DK943963
Clone id YMU02A01NGRL0004_I12
Library
Length 427
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_I12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GCCTGTTAGGTTATGCGGGAGGAGTGTTCATCGGCGACTTATGTCTTGTAACATGCGGGA
GGAGTGTTCATCGACGACTTTATGTTTCTATGTCTTGTAACATGCATATGTGAGCATGTG
TGTTGCATTGTGATGTGCCAACTACTGAATATTCCTAATTGGATGAGATTGCCTAGGTAT
GTAATTTTAGTTCATTCAATACACCCGTGGAAGATCGGTACGGTCTGAGTGTGATGGCTA
ATTTTACTACGCCGGAATATCAAGAGTTCCGATCTGGACGAAAGGAGAAGCTAACTCCTT
GATCAAAAGAGCCGAAAGGAGAGGCTAACTCCTTGATCAAAAGAGCCGAAAGGAGAAGCT
AACTCCTTAACAAAAAGAGCAAAGTGATTGTCCCTCGGAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9ULX7
Definition sp|Q9ULX7|CAH14_HUMAN Carbonic anhydrase 14 OS=Homo sapiens
Align length 43
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943963|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_I12, 5'
(398 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ULX7|CAH14_HUMAN Carbonic anhydrase 14 OS=Homo sapiens GN=C... 30 2.9
sp|Q7Z570|Z804A_HUMAN Zinc finger protein 804A OS=Homo sapiens G... 29 8.3

>sp|Q9ULX7|CAH14_HUMAN Carbonic anhydrase 14 OS=Homo sapiens GN=CA14
PE=2 SV=1
Length = 337

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -1

Query: 185 ITYLGNLIQLGIFSSWHITMQHTCSHMHVTRHRNIKSSMNTPP 57
+ LG LI++G + +I +H SH+H RH++ K+S+ PP
Sbjct: 157 LAVLGILIEVG--ETKNIAYEHILSHLHEVRHKDQKTSV--PP 195


>sp|Q7Z570|Z804A_HUMAN Zinc finger protein 804A OS=Homo sapiens
GN=ZNF804A PE=1 SV=3
Length = 1209

Score = 28.9 bits (63), Expect = 8.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3

Query: 132 HNATHMLTYACYKT*KHKVVDEHSSRMLQD 43
HN T+ TY C+KT +H S +LQ+
Sbjct: 714 HNLTYSRTYCCWKTKMSSCSQDHRSLVLQN 743


tr_hit_id A1JU57
Definition tr|A1JU57|A1JU57_YERE8 Putative fatty acid desaturase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)
Align length 42
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943963|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_I12, 5'
(398 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1JU57|A1JU57_YERE8 Putative fatty acid desaturase OS=Yersini... 35 1.9
tr|B5AH44|B5AH44_9ROSI Cytochrome c heme attachment protein OS=G... 34 4.1
tr|B0BEP7|B0BEP7_9ROSI Cytochrome c biogenesis protein (Fragment... 33 9.2
tr|B0BEP6|B0BEP6_9ROSI Cytochrome c biogenesis protein (Fragment... 33 9.2

>tr|A1JU57|A1JU57_YERE8 Putative fatty acid desaturase OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=YE2866 PE=4 SV=1
Length = 352

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = -1

Query: 182 TYLGNLIQLGIFSSWHITMQHTCSHMHVTRHRNIKSSMNTPP 57
T LG+++ + +F++W++++QH H H TR R + + T P
Sbjct: 65 TVLGSILLI-LFTAWYMSLQHELIHGHPTRWRGVNQLLGTLP 105


>tr|B5AH44|B5AH44_9ROSI Cytochrome c heme attachment protein
OS=Gonystylus bancanus GN=ccsA PE=4 SV=1
Length = 326

Score = 33.9 bits (76), Expect = 4.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1

Query: 176 LGNLIQLGIFSSWHITMQHTCSHMHVTRHRNIKSSMNTPPACY 48
L NL + IF SW ++ H S+ H T+ +N S++ T A +
Sbjct: 71 LSNLYESLIFLSWSFSIIHMVSYFHFTKQKNALSAITTSSAIF 113


>tr|B0BEP7|B0BEP7_9ROSI Cytochrome c biogenesis protein (Fragment)
OS=Stephanodaphne oblongifolia GN=ycf5 PE=4 SV=1
Length = 128

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1

Query: 176 LGNLIQLGIFSSWHITMQHTCSHMHVTRHRNIKSSMNTPPACY 48
L NL + IF SW ++ H S+ H +H+N S++ A +
Sbjct: 53 LSNLYESLIFLSWSFSIIHMVSYFHFKKHKNALSAITASSAIF 95


>tr|B0BEP6|B0BEP6_9ROSI Cytochrome c biogenesis protein (Fragment)
OS=Stephanodaphne cremostachya GN=ycf5 PE=4 SV=1
Length = 128

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1

Query: 176 LGNLIQLGIFSSWHITMQHTCSHMHVTRHRNIKSSMNTPPACY 48
L NL + IF SW ++ H S+ H +H+N S++ A +
Sbjct: 53 LSNLYESLIFLSWSFSIIHMVSYFHFKKHKNALSAITASSAIF 95