DK944415
Clone id YMU02A01NGRL0005_P22
Library
Length 501
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0005_P22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
AGAATGCACACACAGGTCATCCATATAAATCACTAAGAATTGTCTTAGATACTCCTTGAA
TGCATGACTCATTATCCTTTGGCATGTGGTAGGTACATTGGTTAGACCTAATGGCATCAC
TCATATTTTGTGTTGATCCTCGAGCTTAATTGTGAGCTAGTTATAGCCCAAAAAGTCATC
GAGAAATTTGTAGTCTTCTTTTCCAGCAGCTCTTTCAATCACATGGTTTGTGATGGGCAA
GGTGTAGTTGTCTCTGATCGTAGTAGAATTCACCTATTTGATATTTACGCACACTCGTAA
TCTATCATTCTATTTGGGCACCACTACAATTGGTGACACCCACTCCGTGTGTTCTATCAT
ATAGATAAACTCTATCTGTTTAAGTTTGTCTATCTCTTCTTTGATTTTTCTTGCAAATAT
TTTATTAAAGGTATAGGGATGATGTTGGCATGGTGTAACATCGTTCTTGAGGGGTATCAT
GTGTTGGCATATGCTCAGTTC
■■Homology search results ■■ -
sp_hit_id Q7LHG5
Definition sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae
Align length 173
Score (bit) 73.2
E-value 7.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944415|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_P22, 5'
(501 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 73 7e-13
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 73 7e-13
sp|P31843|RRPO_OENBE RNA-directed DNA polymerase homolog OS=Oeno... 57 4e-08
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra... 57 5e-08
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 54 3e-07
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 54 4e-07
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 51 3e-06
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 51 3e-06
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra... 50 5e-06
sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic ... 50 8e-06
sp|P03555|POL_CAMVC Enzymatic polyprotein OS=Cauliflower mosaic ... 50 8e-06
sp|P03554|POL_CAMVS Enzymatic polyprotein OS=Cauliflower mosaic ... 49 1e-05
sp|Q00962|POL_CAMVN Enzymatic polyprotein OS=Cauliflower mosaic ... 48 2e-05
sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mot... 47 5e-05
sp|P03556|POL_CAMVD Enzymatic polyprotein OS=Cauliflower mosaic ... 47 7e-05
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra... 42 0.002
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra... 40 0.005
sp|P05400|POL_CERV Enzymatic polyprotein OS=Carnation etched rin... 39 0.010
sp|P27502|POL_RTBVP Polyprotein P3 OS=Rice tungro bacilliform vi... 39 0.018
sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorha... 38 0.023
sp|P51517|POL_SRV2 Pol polyprotein OS=Simian retrovirus SRV-2 GN... 35 0.26
sp|P31623|POL_JSRV Pol polyprotein OS=Sheep pulmonary adenomatos... 35 0.26
sp|P12894|POL_IPMAI Probable Pol polyprotein OS=Mouse intraciste... 34 0.44
sp|P11368|POL_IPMA Putative Pol polyprotein OS=Mouse intracister... 33 0.75
sp|P04026|POL_IPHA Putative Pol polyprotein OS=Hamster intracist... 33 0.75
sp|P03365|POL_MMTVB Pol polyprotein OS=Mouse mammary tumor virus... 33 0.98
sp|P07572|POL_MPMV Pol polyprotein OS=Mason-Pfizer monkey virus ... 32 1.3
sp|Q9UKP4|ATS7_HUMAN A disintegrin and metalloproteinase with th... 31 2.9
sp|A4SG02|PSD_PROVI Phosphatidylserine decarboxylase proenzyme O... 31 3.7
sp|P03364|POL_SMRVH Pol polyprotein OS=Squirrel monkey retroviru... 31 3.7

>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
Length = 1498

Score = 73.2 bits (178), Expect = 7e-13
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Frame = -1

Query: 486 QHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVPK*N 307
+H I +K + PY + ++I + + KL +FI + + SP+V+VPK +
Sbjct: 611 KHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFI-VPSKSPCSSPVVLVPKKD 669

Query: 306 DRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLEDQHK 127
R+CV+ + +N TI D + LP ++++ R + + LD GY+ + ++ +D++K
Sbjct: 670 GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYK 729

Query: 126 -----------I*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
VMP GL N P+T R M+ F++ +F+ +Y+DD+ + S
Sbjct: 730 TAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFS 780


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
Length = 1547

Score = 73.2 bits (178), Expect = 7e-13
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Frame = -1

Query: 486 QHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVPK*N 307
+H I +K + PY + ++I + + KL +FI + + SP+V+VPK +
Sbjct: 585 KHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFI-VPSKSPCSSPVVLVPKKD 643

Query: 306 DRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLEDQHK 127
R+CV+ + +N TI D + LP ++++ R + + LD GY+ + ++ +D++K
Sbjct: 644 GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYK 703

Query: 126 -----------I*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
VMP GL N P+T R M+ F++ +F+ +Y+DD+ + S
Sbjct: 704 TAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFS 754


>sp|P31843|RRPO_OENBE RNA-directed DNA polymerase homolog
OS=Oenothera bertiana PE=4 SV=1
Length = 142

Score = 57.4 bits (137), Expect = 4e-08
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Frame = -1

Query: 300 LRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLEDQHK-- 127
LR+C++ + + TI++ Y +P + + +R A + LD GY + I D+ K
Sbjct: 6 LRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTT 65

Query: 126 ---------I*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
VMP GLTN T +M++ EYL F+V+Y+DDL V++
Sbjct: 66 CVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYT 116


>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
transposon opus OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1003

Score = 57.0 bits (136), Expect = 5e-08
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Frame = -1

Query: 441 HPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVPK*-----NDRLRVCVNIK 277
+PY N +++ +ID+L Q + I ++ + SPI +VPK + R+ V+ K
Sbjct: 129 YPYPVN--MRGEVERQIDELLQ-DGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFK 185

Query: 276 *VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLED-----------QH 130
+N+ TI D Y +P N + + + LD G++ + +K D ++
Sbjct: 186 RLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKY 245

Query: 129 KI*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
+ +P GL N P QR++ +E++ + +Y+DD+ V S
Sbjct: 246 EFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFS 288


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1058

Score = 54.3 bits (129), Expect = 3e-07
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Frame = -1

Query: 486 QHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVPK*N 307
+H +PL + Y++ + + ++++ +I + + I ++ + SPI VVPK
Sbjct: 204 KHNLPL--------YSKYSYPQAYEQEVESQIQDMLN-QGIIRTSNSPYNSPIWVVPKKQ 254

Query: 306 D-----RLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKL 142
D + R+ ++ + +N T+ D + +P + ++ + + +D G++ + +
Sbjct: 255 DASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDP 314

Query: 141 EDQHKI*V-----------MPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
E K MP GL N P T QR M+ + L + ++Y+DD+ V S
Sbjct: 315 ESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFS 372


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
Length = 1333

Score = 53.9 bits (128), Expect = 4e-07
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Frame = -1

Query: 333 PIVVVPK*NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*L 154
P++ VPK LR+ V+ K +N + Y LP+ ++ + G + LD Y+ +
Sbjct: 451 PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLI 510

Query: 153 TIKLEDQHKI-----------*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCV 7
++ D+HK+ VMP G++ P Q ++ E +V YMDD+ +
Sbjct: 511 RVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILI 570

Query: 6 HS 1
HS
Sbjct: 571 HS 572


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
Length = 1333

Score = 51.2 bits (121), Expect = 3e-06
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Frame = -1

Query: 333 PIVVVPK*NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*L 154
P++ VPK LR+ V+ K +N + Y LP+ ++ + G + LD Y+ +
Sbjct: 451 PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLI 510

Query: 153 TIKLEDQHKI-----------*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCV 7
++ D+HK+ VMP G++ P Q ++ E +V YMD++ +
Sbjct: 511 RVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILI 570

Query: 6 HS 1
HS
Sbjct: 571 HS 572


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
Length = 1333

Score = 51.2 bits (121), Expect = 3e-06
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Frame = -1

Query: 333 PIVVVPK*NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*L 154
P++ VPK LR+ V+ K +N + Y LP+ ++ + G + LD Y+ +
Sbjct: 451 PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLI 510

Query: 153 TIKLEDQHKI-----------*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCV 7
++ D+HK+ VMP G++ P Q ++ E +V YMD++ +
Sbjct: 511 RVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILI 570

Query: 6 HS 1
HS
Sbjct: 571 HS 572


>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
transposon 297 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1059

Score = 50.4 bits (119), Expect = 5e-06
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
Frame = -1

Query: 336 SPIVVVPK*ND-----RLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDF 172
SP VVPK D + RV ++ + +N TI D Y +P + ++ + + + +D
Sbjct: 244 SPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLA 303

Query: 171 LGYN*LTIKLEDQHKI*V-----------MPLGLTNVPTTCQRIMSHAFKEYLRQFLVIY 25
G++ + + E K MP GL N P T QR M++ + L + ++Y
Sbjct: 304 KGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVY 363

Query: 24 MDDLCVHS 1
+DD+ + S
Sbjct: 364 LDDIIIFS 371


>sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic
virus (strain BBC) GN=ORF V PE=3 SV=1
Length = 679

Score = 49.7 bits (117), Expect = 8e-06
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 18/152 (11%)
Frame = -1

Query: 402 KEEIDK-LKQIEFIYMIEHTE--WVSPIVVV----PK*NDRLRVCVNIK*VNSTTIRDNY 244
+EE DK +K++ + +I+ ++ ++P +V K + R+ VN K +N TI D Y
Sbjct: 259 REEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAY 318

Query: 243 TLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLEDQ-----------HKI*VMPLGLTN 97
LP + ++ GK+ + D G+ + + E + ++ V+P GL
Sbjct: 319 NLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQ 378

Query: 96 VPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
P+ QR M AF+ + R+F +Y+DD+ V S
Sbjct: 379 APSIFQRHMDEAFRVF-RKFCCVYVDDILVFS 409


tr_hit_id Q0ZCC8
Definition tr|Q0ZCC8|Q0ZCC8_POPTR Integrase OS=Populus trichocarpa
Align length 191
Score (bit) 105.0
E-value 1.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944415|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0005_P22, 5'
(501 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0ZCC8|Q0ZCC8_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 105 1e-21
tr|Q2AA48|Q2AA48_ASPOF Reverse transcriptase family protein OS=A... 104 2e-21
tr|Q53NA3|Q53NA3_ORYSJ Retrotransposon protein, putative, unclas... 103 5e-21
tr|Q2R0G5|Q2R0G5_ORYSJ Retrotransposon protein, putative, unclas... 103 5e-21
tr|Q2AA00|Q2AA00_ASPOF Reverse transcriptase family protein OS=A... 103 5e-21
tr|Q7XXJ2|Q7XXJ2_ORYSJ OSJNBa0094O15.10 protein OS=Oryza sativa ... 102 8e-21
tr|Q6ATH7|Q6ATH7_ORYSJ Putative polyprotein OS=Oryza sativa subs... 102 8e-21
tr|Q2QXA7|Q2QXA7_ORYSJ Retrotransposon protein, putative, unclas... 102 8e-21
tr|A7QJX4|A7QJX4_VITVI Chromosome undetermined scaffold_108, who... 102 8e-21
tr|A5BSV0|A5BSV0_VITVI Putative uncharacterized protein OS=Vitis... 102 8e-21
tr|A5CAG9|A5CAG9_VITVI Putative uncharacterized protein OS=Vitis... 102 1e-20
tr|A5BJD2|A5BJD2_VITVI Putative uncharacterized protein OS=Vitis... 102 1e-20
tr|Q6UUB8|Q6UUB8_ORYSJ Putative reverse transcriptase OS=Oryza s... 102 1e-20
tr|A5B8Z6|A5B8Z6_VITVI Putative uncharacterized protein OS=Vitis... 101 2e-20
tr|A5AW20|A5AW20_VITVI Putative uncharacterized protein OS=Vitis... 101 2e-20
tr|A2Q2J0|A2Q2J0_MEDTR RNA-directed DNA polymerase (Reverse tran... 101 2e-20
tr|Q2AA50|Q2AA50_ASPOF Retrotransposon gag protein OS=Asparagus ... 100 3e-20
tr|A5BZJ9|A5BZJ9_VITVI Putative uncharacterized protein OS=Vitis... 100 3e-20
tr|A5BVK0|A5BVK0_VITVI Putative uncharacterized protein OS=Vitis... 100 3e-20
tr|A5BSJ3|A5BSJ3_VITVI Putative uncharacterized protein OS=Vitis... 100 3e-20
tr|Q75L75|Q75L75_ORYSJ Putative reverse transcriptase (Retrotran... 100 4e-20
tr|Q2QTQ7|Q2QTQ7_ORYSJ Retrotransposon protein, putative, unclas... 100 4e-20
tr|Q2QTB8|Q2QTB8_ORYSJ Retrotransposon protein, putative, unclas... 100 4e-20
tr|A5AKW2|A5AKW2_VITVI Putative uncharacterized protein OS=Vitis... 100 4e-20
tr|Q7XSP1|Q7XSP1_ORYSJ OSJNBa0070M12.15 protein OS=Oryza sativa ... 100 5e-20
tr|Q2QW64|Q2QW64_ORYSJ Retrotransposon protein, putative, unclas... 100 5e-20
tr|Q2QSI5|Q2QSI5_ORYSJ Retrotransposon protein, putative, unclas... 100 5e-20
tr|A5C1W7|A5C1W7_VITVI Putative uncharacterized protein OS=Vitis... 100 5e-20
tr|A5BKG7|A5BKG7_VITVI Putative uncharacterized protein OS=Vitis... 100 5e-20
tr|A5C050|A5C050_VITVI Putative uncharacterized protein OS=Vitis... 100 7e-20

>tr|Q0ZCC8|Q0ZCC8_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1
Length = 879

Score = 105 bits (262), Expect = 1e-21
Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 29/191 (15%)
Frame = -1

Query: 492 ICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVPK 313
IC H I L+ + P + N ++ E+ KL IY I ++WVSP VV K
Sbjct: 245 ICTHRIYLEENAKPFREMQRRLNPNMKEVVRNEVIKLLDNRIIYPISDSKWVSPTQVVSK 304

Query: 312 *-------NDRL-----------RVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYK 187
N+++ R+C++ + +NS T +DN+ LP + ++ER AG E Y
Sbjct: 305 KSGVTVITNEKIELIPTRTITGWRMCIDYRKLNSMTRKDNFHLPFMDQILERVAGHEFYC 364

Query: 186 FLDDFLGYN*LTIKLEDQHKI*V-----------MPLGLTNVPTTCQRIMSHAFKEYLRQ 40
FLD + GYN + I LEDQ K MP GL N P T QR M F + + +
Sbjct: 365 FLDGYSGYNQIEIALEDQEKTTFTYPFETFAYRRMPFGLCNAPATFQRCMLSIFSDMVER 424

Query: 39 FLVIYMDDLCV 7
FL I+MDD V
Sbjct: 425 FLEIFMDDFSV 435


>tr|Q2AA48|Q2AA48_ASPOF Reverse transcriptase family protein
OS=Asparagus officinalis GN=19.t00011 PE=4 SV=1
Length = 1181

Score = 104 bits (260), Expect = 2e-21
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Frame = -1

Query: 492 ICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVPK 313
+ H + + DV P + F I+ E+ KL F+ +H +WV+ IV VPK
Sbjct: 669 VAMHRLNIDPDVKPVKQQQRRFRPEIMESIESEVKKLIDSGFVREEQHPDWVANIVPVPK 728

Query: 312 *NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLEDQ 133
N ++R+C++ + +N+T +D + LPIT+ +I+ G E F+D F GYN + + +D+
Sbjct: 729 KNGKVRICIDFRDLNATCPKDEFPLPITDVMIDNTCGYERMSFMDGFSGYNQIKMHPDDE 788

Query: 132 -----------HKI*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
+ VMP GL N T QR M+ F E+LR+ + Y+DD+ V S
Sbjct: 789 KHTAFRTPLGVYCYTVMPFGLKNAGATYQRAMNTIFHEHLRKKIECYVDDVAVKS 843


>tr|Q53NA3|Q53NA3_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os11g14090 PE=4 SV=1
Length = 2122

Score = 103 bits (257), Expect = 5e-21
Identities = 63/178 (35%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Frame = -1

Query: 492 ICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVPK 313
+ +H +P+K P + P FN + ++KEEID+L + FI + EWVS IV V K
Sbjct: 1140 LVEHRLPIKPGFRPYKQPPCRFNPLLYDRVKEEIDRLLKAGFIRPCRYAEWVSSIVPVEK 1199

Query: 312 *ND-RLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLED 136
++RVC+N + +N T +D Y +PI + +I A+G + FLD GYN + + ED
Sbjct: 1200 KGSGKIRVCINFRDLNKATPKDEYPMPIADMMINDASGHKLISFLDGNAGYNQIFMAEED 1259

Query: 135 QHKI-------------*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
+K VM GL N T QR M+ F + L L IY+DD+ V S
Sbjct: 1260 MYKTAFRCPGFVGLFEWVVMTFGLKNAGATYQRAMNLIFHDLLGIILEIYIDDIVVKS 1317


>tr|Q2R0G5|Q2R0G5_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os11g42630 PE=4 SV=1
Length = 2096

Score = 103 bits (257), Expect = 5e-21
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 13/178 (7%)
Frame = -1

Query: 495 SICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVP 316
SI +H +P+K P + P+ F IK EI +L FI + EWV IV V
Sbjct: 1105 SIVEHRLPIKQGYRPFKQAPWRFKADMHEAIKAEITRLYDANFIRPCRYAEWVPNIVPVL 1164

Query: 315 K*NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLED 136
K N +LRVCV+ + +N T +D Y +P+ + +++ A+G + F+D GYN + + ED
Sbjct: 1165 KKNGKLRVCVDFRDLNKATPKDEYPMPLVDLLVDAASGHKIISFMDGNAGYNQIFMAKED 1224

Query: 135 QHKI-------------*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
HK VM GL N T QR M++ F + + + +Y+DD+ V S
Sbjct: 1225 IHKTAFRCPGAIGLYEWVVMTFGLKNAGATYQRAMNYIFHDLIGSLIEVYIDDVVVKS 1282


>tr|Q2AA00|Q2AA00_ASPOF Reverse transcriptase family protein
OS=Asparagus officinalis GN=20.t00044 PE=4 SV=1
Length = 1146

Score = 103 bits (257), Expect = 5e-21
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 11/176 (6%)
Frame = -1

Query: 495 SICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVP 316
++ H + +K+D P + F I+ E+ KL + FI +H +W++ I+ V
Sbjct: 499 NVAMHRLDIKSDAKPVKQQQRRFRPQIMEAIEAEVKKLIESGFIREEQHPDWLANIIPVM 558

Query: 315 K*NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLED 136
K N ++R+C++ + +N+ +D++ LPIT+ +I+ G E F+D F GYN + + +D
Sbjct: 559 KKNGKIRICIDFRDLNTACPKDDFPLPITDVIIDNTCGFERMSFMDGFSGYNQIKMHPDD 618

Query: 135 QHK-----------I*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
+ VMP GL N T QR M+ F+E+LR+ + Y+DDL V S
Sbjct: 619 EKHTAFRIPLGVFCYTVMPFGLKNAGATYQRAMTKIFQEHLRKTVECYVDDLVVKS 674


>tr|Q7XXJ2|Q7XXJ2_ORYSJ OSJNBa0094O15.10 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0094O15.10 PE=4 SV=2
Length = 1197

Score = 102 bits (255), Expect = 8e-21
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Frame = -1

Query: 495 SICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVP 316
SI +H +P+K V P Q P +K EI +L FI+ + EWVS IV V
Sbjct: 385 SIVEHRLPIKPRVRPHQQLPRRCKADMLEPVKAEIKRLYDAGFIHPCRYAEWVSSIVPVI 444

Query: 315 K*NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLED 136
K N ++RVC++ + +N T +D Y +P+ +H+++ A+G + F+D GYN + + ED
Sbjct: 445 KKNGKVRVCIDFQDLNKATPKDEYPMPVADHLVDAASGNKILSFMDGNAGYNQIFMAEED 504

Query: 135 QHKI-------------*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
HK VM GL + T QR M++ + + + + +Y+DD+ V S
Sbjct: 505 IHKTAFRCPGAIGLFEWVVMTFGLKSAGATYQRAMNYIYHDLIGSLVEVYIDDVVVKS 562


>tr|Q6ATH7|Q6ATH7_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=OSJNBa0093E24.4 PE=4 SV=1
Length = 1941

Score = 102 bits (255), Expect = 8e-21
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Frame = -1

Query: 492 ICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIV-VVP 316
+ +H P+K+ P + P+ FN + ++KEEID+L + FI + EWVS IV V
Sbjct: 1119 LVEHRFPIKSGFRPYKQPPHRFNPLLYDRVKEEIDRLLKAGFIRPCRYAEWVSSIVPVEK 1178

Query: 315 K*NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLED 136
K + ++RVC++ + +N T +D Y +PI + +I A+G + FLD GYN + + ED
Sbjct: 1179 KESGKIRVCIDFRDLNKATPKDEYPMPIADMMINDASGHKVISFLDGNAGYNQIFMAEED 1238

Query: 135 QHKI-------------*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
+K VM GL N T QR ++ F + L L IY+DD+ V S
Sbjct: 1239 MYKTAFRCPGFVGLFEWVVMTFGLKNAGATYQRAINLIFHDLLGVILEIYIDDIVVKS 1296


>tr|Q2QXA7|Q2QXA7_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os12g06680 PE=4 SV=2
Length = 1179

Score = 102 bits (255), Expect = 8e-21
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Frame = -1

Query: 495 SICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVP 316
SI +H +P+K+ V P Q P +K E+ +L + FI + EWVS IV V
Sbjct: 661 SIVEHRLPIKHGVRPYQQPPRRCKADMLEAVKAEVTRLYDVGFIRPCRYAEWVSNIVPVI 720

Query: 315 K*NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLED 136
K N ++RVC++ +N T +D Y +P+ + +++ A+G + F+D GYN + + ED
Sbjct: 721 KKNGKVRVCIDFWDLNKATPKDKYPMPVADQLVDAASGHKILSFMDGNAGYNQIFMAEED 780

Query: 135 QHKI-------------*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCV 7
HK VMP GL ++ T QR M++ F + + + +Y+DD+ V
Sbjct: 781 IHKTAFRCTGAISLFEWVVMPFGLKSIGATYQRAMNYIFHDLIGWLVEVYIDDVVV 836


>tr|A7QJX4|A7QJX4_VITVI Chromosome undetermined scaffold_108, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00000833001 PE=4 SV=1
Length = 1615

Score = 102 bits (255), Expect = 8e-21
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 29/192 (15%)
Frame = -1

Query: 492 ICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVPK 313
+C H I +++D P + N ++ E+ KL Q IY I + WVSP VVPK
Sbjct: 712 VCTHHIYMEDDAKPVRQPQRRLNPHMQEVVRSEVLKLLQAGIIYPISDSLWVSPTQVVPK 771

Query: 312 *N------------------DRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYK 187
+ R RVC++ + +NS T +D++ LP + V+ER +G Y
Sbjct: 772 KSGITVIQNEKGEEVSTRPTSRWRVCIDYRRLNSVTRKDHFPLPFMDQVLERVSGHPFYC 831

Query: 186 FLDDFLGYN*LTIKLEDQHKI*V-----------MPLGLTNVPTTCQRIMSHAFKEYLRQ 40
FLD + GY + I LEDQ K MP GL N P T QR M F + + +
Sbjct: 832 FLDGYSGYFQIEIDLEDQEKTTFTCPFGTFAYRRMPFGLCNAPATSQRCMLSIFSDMVER 891

Query: 39 FLVIYMDDLCVH 4
+ ++MDD+ V+
Sbjct: 892 IMEVFMDDITVY 903


>tr|A5BSV0|A5BSV0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_015119 PE=4 SV=1
Length = 2077

Score = 102 bits (255), Expect = 8e-21
Identities = 53/165 (32%), Positives = 94/165 (56%)
Frame = -1

Query: 495 SICQHMIPLKNDVTPCQHHPYTFNKIFARKIKEEIDKLKQIEFIYMIEHTEWVSPIVVVP 316
SI QH +PL P + + ++ ++KEEI K + F+ ++E+ EW++ +V VP
Sbjct: 1199 SIVQHRLPLLPXARPVKQKLRRLHPRWSLQVKEEIQKQLSVGFLSVVEYPEWLANVVPVP 1258

Query: 315 K*NDRLRVCVNIK*VNSTTIRDNYTLPITNHVIERAAGKEDYKFLDDFLGYN*LTIKLED 136
K + ++RVCV+ + +N + +D++ LP + +++ AG F+D F GY+ + + ED
Sbjct: 1259 KKDGKVRVCVDFRDLNKASPKDDFPLPHIDMLVDSTAGHSMLSFMDGFSGYSQILMAPED 1318

Query: 135 QHKI*VMPLGLTNVPTTCQRIMSHAFKEYLRQFLVIYMDDLCVHS 1
K VMP GL N T QR + F + + + + +Y+DD+ V S
Sbjct: 1319 MEKT-VMPFGLKNAGATYQRAATTLFHDMMHRDVEVYVDDMIVKS 1362