DK944463 |
Clone id |
YMU02A01NGRL0006_C09 |
Library |
YMU02 |
Length |
401 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_C09. 5' end sequence. |
Accession |
DK944463 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
ATGTCTGCCGTGCCTACGAAGGTTGTCCTACCCTACATGCTGGGCTCCTTCGCCCTCGCT TACGTTTTCTGGGATGTTACCCGGCACAAGAAGATCTTTGGAGGTACTGTTCCGCGTACC CTCACAAAAGAATGGGAAGAAGCGACAGCAAGGAAGTTTGATGAAGGCTGGCCCCGGGTT GCTGGTCCACCAGTGGTCATGAATCCCCTGACTCGACAGAACTACAGACTCGTTGAGGCA GAGGAGGAGTGAGGCAGAGGGGGGTAGAGAAAAAACATCTTCTTCTTTTTAAGTGCCACG AGCAGAAGTTTCTAGTAACGACATATCTGATTGGTGTACACTCTGGTCGACAGAATAAAT GCTTTTTATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P06810 |
Definition |
sp|P06810|COX5_NEUCR Cytochrome c oxidase polypeptide 5, mitochondrial OS=Neurospora crassa |
Align length |
43 |
Score (bit) |
31.6 |
E-value |
1.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P9Z0 |
Definition |
tr|A9P9Z0|A9P9Z0_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
71 |
Score (bit) |
85.5 |
E-value |
1.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944463|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0006_C09, 5' (372 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P9Z0|A9P9Z0_POPTR Putative uncharacterized protein OS=Popul... 86 1e-15 tr|A9TZZ1|A9TZZ1_PHYPA Predicted protein OS=Physcomitrella paten... 84 3e-15 tr|A9PAX5|A9PAX5_POPTR Putative uncharacterized protein OS=Popul... 84 5e-15 tr|A9NLC3|A9NLC3_PICSI Putative uncharacterized protein OS=Picea... 83 6e-15 tr|Q9LWT2|Q9LWT2_ORYSJ Os06g0114500 protein OS=Oryza sativa subs... 79 1e-13 tr|B4YYB3|B4YYB3_THEHA ST103-2 OS=Thellungiella halophila PE=4 SV=1 79 1e-13 tr|A2Y8J3|A2Y8J3_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|Q2HIQ2|Q2HIQ2_ARATH At1g01170 OS=Arabidopsis thaliana PE=4 SV=1 79 1e-13 tr|Q8GXJ9|Q8GXJ9_ARATH Putative uncharacterized protein At1g0117... 77 3e-13 tr|Q01IC8|Q01IC8_ORYSA OSIGBa0092E01.7 protein (H0306B06.11 prot... 76 9e-13 tr|A6N1R6|A6N1R6_ORYSI Atozi1 (Fragment) OS=Oryza sativa subsp. ... 76 9e-13 tr|A2XV48|A2XV48_ORYSI Putative uncharacterized protein OS=Oryza... 76 9e-13 tr|Q9M4S0|Q9M4S0_ORYSA Stress-inducible protein OS=Oryza sativa ... 75 2e-12 tr|Q9LWS6|Q9LWS6_ORYSJ Os06g0115100 protein OS=Oryza sativa subs... 75 2e-12 tr|Q7XQH9|Q7XQH9_ORYSJ OSJNBa0067K08.15 protein (Putative unchar... 75 2e-12 tr|Q0JC18|Q0JC18_ORYSJ Os04g0497300 protein OS=Oryza sativa subs... 75 2e-12 tr|A2Y8J7|A2Y8J7_ORYSI Putative uncharacterized protein OS=Oryza... 75 2e-12 tr|B6SHY0|B6SHY0_MAIZE ATOZI1 OS=Zea mays PE=4 SV=1 74 4e-12 tr|Q53PM1|Q53PM1_ORYSJ Ozone-responsive stress-related protein, ... 73 6e-12 tr|Q0IUE8|Q0IUE8_ORYSJ Os11g0161200 protein OS=Oryza sativa subs... 73 6e-12 tr|A2ZBR8|A2ZBR8_ORYSI Putative uncharacterized protein OS=Oryza... 73 6e-12 tr|A2ZBS0|A2ZBS0_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|Q38842|Q38842_ARATH ATOZI1 protein (Stress-induced protein OZ... 70 4e-11 tr|Q9MAL8|Q9MAL8_ARATH T25K16.16 OS=Arabidopsis thaliana PE=4 SV=1 69 1e-10 tr|Q6K1X2|Q6K1X2_ORYSJ Os02g0609200 protein OS=Oryza sativa subs... 68 2e-10 tr|A2X725|A2X725_ORYSI Putative uncharacterized protein OS=Oryza... 68 2e-10 tr|A7QBK1|A7QBK1_VITVI Chromosome chr13 scaffold_74, whole genom... 66 8e-10 tr|A4S3B7|A4S3B7_OSTLU Predicted protein OS=Ostreococcus lucimar... 41 0.034 tr|B4V3K4|B4V3K4_9ACTO Putative uncharacterized protein OS=Strep... 35 1.9 tr|B2CNB2|B2CNB2_9HEPC Polyprotein OS=Hepatitis C virus subtype ... 34 3.2
>tr|A9P9Z0|A9P9Z0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 79
Score = 85.5 bits (210), Expect = 1e-15 Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%) Frame = +1
Query: 16 TKVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTLT-KEWEEATARKFDEGWPRVAGPP 192 TK ++ ++GSFA+AYV V KKIFGGT PRT++ KEW E T +KF + WPR GPP Sbjct: 3 TKYIVSALVGSFAIAYVCDYVVSDKKIFGGTTPRTVSNKEWWEETDKKF-QAWPRTGGPP 61
Query: 193 VVMNPLTRQNY 225 VVMNP+TRQN+ Sbjct: 62 VVMNPITRQNF 72
>tr|A9TZZ1|A9TZZ1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199922 PE=4 SV=1 Length = 79
Score = 84.3 bits (207), Expect = 3e-15 Identities = 37/71 (52%), Positives = 53/71 (74%), Gaps = 1/71 (1%) Frame = +1
Query: 16 TKVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTL-TKEWEEATARKFDEGWPRVAGPP 192 +KV++P + G+ ++Y FWD++R++K+FGGTVP T EWE+ T +K D WPR A P Sbjct: 7 SKVIMPALAGTCVVSYAFWDLSRNRKLFGGTVPITAQNSEWEKETGKKLD-AWPREAAGP 65
Query: 193 VVMNPLTRQNY 225 VVMNP++RQNY Sbjct: 66 VVMNPISRQNY 76
>tr|A9PAX5|A9PAX5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 79
Score = 83.6 bits (205), Expect = 5e-15 Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 1/71 (1%) Frame = +1
Query: 16 TKVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTLT-KEWEEATARKFDEGWPRVAGPP 192 T + ++GSFALAYV + KKIFGGT PRT++ KEW E T RKF + WPR GPP Sbjct: 3 TTYIASAIVGSFALAYVCDHLVSDKKIFGGTTPRTVSNKEWWEETDRKF-QAWPRTGGPP 61
Query: 193 VVMNPLTRQNY 225 VVMNP+TRQN+ Sbjct: 62 VVMNPITRQNF 72
>tr|A9NLC3|A9NLC3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 81
Score = 83.2 bits (204), Expect = 6e-15 Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 1/70 (1%) Frame = +1
Query: 19 KVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTLT-KEWEEATARKFDEGWPRVAGPPV 195 KVV+ ++GS +YV +DV HK IFGG+VPRT+ K W E T +KF + WPR AGPPV Sbjct: 4 KVVISSLVGSLVASYVVYDVISHKMIFGGSVPRTVADKGWWEETDKKF-QAWPREAGPPV 62
Query: 196 VMNPLTRQNY 225 VMNP++RQN+ Sbjct: 63 VMNPISRQNF 72
>tr|Q9LWT2|Q9LWT2_ORYSJ Os06g0114500 protein OS=Oryza sativa subsp. japonica GN=P0541H01.27 PE=4 SV=1 Length = 79
Score = 79.0 bits (193), Expect = 1e-13 Identities = 38/70 (54%), Positives = 51/70 (72%), Gaps = 1/70 (1%) Frame = +1
Query: 19 KVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTLT-KEWEEATARKFDEGWPRVAGPPV 195 K + ++GSFA++YV KKIFGGT P T++ KEW +AT +KF + WPR AGPPV Sbjct: 4 KYIAAGLVGSFAISYVCDHFIAEKKIFGGTTPHTVSDKEWWQATDKKF-QAWPRTAGPPV 62
Query: 196 VMNPLTRQNY 225 VMNP++RQN+ Sbjct: 63 VMNPISRQNF 72
>tr|B4YYB3|B4YYB3_THEHA ST103-2 OS=Thellungiella halophila PE=4 SV=1 Length = 85
Score = 79.0 bits (193), Expect = 1e-13 Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +1
Query: 4 SAVPTKVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTLT-KEWEEATARKFDEGWPRV 180 +A K ++ ++GSF ++YVF + KIFGGT P T++ KEW +AT KF + WPR Sbjct: 5 AAGQAKYIIGALIGSFGISYVFDKLISDNKIFGGTTPGTVSNKEWWKATDEKF-QAWPRT 63
Query: 181 AGPPVVMNPLTRQNY 225 AGPPVVMNP++RQN+ Sbjct: 64 AGPPVVMNPISRQNF 78
>tr|A2Y8J3|A2Y8J3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21374 PE=4 SV=1 Length = 79
Score = 79.0 bits (193), Expect = 1e-13 Identities = 38/70 (54%), Positives = 51/70 (72%), Gaps = 1/70 (1%) Frame = +1
Query: 19 KVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTLT-KEWEEATARKFDEGWPRVAGPPV 195 K + ++GSFA++YV KKIFGGT P T++ KEW +AT +KF + WPR AGPPV Sbjct: 4 KYIAAGLVGSFAISYVCDHFIAEKKIFGGTTPHTVSDKEWWQATDKKF-QAWPRTAGPPV 62
Query: 196 VMNPLTRQNY 225 VMNP++RQN+ Sbjct: 63 VMNPISRQNF 72
>tr|Q2HIQ2|Q2HIQ2_ARATH At1g01170 OS=Arabidopsis thaliana PE=4 SV=1 Length = 83
Score = 78.6 bits (192), Expect = 1e-13 Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 1/70 (1%) Frame = +1
Query: 19 KVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTLT-KEWEEATARKFDEGWPRVAGPPV 195 K ++ ++GSF ++Y+F V KIFGGT P T++ KEW AT KF + WPR AGPPV Sbjct: 8 KYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKF-QAWPRTAGPPV 66
Query: 196 VMNPLTRQNY 225 VMNP++RQN+ Sbjct: 67 VMNPISRQNF 76
>tr|Q8GXJ9|Q8GXJ9_ARATH Putative uncharacterized protein At1g01170/F6F3_5 OS=Arabidopsis thaliana GN=At1g01170/F6F3_5 PE=4 SV=1 Length = 83
Score = 77.4 bits (189), Expect = 3e-13 Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%) Frame = +1
Query: 19 KVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTLT-KEWEEATARKFDEGWPRVAGPPV 195 K ++ ++GS+ ++Y+F V KIFGGT P T++ KEW AT KF + WPR AGPPV Sbjct: 8 KYIIGALIGSYGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKF-QAWPRTAGPPV 66
Query: 196 VMNPLTRQNY 225 VMNP++RQN+ Sbjct: 67 VMNPISRQNF 76
>tr|Q01IC8|Q01IC8_ORYSA OSIGBa0092E01.7 protein (H0306B06.11 protein) OS=Oryza sativa GN=OSIGBa0092E01.7 PE=4 SV=1 Length = 89
Score = 75.9 bits (185), Expect = 9e-13 Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Frame = +1
Query: 16 TKVVLPYMLGSFALAYVFWDVTRHKKIFGGTVPRTLT-KEWEEATARKFDEGWPRVAGPP 192 TK ++ + SFA AYV KK+ GGT PRT+ KEW + T K D WPRVAG P Sbjct: 3 TKYIVGSVTASFAFAYVCGVYFADKKVLGGTTPRTVADKEWGKVTEEKLD-AWPRVAGKP 61
Query: 193 VVMNPLTRQNYRLVE 237 V MNP+TRQNY LV+ Sbjct: 62 VAMNPVTRQNYVLVK 76
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