DK943992
Clone id YMU02A01NGRL0004_K03
Library
Length 589
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0004_K03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GTTTGCTTCAGTAATGCACATCTGTATTGCTCATGTCAACCTTCATCTCAGTGATAGTGT
TGGTGTATTTTGGTTTTCATCTTACACGCCTGCATGTATGGTGGATGAACAACTCGCAGG
CATGTTGCAGTAGTTGTCGAGATTGCCTGCATGCTTCCTTCCTCCTGGCCAAGTGGGCAA
AAAATAAACCGCCAACTTCTTCAGCTAATCTTTGGCTAACTGTGTGGTCCTTATCTTTCC
TTTCTCTAAATCTCCAAGTCGATCGAGGGGTCGCGAAGAAGGCAAAATAGCCCTGTGAGC
CACGACGTGATCTTGGGGTATTGGACCATGGATAAGCCATCATGCGCGGCGCTTTTGCTG
CACATTATGACCAAGCATATGCCATGATATGCAACGCTTTTGCTCTCTCTTTTGTTGTCT
CTTCAATGTGCATCGGTGGTGCAGTAGGGATGAACAATAAATATATCACTCCCAGTCCTC
GGTCCCAATCCAGATGGAGGTGTTGGTGGTGATGATACTACCCGATGAATGTTAATCATT
ATCCGTACTTATTATATTTAGGGAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5RCZ7
Definition sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii
Align length 119
Score (bit) 30.8
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943992|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_K03, 5'
(563 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 O... 31 4.8
sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 O... 31 4.8
sp|Q7TPV4|MBB1A_MOUSE Myb-binding protein 1A OS=Mus musculus GN=... 31 4.8
sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=... 30 6.3
sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 O... 30 6.3
sp|Q8C0T9|ADCYA_MOUSE Adenylate cyclase type 10 OS=Mus musculus ... 30 8.2

>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2
OS=Pongo abelii GN=RCBTB2 PE=2 SV=1
Length = 551

Score = 30.8 bits (68), Expect = 4.8
Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 17/119 (14%)
Frame = -2

Query: 430 HIEETTKERAKALHIMAYAWS*CAAKA---PRMMAYPWSNTPRSRRGSQGYFAFFATPRS 260
H T+ + + H+ Y W C ++ P + + ++ FA FATP
Sbjct: 317 HSTHTSAAKTQGGHV--YMWGQCRGQSVILPHLTHFSCTDD---------VFACFATPAV 365

Query: 259 TWRFRERKDKDH-TVSQRLAEEV-------------GGLFFAHLARRKEACRQSRQLLQ 125
TWR + DH TV++ L E G +AH K C R L+
Sbjct: 366 TWRLLSVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLE 424


>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2
OS=Homo sapiens GN=RCBTB2 PE=2 SV=1
Length = 551

Score = 30.8 bits (68), Expect = 4.8
Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 17/119 (14%)
Frame = -2

Query: 430 HIEETTKERAKALHIMAYAWS*CAAKA---PRMMAYPWSNTPRSRRGSQGYFAFFATPRS 260
H T+ + + H+ Y W C ++ P + + ++ FA FATP
Sbjct: 317 HSTHTSAAKTQGGHV--YMWGQCRGQSVILPHLTHFSCTDD---------VFACFATPAV 365

Query: 259 TWRFRERKDKDH-TVSQRLAEEV-------------GGLFFAHLARRKEACRQSRQLLQ 125
TWR + DH TV++ L E G +AH K C R L+
Sbjct: 366 TWRLLSVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLE 424


>sp|Q7TPV4|MBB1A_MOUSE Myb-binding protein 1A OS=Mus musculus
GN=Mybbp1a PE=1 SV=2
Length = 1344

Score = 30.8 bits (68), Expect = 4.8
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2

Query: 238 KDKDHTVSQRLAEEVGGLFFAHLARRKEACRQSRQLLQHACELFIHHTCRRVR 80
K +H + L E + + H R K + +Q + LL +F+HH CR R
Sbjct: 837 KQPEHPLILELLEPLLNVI-QHSMRSKGSTKQEQDLLHKTARIFMHHLCRARR 888


>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2
OS=Rattus norvegicus GN=Rcbtb2 PE=2 SV=1
Length = 551

Score = 30.4 bits (67), Expect = 6.3
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 14/68 (20%)
Frame = -2

Query: 286 FAFFATPRSTWRFRERKDKDH-TVSQRLAEEV-------------GGLFFAHLARRKEAC 149
FA FATP TWR + DH TV++ L E G +AH K C
Sbjct: 357 FACFATPAVTWRLLSVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRC 416

Query: 148 RQSRQLLQ 125
R L+
Sbjct: 417 EHFRSSLE 424


>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2
OS=Mus musculus GN=Rcbtb2 PE=2 SV=1
Length = 551

Score = 30.4 bits (67), Expect = 6.3
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 14/68 (20%)
Frame = -2

Query: 286 FAFFATPRSTWRFRERKDKDH-TVSQRLAEEV-------------GGLFFAHLARRKEAC 149
FA FATP TWR + DH TV++ L E G +AH K C
Sbjct: 357 FACFATPAVTWRLLSVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRC 416

Query: 148 RQSRQLLQ 125
R L+
Sbjct: 417 EHFRSSLE 424


>sp|Q8C0T9|ADCYA_MOUSE Adenylate cyclase type 10 OS=Mus musculus
GN=Adcy10 PE=2 SV=1
Length = 1614

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Frame = -3

Query: 459 YCSSLL----HHRCTLKRQQKREQKRCISW-HMLGHNVQ 358
YC LL HHR L +Q + EQK ++W +M H+V+
Sbjct: 737 YCEELLKNLDHHRVLLFQQAETEQKTNVTWNNMFKHSVR 775


tr_hit_id Q6ZNM4
Definition tr|Q6ZNM4|Q6ZNM4_HUMAN cDNA FLJ29005 fis, clone TST07872 OS=Homo sapiens
Align length 38
Score (bit) 33.5
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943992|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0004_K03, 5'
(563 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6ZNM4|Q6ZNM4_HUMAN cDNA FLJ29005 fis, clone TST07872 OS=Homo... 33 8.2
tr|Q68DL1|Q68DL1_HUMAN Putative uncharacterized protein DKFZp686... 33 8.2
tr|Q5IR90|Q5IR90_HUMAN ADAMTS6 variant 2 (Fragment) OS=Homo sapi... 33 8.2
tr|Q5IR89|Q5IR89_HUMAN ADAMTS6 variant 2 OS=Homo sapiens GN=ADAM... 33 8.2
tr|Q59EX6|Q59EX6_HUMAN A disintegrin and metalloprotease with th... 33 8.2
tr|A6NC50|A6NC50_HUMAN Putative uncharacterized protein ADAMTS6 ... 33 8.2

>tr|Q6ZNM4|Q6ZNM4_HUMAN cDNA FLJ29005 fis, clone TST07872 OS=Homo
sapiens PE=2 SV=1
Length = 288

Score = 33.5 bits (75), Expect = 8.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1

Query: 179 CPLGQEEGSMQAISTT---TATCLRVVHPPYMQACKMK 75
C LGQ+ ++Q +S T ++ CL V PP MQ C+ K
Sbjct: 205 CGLGQQMRTVQCLSYTGQASSDCLETVRPPSMQQCESK 242


>tr|Q68DL1|Q68DL1_HUMAN Putative uncharacterized protein
DKFZp686G05175 OS=Homo sapiens GN=DKFZp686G05175 PE=2
SV=1
Length = 306

Score = 33.5 bits (75), Expect = 8.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1

Query: 179 CPLGQEEGSMQAISTT---TATCLRVVHPPYMQACKMK 75
C LGQ+ ++Q +S T ++ CL V PP MQ C+ K
Sbjct: 223 CGLGQQMRTVQCLSYTGQASSDCLETVRPPSMQQCESK 260


>tr|Q5IR90|Q5IR90_HUMAN ADAMTS6 variant 2 (Fragment) OS=Homo sapiens
GN=ADAMTS6 PE=2 SV=1
Length = 270

Score = 33.5 bits (75), Expect = 8.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1

Query: 179 CPLGQEEGSMQAISTT---TATCLRVVHPPYMQACKMK 75
C LGQ+ ++Q +S T ++ CL V PP MQ C+ K
Sbjct: 187 CGLGQQMRTVQCLSYTGQASSDCLETVRPPSMQQCESK 224


>tr|Q5IR89|Q5IR89_HUMAN ADAMTS6 variant 2 OS=Homo sapiens GN=ADAMTS6
PE=2 SV=1
Length = 1117

Score = 33.5 bits (75), Expect = 8.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1

Query: 179 CPLGQEEGSMQAISTT---TATCLRVVHPPYMQACKMK 75
C LGQ+ ++Q +S T ++ CL V PP MQ C+ K
Sbjct: 1034 CGLGQQMRTVQCLSYTGQASSDCLETVRPPSMQQCESK 1071


>tr|Q59EX6|Q59EX6_HUMAN A disintegrin and metalloprotease with
thrombospondin motifs-6 variant (Fragment) OS=Homo
sapiens PE=2 SV=1
Length = 530

Score = 33.5 bits (75), Expect = 8.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1

Query: 179 CPLGQEEGSMQAISTT---TATCLRVVHPPYMQACKMK 75
C LGQ+ ++Q +S T ++ CL V PP MQ C+ K
Sbjct: 447 CGLGQQMRTVQCLSYTGQASSDCLETVRPPSMQQCESK 484


>tr|A6NC50|A6NC50_HUMAN Putative uncharacterized protein ADAMTS6
OS=Homo sapiens GN=ADAMTS6 PE=4 SV=1
Length = 310

Score = 33.5 bits (75), Expect = 8.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1

Query: 179 CPLGQEEGSMQAISTT---TATCLRVVHPPYMQACKMK 75
C LGQ+ ++Q +S T ++ CL V PP MQ C+ K
Sbjct: 227 CGLGQQMRTVQCLSYTGQASSDCLETVRPPSMQQCESK 264