized protein MG350.1 homolog
           OS=Mycoplasma pneumoniae GN=MPN_527 PE=4 SV=1
          Length = 225

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 52  WPHLSQHRLMSRSMCIITLRAYPLSSLTSHFVVVAPIQATSQT 180
           WP   QH+L + S   + L    ++S  SHF+ +  + A   T
Sbjct: 9   WPKKEQHQLFNLSFSAMMLALALIASFVSHFISIPFLSALKLT 51
tr_hit_id A4CQE9
Definition tr|A4CQE9|A4CQE9_SYNPV Putative uncharacterized protein OS=Synechococcus sp. (strain WH7805)
Align length 45
Score (bit) 32.7
E-value 9.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921841|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_G07.
         (263 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4CQE9|A4CQE9_SYNPV Putative uncharacterized protein OS=Synec...    33   9.2  

>tr|A4CQE9|A4CQE9_SYNPV Putative uncharacterized protein
           OS=Synechococcus sp. (strain WH7805) GN=WH7805_11238
           PE=4 SV=1
          Length = 698

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -1

Query: 182 FVWLVA*I--GATTTKCEVNDDNGYARRVIMHMLLLIKRCWLRWG 54
           +VWLV  +  G   T    N D+ Y   ++  +LLL+ R WL+WG
Sbjct: 317 WVWLVGMLVLGWLFTNLSPNKDSRYIAPLLPLLLLLLSRGWLQWG 361