DK944704
Clone id YMU02A01NGRL0006_P01
Library
Length 439
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_P01. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
TGACTCCCATTTTTTGCAGTACAAAACAATAAAAAAATGTGGTTGTAATAGAAGCAATGT
GAAGGTGTGGGACATGAAGTTATGTTTCACTTCTGAAGTTTCTAAAAATGTTATCCATGG
TTCGAGTACGAGTGATCTGGTGTTGTGCAATACCGAAGTGAGTAGTTATTCTAAAGCTTT
AATTGATAGAAAGTTCTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTT
TTGGGCCCCCCCGCCCCCCGAAAAGTTTTTTAAACCTTTCTTTTGGGGCGGGGCCCCGGT
AGGAAAGTAAAAATGGCCTTACTTTTTCCCAAGAAAACCCGGGCCATAACGGGGGCTGGA
ATTCCCACCAAAAAAAAAC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944704|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_P01, 5'
(200 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B4M5B7
Definition tr|B4M5B7|B4M5B7_DROVI GJ10061 OS=Drosophila virilis
Align length 48
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944704|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_P01, 5'
(200 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4M5B7|B4M5B7_DROVI GJ10061 OS=Drosophila virilis GN=GJ10061 ... 33 9.2

>tr|B4M5B7|B4M5B7_DROVI GJ10061 OS=Drosophila virilis GN=GJ10061
PE=4 SV=1
Length = 280

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2

Query: 14 LQYKTIKKCGCNRSNVKVWDMKLCFTSEVSKNVIHGSSTSDLVLCNTE 157
L YKT+ C ++ ++ D ++C K +G S LV+ N E
Sbjct: 195 LSYKTLDNAKCKQTMTQLTDTEICALERFGKGACNGDSGGPLVMANGE 242