DK943957
Clone id YMU02A01NGRL0004_I03
Library
Length 288
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_I03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
AAAAACCAAAGCGACCTCCGGCATCTCATGGCTATCAAAATGGGCACTCTAGTAGTCTTC
ATAATGGCCCTTATGGGGAAAACAATGAAGGGGGCTGGCAATAAATGTGTAAAGATTATG
CCCATTCTACAAGTATGTATCGCCATTTTTACCCAAAGGGTAAGGAGAAGGTGAAGAAGA
GAATGTTGTAACTCTTATTGGACATTGTGAGTGGCCTCAACAACATTTGTGGTTCAAGAG
AATGATGTTTTTCCTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943957|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_I03, 5'
(258 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A9UQT6
Definition tr|A9UQT6|A9UQT6_MONBE Predicted protein OS=Monosiga brevicollis
Align length 52
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943957|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_I03, 5'
(258 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9UQT6|A9UQT6_MONBE Predicted protein OS=Monosiga brevicollis... 33 9.3

>tr|A9UQT6|A9UQT6_MONBE Predicted protein OS=Monosiga brevicollis
GN=19374 PE=4 SV=1
Length = 389

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3

Query: 27 HGYQNGHSSSLHNGPYGENNEGGWQ*MCKDYAHSTSMYRHFYPKGKEKVKKR 182
HG+ +GH + G +G N+ G +AHS + H + G E K R
Sbjct: 194 HGHGHGHGHAHDEGRHGHNHGNGHAHSHDSHAHSHGSHAHGHGHGHESQKHR 245