BP921842 [AcEST]

BP921842
Clone id	YMU001_000154_G08
Library	YMU01
Length	476
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000154_G08.
Accession	BP921842
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	TTTTGTTTTTTTTTTTTTAAACATAACACCAAGAATTCATGTCAAATTGCTCCAAAAACA TTCATGTACAATGAAATAAGAGGTCCCATTACCGAGATTGAAATTTTAAAAAATGGCTAT GATACATGGATTTCAATGGATATATTATCTACGACATTTCCAAGCCTCATTGAAGGTTAT GGATGCTGAGTTCCATACGAAGGCCGGGTTCAGCAATTGAAGTTCAGGAATGCGCAGGGC ATTGTCTCTTTTATCACTGTGAGAAGCCCCAGGTCCGTCGCTAGCAGTTTTTCATGTTCT TTCAGCATAAGCGTATGCTTCCCATAGATCATCTAGTTTGTATTCAAGGCACTACCTAGA GATATCCGTTTACCCACCGCAATTGCCATCAATCACAAGTACACCAAACTCCGCTTCGAA TCGTTTAAATGTTGTCTTGAGCATCTTCTGCATCCGCCTCAAAGTCTGGCTCCTTT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921842\|Adiantum capillus-veneris mRNA, clone: YMU001_000154_G08. (458 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B8C3N3
Definition	tr\|B8C3N3\|B8C3N3_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335
Align length	48
Score (bit)	35.0
E-value	1.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921842\|Adiantum capillus-veneris mRNA, clone: YMU001_000154_G08. (458 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B8C3N3\|B8C3N3_THAPS Predicted protein OS=Thalassiosira pseudo... 35 1.9 >tr\|B8C3N3\|B8C3N3_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_22874 PE=4 SV=1 Length = 1085 Score = 35.0 bits (79), Expect = 1.9 Identities = 15/48 (31%), Positives = 29/48 (60%) Frame = +1 Query: 7 NTKNSCQIAPKTFMYNEIRGPITEIEILKNGYDTWISMDILSTTFPSL 150 N N+C+ + FM+ + G +T IE +++G + + + + ST+ PSL Sbjct: 490 NRSNACEKEDRNFMFYGVDGDLTSIESVEDGDEKKLLLSVKSTSKPSL 537