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NBDC - LSDB Archive
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BP921854
Clone id YMU001_000154_H11
Library
Length 487
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000154_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCTCCTTGGGCTTATCAAGACGCCGGAAGTGCACTACTTGCCGATAGTTTACGTAATCCA
GGAAGGACGGGACATCTGGATAACGATACTGATGCAAATTCTCTCGAGTCAACGCCTTTT
GAAAGCAAATAATATCTCCATCCTCTAGCTGGCTTGCTCTGAATGTTGCTCTCTTCTCAA
CAGGTACACACATGACATTTGGCTCAAACTTAATCTCCTCAAACAATTGAATCTCCTCGT
GAGGTTCAAACCCAGCCATTTCATTAAGTTTATCCAGAATGTCTCCTGGCTTACCACTTG
CCTTCACAAATGTTCGTCCAACATAGCGTAGCTCTTCTTTCTCTGGATCATAGAGCTTGA
AAAACAATAAAATGTCATCTTTCACCTTCTCATATAAAGAACAAAGTCCCCGAGAATCTT
GATCAGGAAGGACTTCCAAGAAAAGCTTGAGTTCAGCGTTATGGGCTTTATTTACTACTT
CCTTCAA
■■Homology search results ■■ -
sp_hit_id Q84WU2
Definition sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
Align length 162
Score (bit) 192.0
E-value 9.0e-49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921854|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_H11.
         (487 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 O...   192   9e-49
sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 O...   182   7e-46
sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=...    59   1e-08
sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Ra...    57   4e-08
sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=...    57   4e-08
sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=...    57   4e-08
sp|Q09879|UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrol...    49   1e-05
sp|Q9VYQ8|UBP7_DROME Ubiquitin carboxyl-terminal hydrolase 7 OS=...    47   4e-05
sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 O...    46   8e-05
sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 O...    38   0.028
sp|P33459|POL_CAEVC Pol polyprotein OS=Caprine arthritis encepha...    35   0.24 
sp|Q02AL2|EFTS_SOLUE Elongation factor Ts OS=Solibacter usitatus...    33   0.90 
sp|Q8AYS7|CENPI_CHICK Centromere protein I OS=Gallus gallus GN=C...    32   1.2  
sp|P33801|VPK2_VARV Serine/threonine-protein kinase 2 OS=Variola...    32   2.0  
sp|P29144|TPP2_HUMAN Tripeptidyl-peptidase 2 OS=Homo sapiens GN=...    31   2.6  
sp|A5PK39|TPP2_BOVIN Tripeptidyl-peptidase 2 OS=Bos taurus GN=TP...    31   2.6  
sp|Q9V4W1|GLE1_DROME Nucleoporin GLE1 OS=Drosophila melanogaster...    31   2.6  
sp|Q89121|VPK2_VACCW Serine/threonine-protein kinase 2 OS=Vaccin...    31   3.4  
sp|Q9JFE5|VPK2_VACCT Serine/threonine-protein kinase 2 OS=Vaccin...    31   3.4  
sp|P21095|VPK2_VACCC Serine/threonine-protein kinase 2 OS=Vaccin...    31   3.4  
sp|O57177|VPK2_VACCA Serine/threonine-protein kinase 2 OS=Vaccin...    31   3.4  
sp|Q64560|TPP2_RAT Tripeptidyl-peptidase 2 OS=Rattus norvegicus ...    31   3.4  
sp|Q64514|TPP2_MOUSE Tripeptidyl-peptidase 2 OS=Mus musculus GN=...    31   3.4  
sp|Q9LXQ8|FBL60_ARATH F-box/LRR-repeat protein At3g58940 OS=Arab...    31   3.4  
sp|P29884|VPK2_VACCP Serine/threonine-protein kinase 2 OS=Vaccin...    30   5.8  
sp|Q8TXB7|SYE_METKA Glutamyl-tRNA synthetase OS=Methanopyrus kan...    30   5.8  
sp|Q97UB2|ILVD_SULSO Dihydroxy-acid dehydratase OS=Sulfolobus so...    30   5.8  
sp|Q63517|CENPI_RAT Centromere protein I OS=Rattus norvegicus GN...    30   5.8  
sp|Q8K1K4|CENPI_MOUSE Centromere protein I OS=Mus musculus GN=Ce...    30   5.8  
sp|Q7JKC3|UBP7_CAEEL Ubiquitin carboxyl-terminal hydrolase 7 OS=...    30   7.6  

>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13
            OS=Arabidopsis thaliana GN=UBP13 PE=1 SV=1
          Length = 1115

 Score =  192 bits (487), Expect = 9e-49
 Identities = 98/162 (60%), Positives = 122/162 (75%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
            ++E  NKA+NAELKLFLE+    D   +    EK  +DILLFFKLYDPE   LRYVGR  
Sbjct: 654  IREASNKANNAELKLFLEIERGPDDLPIPPP-EKTSEDILLFFKLYDPENAVLRYVGRLM 712

Query: 307  VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
            VK+S KP DI+ +LN+MAGF P EEI+LFEEIKFEP VMC  ++K+ +FR  Q+EDGDII
Sbjct: 713  VKSSSKPMDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDII 772

Query: 127  CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            C+QK L+ E   ++RYPDVPSFL+YV  R++V FR L+KPKE
Sbjct: 773  CYQKPLSIEE-SEFRYPDVPSFLEYVQNRELVRFRTLEKPKE 813


>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12
            OS=Arabidopsis thaliana GN=UBP12 PE=2 SV=2
          Length = 1116

 Score =  182 bits (462), Expect = 7e-46
 Identities = 99/162 (61%), Positives = 117/162 (72%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
            ++E  NKA+ AELKLFLEV    D R +    EK K+DILLFFKLYDPEK  L Y GR  
Sbjct: 656  IREASNKANTAELKLFLEV-EHLDLRPIPPP-EKSKEDILLFFKLYDPEKAVLSYAGRLM 713

Query: 307  VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
            VK+S KP DI  KLNEM GF P EEI+LFEEIKFEP VMC  ++K+ +FR  Q+EDGDII
Sbjct: 714  VKSSSKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDII 773

Query: 127  CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            CFQK L  + + +  YP VPSFL+YV  RQ+V FR L+KPKE
Sbjct: 774  CFQKPLVNKEI-ECLYPAVPSFLEYVQNRQLVRFRALEKPKE 814


>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7
           OS=Gallus gallus GN=USP7 PE=2 SV=1
          Length = 1101

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = -1

Query: 445 LFLEVLPDQDSRGLCSLYEKVKD-DILLFFKLYDPEKEELRYVGRTFVKASGKPGDILDK 269
           +FLE +  + +    +L +  KD D++LF K+YDP+   L Y G  +   S K  D+L  
Sbjct: 660 IFLETVDPEMAATGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPV 719

Query: 268 LNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDIICFQK 116
           + E AGF     + L+EE+K          +        +L DGDII FQK
Sbjct: 720 MCERAGFPQETNLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQK 770


>sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7
           OS=Rattus norvegicus GN=Usp7 PE=1 SV=1
          Length = 1103

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = -1

Query: 445 LFLEVLPDQDSRGLCSLYEKVKD-DILLFFKLYDPEKEELRYVGRTFVKASGKPGDILDK 269
           +FLE +  + +    +L +  KD D++LF K+YDP+   L Y G  +   S K  D+L  
Sbjct: 661 IFLETVDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPV 720

Query: 268 LNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDIICFQK 116
           + + AGF     + L+EE+K          +        +L DGDII FQK
Sbjct: 721 MCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQK 771


>sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus
           musculus GN=Usp7 PE=1 SV=1
          Length = 1103

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = -1

Query: 445 LFLEVLPDQDSRGLCSLYEKVKD-DILLFFKLYDPEKEELRYVGRTFVKASGKPGDILDK 269
           +FLE +  + +    +L +  KD D++LF K+YDP+   L Y G  +   S K  D+L  
Sbjct: 661 IFLETVDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPV 720

Query: 268 LNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDIICFQK 116
           + + AGF     + L+EE+K          +        +L DGDII FQK
Sbjct: 721 MCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQK 771


>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7
           OS=Homo sapiens GN=USP7 PE=1 SV=2
          Length = 1102

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = -1

Query: 445 LFLEVLPDQDSRGLCSLYEKVKD-DILLFFKLYDPEKEELRYVGRTFVKASGKPGDILDK 269
           +FLE +  + +    +L +  KD D++LF K+YDP+   L Y G  +   S K  D+L  
Sbjct: 660 IFLETVDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPV 719

Query: 268 LNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDIICFQK 116
           + + AGF     + L+EE+K          +        +L DGDII FQK
Sbjct: 720 MCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQK 770


>sp|Q09879|UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 5
            OS=Schizosaccharomyces pombe GN=ubp5 PE=2 SV=3
          Length = 1108

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
 Frame = -1

Query: 451  LKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTFVKASGKPGDILD 272
            L+L+LE+ P+ +     +     + +  +F K +D + +E+   G   V  S +   I  
Sbjct: 671  LRLYLEITPENELSSSLTHQNTGEWNAFIFVKYFDRKSQEISGCGTLHVNKSDEIRSICP 730

Query: 271  KLNEMAGFEPHEEIQLFEEIKFEPNVM-CVPVEKRATFRASQLEDGDIICFQ---KALTR 104
             L E A    +  + ++EEIK  P ++  + +EK  TF  S+L  GDIICF+    +   
Sbjct: 731  LLCERANLPKNTPLNIYEEIK--PGMVDFLRLEK--TFTQSELSTGDIICFEPCRPSALE 786

Query: 103  ENLHQYRYPDVPSFLDYVNYRQVVHFR 23
            +++    +       D+++ + +V FR
Sbjct: 787  DDIVNSGFDSALKLYDFLSNKVLVLFR 813


>sp|Q9VYQ8|UBP7_DROME Ubiquitin carboxyl-terminal hydrolase 7
            OS=Drosophila melanogaster GN=Usp7 PE=1 SV=1
          Length = 1129

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
 Frame = -1

Query: 382  KDDILLFFKLYDPEKEELRYVGRTFVKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFE 203
            K + LLF K YDP  + L Y+G T    + +  D++  +N   GFEP  E+ +++E   +
Sbjct: 704  KTESLLFLKYYDPRNKRLNYIGCTQQPHTRRLIDLVPDVNSKLGFEPDTELTIYDEYADK 763

Query: 202  PNVMCVPVEKRATFRASQLEDGDIICFQKALTRENLHQYRYPDVPSFLDY---VNYRQVV 32
              V      + A F       G I+ F+    REN+      D+P+  DY   + YR  +
Sbjct: 764  KLVNLNEPIESALFIPQDHLQGHILIFE----RENVDAKL--DLPTVGDYFLDLVYRIEI 817

Query: 31   HFRRLDKPKE 2
             F     P E
Sbjct: 818  IFSDKCNPNE 827


>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21
            OS=Schizosaccharomyces pombe GN=ubp21 PE=2 SV=2
          Length = 1129

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
 Frame = -1

Query: 376  DILLFFKLYDPEKEELRYVGRTFVKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPN 197
            D  +F K++D E +++  +    V  +     + + + E   +     I  +EEIK    
Sbjct: 714  DTYIFLKIFDYETQQISGLADLHVSKNSPISSLSEWIREHLKWSSDVPITYYEEIK---T 770

Query: 196  VMCVPVEKRATFRASQLEDGDIICFQKALTRENLH--QYRYPDVPSFLDYVNYRQVVHF 26
             M   ++  A+F  S+++ GDIICF+K L  ++     + Y       D++ +R V+ F
Sbjct: 771  GMVDVLDPNASFEKSEIQVGDIICFEKKLVHDSSSDTSHPYKSALDLYDFMAHRVVITF 829


>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15
            OS=Saccharomyces cerevisiae GN=UBP15 PE=1 SV=1
          Length = 1230

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
 Frame = -1

Query: 430  LPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTFVKASGKPGDILDKLNEMAG 251
            LP+    G+  ++       LLF K YDP  ++L   G   V    +  DI   + +   
Sbjct: 754  LPELTKGGIEPVFATDNKSNLLFVKSYDPHTQKLLGFGHFAVNQLQQLSDISAIIED--S 811

Query: 250  FEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDIICFQ--KALTRENLHQYRYP 77
               +E++  +EE+  +P  +   +  + T   + ++ GDI+ F+   A+  +      Y 
Sbjct: 812  ISSNEKLTFYEEV--QPGTI-NEIYMKETIYDADIDTGDIVSFEVPGAVLPDTFPV--YA 866

Query: 76   DVPSFLDYVNYRQVVHFRRLDKPKE 2
             +  F  Y+ YR  + F + D   E
Sbjct: 867  TIKDFYSYLRYRVKLKFSKFDGSSE 891


  Database: uniprot_sprot.fasta
    Posted date:  Mar 25, 2009  6:19 PM
  Number of letters in database: 148,809,765
  Number of sequences in database:  412,525
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 412525
Number of Hits to DB: 4,092,564,643,277
Number of extensions: 499784386
Number of successful extensions: 234399196
Number of sequences better than 10.0: 4153549
Number of HSP's gapped: 230898358
Number of HSP's successfully gapped: 5363800
Length of database: 148,809,765
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
tr_hit_id A9SVA0
Definition tr|A9SVA0|A9SVA0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 166
Score (bit) 231.0
E-value 1.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921854|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_H11.
         (487 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SVA0|A9SVA0_PHYPA Predicted protein OS=Physcomitrella paten...   231   1e-59
tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein OS=Lotus japonicus ...   230   2e-59
tr|A9S238|A9S238_PHYPA Predicted protein OS=Physcomitrella paten...   230   3e-59
tr|Q2QQM3|Q2QQM3_ORYSJ Ubiquitin-specific protease 12, putative,...   223   3e-57
tr|A3CHF8|A3CHF8_ORYSJ Putative uncharacterized protein OS=Oryza...   223   3e-57
tr|B8BPQ2|B8BPQ2_ORYSI Putative uncharacterized protein OS=Oryza...   223   4e-57
tr|Q0IS23|Q0IS23_ORYSJ Os11g0573000 protein (Fragment) OS=Oryza ...   222   8e-57
tr|A7QNS3|A7QNS3_VITVI Chromosome undetermined scaffold_134, who...   221   2e-56
tr|Q0D8F5|Q0D8F5_ORYSJ Os07g0163800 protein OS=Oryza sativa subs...   220   3e-56
tr|B8B7K1|B8B7K1_ORYSI Putative uncharacterized protein OS=Oryza...   220   3e-56
tr|B6V765|B6V765_TOBAC Ubiquitin specific protease 12 OS=Nicotia...   218   2e-55
tr|A7PGA4|A7PGA4_VITVI Chromosome chr6 scaffold_15, whole genome...   217   3e-55
tr|A5BSR9|A5BSR9_VITVI Putative uncharacterized protein OS=Vitis...   217   3e-55
tr|A9SQD0|A9SQD0_PHYPA Predicted protein OS=Physcomitrella paten...   209   6e-53
tr|A7Q028|A7Q028_VITVI Chromosome chr8 scaffold_41, whole genome...   208   1e-52
tr|Q2R2A3|Q2R2A3_ORYSJ Ubiquitin carboxyl-terminal hydrolase fam...   208   1e-52
tr|A3CCI4|A3CCI4_ORYSJ Putative uncharacterized protein OS=Oryza...   208   1e-52
tr|Q7EZJ0|Q7EZJ0_ORYSJ Putative ubiquitin-specific protease OS=O...   206   6e-52
tr|A2ZFJ8|A2ZFJ8_ORYSI Putative uncharacterized protein OS=Oryza...   200   3e-50
tr|Q94ED6|Q94ED6_ORYSJ Ubiquitin carboxyl-terminal hydrolase OS=...   196   6e-49
tr|Q0JIX9|Q0JIX9_ORYSJ Ubiquitin carboxyl-terminal hydrolase OS=...   185   9e-46
tr|B8AA55|B8AA55_ORYSI Putative uncharacterized protein OS=Oryza...   185   9e-46
tr|A3BGV1|A3BGV1_ORYSJ Putative uncharacterized protein OS=Oryza...   177   3e-43
tr|A5CAP4|A5CAP4_VITVI Putative uncharacterized protein OS=Vitis...    98   2e-19
tr|B7P3R8|B7P3R8_IXOSC Ubiquitin carboxyl-terminal hydrolase, pu...    81   2e-14
tr|A8QC24|A8QC24_MALGO Ubiquitin carboxyl-terminal hydrolase OS=...    79   9e-14
tr|B0CS91|B0CS91_LACBS Ubiquitin carboxyl-terminal hydrolase OS=...    78   3e-13
tr|Q4PB74|Q4PB74_USTMA Ubiquitin carboxyl-terminal hydrolase OS=...    77   3e-13
tr|Q2QD24|Q2QD24_ORYSI Putative ubiquitin protease (Fragment) OS...    74   4e-12
tr|A8NFU0|A8NFU0_COPC7 Ubiquitin carboxyl-terminal hydrolase OS=...    73   6e-12

>tr|A9SVA0|A9SVA0_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_216093 PE=4 SV=1
          Length = 1123

 Score =  231 bits (590), Expect = 1e-59
 Identities = 118/166 (71%), Positives = 138/166 (83%), Gaps = 4/166 (2%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYE----KVKDDILLFFKLYDPEKEELRYV 320
            LKE  NKAHNAELKLFLEV   Q + G  S+      K K+D+LLFFKLYDP KEELRYV
Sbjct: 659  LKEASNKAHNAELKLFLEV---QRTPGAESVPMPPPIKTKEDVLLFFKLYDPLKEELRYV 715

Query: 319  GRTFVKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLED 140
            GR++VKASG+P DIL++LNEMAGF P+EEIQL+EEIKFEPNVMC  +EK++TF+ASQLED
Sbjct: 716  GRSYVKASGRPADILERLNEMAGFPPNEEIQLYEEIKFEPNVMCEHIEKKSTFKASQLED 775

Query: 139  GDIICFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            GDIIC+Q+ALTRE     RYPDVPSFL+YV  RQ+VHFRRLDKPK+
Sbjct: 776  GDIICYQRALTREQELASRYPDVPSFLEYVRNRQIVHFRRLDKPKD 821


>tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein OS=Lotus japonicus
            GN=CM0545.290.nc PE=4 SV=1
          Length = 1118

 Score =  230 bits (587), Expect = 2e-59
 Identities = 114/162 (70%), Positives = 133/162 (82%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
            ++EV NK HNAELKLFLEV    D R +    +K KDDILLFFKLYDPEKEELRYVGR F
Sbjct: 655  VREVSNKVHNAELKLFLEVELGPDLRPIAPS-DKTKDDILLFFKLYDPEKEELRYVGRLF 713

Query: 307  VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
            VK++GKP +IL +LNEMAG++P EEI L+EEIKFEPNVMC P++K+ TFRASQLEDGDII
Sbjct: 714  VKSTGKPSEILTRLNEMAGYDPDEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDII 773

Query: 127  CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            CFQKA   ++    RYPDVPS+L+YV+ RQVVHFR LDKPKE
Sbjct: 774  CFQKAPAMDSEEHVRYPDVPSYLEYVHNRQVVHFRSLDKPKE 815


>tr|A9S238|A9S238_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_180457 PE=4 SV=1
          Length = 1115

 Score =  230 bits (586), Expect = 3e-59
 Identities = 117/164 (71%), Positives = 137/164 (83%), Gaps = 2/164 (1%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEV--LPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGR 314
            LKE  NKAHNAELKLFLEV  LP  DS  +     K K+D+LLFFKLY+PEKEELRYVGR
Sbjct: 651  LKEASNKAHNAELKLFLEVQRLPGADSVPIPPPI-KTKEDVLLFFKLYNPEKEELRYVGR 709

Query: 313  TFVKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGD 134
            ++VKASG+P DIL++LNEMAGF P+EEIQL+EEIKFEPNVMC  ++K++TFRASQLEDGD
Sbjct: 710  SYVKASGRPADILERLNEMAGFPPNEEIQLYEEIKFEPNVMCEHIDKKSTFRASQLEDGD 769

Query: 133  IICFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            IIC+Q+ALTR      RYPDVPSFL+YV  RQ VHFRRL+KPK+
Sbjct: 770  IICYQRALTRGEEDVCRYPDVPSFLEYVRNRQNVHFRRLEKPKD 813


>tr|Q2QQM3|Q2QQM3_ORYSJ Ubiquitin-specific protease 12, putative,
            expressed OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g30540 PE=4 SV=2
          Length = 1125

 Score =  223 bits (569), Expect = 3e-57
 Identities = 114/162 (70%), Positives = 133/162 (82%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
            L+EV NKAHNAELKLFLEV    D R +    EK K+DILLFFKLY+PEKEEL +VGR F
Sbjct: 663  LREVSNKAHNAELKLFLEVETGVDLRPIRPP-EKSKEDILLFFKLYNPEKEELCFVGRLF 721

Query: 307  VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
            VKA+GKP +IL KLNEMAGF P+EEI+L+EEIKFEPNVMC  ++K+ TFR+SQLEDGDII
Sbjct: 722  VKATGKPSEILTKLNEMAGFAPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDII 781

Query: 127  CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            CFQK+   +   Q RYPDVPSFL+YV+ RQVVHFR L+KPKE
Sbjct: 782  CFQKSPVSDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKE 823


>tr|A3CHF8|A3CHF8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_034730 PE=4 SV=1
          Length = 606

 Score =  223 bits (569), Expect = 3e-57
 Identities = 114/162 (70%), Positives = 133/162 (82%)
 Frame = -1

Query: 487 LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
           L+EV NKAHNAELKLFLEV    D R +    EK K+DILLFFKLY+PEKEEL +VGR F
Sbjct: 176 LREVSNKAHNAELKLFLEVETGVDLRPIRPP-EKSKEDILLFFKLYNPEKEELCFVGRLF 234

Query: 307 VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
           VKA+GKP +IL KLNEMAGF P+EEI+L+EEIKFEPNVMC  ++K+ TFR+SQLEDGDII
Sbjct: 235 VKATGKPSEILTKLNEMAGFAPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDII 294

Query: 127 CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
           CFQK+   +   Q RYPDVPSFL+YV+ RQVVHFR L+KPKE
Sbjct: 295 CFQKSPVSDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKE 336


>tr|B8BPQ2|B8BPQ2_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_38365 PE=4 SV=1
          Length = 1076

 Score =  223 bits (568), Expect = 4e-57
 Identities = 114/162 (70%), Positives = 133/162 (82%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
            L+EV NKAHNAELKLFLEV    D R +    EK K+DILLFFKLY+PEKEEL +VGR F
Sbjct: 646  LREVSNKAHNAELKLFLEVETGVDLRPIRPP-EKSKEDILLFFKLYNPEKEELCFVGRLF 704

Query: 307  VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
            VKA+GKP +IL KLNEMAGF P+EEI+L+EEIKFEPNVMC  ++K+ TFR+SQLEDGDII
Sbjct: 705  VKATGKPSEILTKLNEMAGFAPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDII 764

Query: 127  CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            CFQK+   +   Q RYPDVPSFL+YV+ RQVVHFR L+KPKE
Sbjct: 765  CFQKSPVLDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKE 806


>tr|Q0IS23|Q0IS23_ORYSJ Os11g0573000 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os11g0573000 PE=4 SV=1
          Length = 658

 Score =  222 bits (565), Expect = 8e-57
 Identities = 115/162 (70%), Positives = 134/162 (82%)
 Frame = -1

Query: 487 LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
           L+EV NKAHNAELKLFLEV    D R L    EK K+DILLFFKLY+PEKEEL +VGR F
Sbjct: 196 LREVSNKAHNAELKLFLEVELGPDLRPLPPP-EKSKEDILLFFKLYNPEKEELCFVGRLF 254

Query: 307 VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
           VKA GKP +IL KLNEMAGF P+EEI+L+EEIKFEPNVMC  ++K+ATFRASQLEDGDII
Sbjct: 255 VKALGKPSEILTKLNEMAGFVPNEEIELYEEIKFEPNVMCEHIDKKATFRASQLEDGDII 314

Query: 127 CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
           CFQK+   ++  Q RYPDVPS+L+YV+ RQVVHFR L+KPK+
Sbjct: 315 CFQKSPIPDSDTQMRYPDVPSYLEYVHNRQVVHFRLLEKPKD 356


>tr|A7QNS3|A7QNS3_VITVI Chromosome undetermined scaffold_134, whole
            genome shotgun sequence OS=Vitis vinifera
            GN=GSVIVT00002647001 PE=4 SV=1
          Length = 1109

 Score =  221 bits (562), Expect = 2e-56
 Identities = 114/162 (70%), Positives = 133/162 (82%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
            L+EV NKA++AELKLFLEV   QD R +    EK K++ILLFFKLYDP KEELRYVGR F
Sbjct: 652  LREVSNKANHAELKLFLEVELGQDLRPVPPP-EKTKEEILLFFKLYDPLKEELRYVGRLF 710

Query: 307  VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
            VK SGKP +IL KLNE+AGF P+EEI+LFEEIKFEPNVMC  ++KR TFRASQLEDGDII
Sbjct: 711  VKGSGKPIEILSKLNELAGFSPNEEIELFEEIKFEPNVMCEHIDKRLTFRASQLEDGDII 770

Query: 127  CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            C+Q+ L  ++  Q RYPDVPSFL+YV+ RQVV FR L+KPKE
Sbjct: 771  CYQRLLQIDSSQQCRYPDVPSFLEYVHNRQVVRFRSLEKPKE 812


>tr|Q0D8F5|Q0D8F5_ORYSJ Os07g0163800 protein OS=Oryza sativa subsp.
            japonica GN=Os07g0163800 PE=4 SV=1
          Length = 1043

 Score =  220 bits (560), Expect = 3e-56
 Identities = 112/162 (69%), Positives = 127/162 (78%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
            LKE  NKAHNAELKLFLEV    D + L  L +K ++DILLFFKLYDPEKE+LRYVGR F
Sbjct: 583  LKEAANKAHNAELKLFLEVELGLDLKPL-PLPDKTREDILLFFKLYDPEKEQLRYVGRLF 641

Query: 307  VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
            VKASGKP DIL KL +MAGF   EEI+L+EEIKFEPNVMC  ++ R  FRA QLEDGDI+
Sbjct: 642  VKASGKPQDILPKLRKMAGFSQDEEIELYEEIKFEPNVMCEYIDNRLLFRACQLEDGDIV 701

Query: 127  CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            CFQK+   +   QYRYPDVPSFL Y+  RQVVHFR L+KPKE
Sbjct: 702  CFQKSPKPDTADQYRYPDVPSFLVYIRNRQVVHFRSLEKPKE 743


>tr|B8B7K1|B8B7K1_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_25004 PE=4 SV=1
          Length = 1089

 Score =  220 bits (560), Expect = 3e-56
 Identities = 112/162 (69%), Positives = 127/162 (78%)
 Frame = -1

Query: 487  LKEVVNKAHNAELKLFLEVLPDQDSRGLCSLYEKVKDDILLFFKLYDPEKEELRYVGRTF 308
            LKE  NKAHNAELKLFLEV    D + L  L +K ++DILLFFKLYDPEKE+LRYVGR F
Sbjct: 628  LKEAANKAHNAELKLFLEVELGLDLKPL-PLPDKTREDILLFFKLYDPEKEQLRYVGRLF 686

Query: 307  VKASGKPGDILDKLNEMAGFEPHEEIQLFEEIKFEPNVMCVPVEKRATFRASQLEDGDII 128
            VKASGKP DIL KL +MAGF   EEI+L+EEIKFEPNVMC  ++ R  FRA QLEDGDI+
Sbjct: 687  VKASGKPQDILPKLRKMAGFSQDEEIELYEEIKFEPNVMCEYIDNRLLFRACQLEDGDIV 746

Query: 127  CFQKALTRENLHQYRYPDVPSFLDYVNYRQVVHFRRLDKPKE 2
            CFQK+   +   QYRYPDVPSFL Y+  RQVVHFR L+KPKE
Sbjct: 747  CFQKSPKPDTADQYRYPDVPSFLVYIRNRQVVHFRSLEKPKE 788


  Database: uniprot_trembl.fasta
    Posted date:  Mar 25, 2009  6:21 PM
  Number of letters in database: 2,391,615,440
  Number of sequences in database:  7,341,751
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 7341751
Number of Hits to DB: 45,275,895,223,981
Number of extensions: -1343730519
Number of successful extensions: -1761809827
Number of sequences better than 10.0: 23338289
Number of HSP's gapped: -1782288151
Number of HSP's successfully gapped: 29997974
Length of database: 2,391,615,440
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)