DK944751
Clone id YMU02A01NGRL0007_B11
Library
Length 589
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_B11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
CAGCTCATCTGTTGTAAATACGGTTTAGTTTCCTTTTATTGCAAAGGGTGGAGGACCCTA
TGGTCAAGAAGTTACCAGAGGCTTGGATCATCTTTCAGGGAAATACTTTAGTGGAAAAAC
TCTCATCAAGCAGGATTTCAAAGCGGTATGAATGTTTATCTGCTGCATGTGTGTATGAGA
GAGAGACAGAGAGAGAGGCACACTCATGGGGGTCGAGGTAGAGCTGTGGAGGGATTTTGC
CGGTGGGTTGACTTCTTCATTTGCGACCACCTCATTTTAGAGGATGACAGGATCATGATT
ATACCGCCGCCACTATGCATGTGTGATGCAAGAGACCTAAGAGCAGCCAGGAGCAAGAAG
CAACTATGAGAGATCGAGGGTGCAGGAGCTACGTTGAAGAGGCTTAGAGAATAGAGCTTC
AGATAAGATGGTGGCTGATGTTTAATTAATAGATGCCCTGACCGCAGTTCAAGGTAGCTC
CATATCATACGCAATGCGGTACCCCGAGCCCGACCAGATCAAAGCAGGCATGAGTGCTCA
GAAACTTGAAAGCTAGGAGTTTTTGCCCACATATAATTGAGGTTCTGTG
■■Homology search results ■■ -
sp_hit_id O22160
Definition sp|O22160|TL15A_ARATH Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana
Align length 33
Score (bit) 53.9
E-value 6.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944751|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_B11, 5'
(589 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O22160|TL15A_ARATH Thylakoid lumenal 15 kDa protein 1, chloro... 54 6e-07
sp|P82657|TL11_SPIOL Thylakoid lumenal 11 kDa protein (Fragment)... 35 0.21
sp|Q6BEA0|PLXA4_DANRE Plexin-A4 OS=Danio rerio GN=plxna4 PE=2 SV=1 30 6.8
sp|P82322|UT103_PEA Unknown protein from spot 103 of 2D-PAGE of ... 30 9.0

>sp|O22160|TL15A_ARATH Thylakoid lumenal 15 kDa protein 1,
chloroplastic OS=Arabidopsis thaliana GN=At2g44920 PE=1
SV=2
Length = 224

Score = 53.9 bits (128), Expect = 6e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYFSGKTLIKQDFK 142
KGGGPYGQ VTRG D LSGK FSG+TLI+QDFK
Sbjct: 83 KGGGPYGQGVTRGQD-LSGKDFSGQTLIRQDFK 114


>sp|P82657|TL11_SPIOL Thylakoid lumenal 11 kDa protein (Fragment)
OS=Spinacia oleracea PE=1 SV=1
Length = 22

Score = 35.4 bits (80), Expect = 0.21
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYF 109
KGGGPYGQ VTRG D LSGK F
Sbjct: 2 KGGGPYGQGVTRGQD-LSGKDF 22


>sp|Q6BEA0|PLXA4_DANRE Plexin-A4 OS=Danio rerio GN=plxna4 PE=2 SV=1
Length = 1903

Score = 30.4 bits (67), Expect = 6.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3

Query: 33 LLLQRVEDPMVKKLPEAWIIFQGNT 107
L + VEDP + KL W IF GNT
Sbjct: 1041 LKFEYVEDPTITKLEPEWSIFSGNT 1065


>sp|P82322|UT103_PEA Unknown protein from spot 103 of 2D-PAGE of
thylakoid (Fragment) OS=Pisum sativum PE=1 SV=1
Length = 14

Score = 30.0 bits (66), Expect = 9.0
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2

Query: 44 KGGGPYGQEVTRG 82
KGGGPYGQ VTRG
Sbjct: 2 KGGGPYGQGVTRG 14


tr_hit_id Q9ARP1
Definition tr|Q9ARP1|Q9ARP1_ORYSJ cDNA clone:001-008-F11, full insert sequence OS=Oryza sativa subsp. japonica
Align length 33
Score (bit) 54.3
E-value 5.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944751|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_B11, 5'
(589 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9ARP1|Q9ARP1_ORYSJ cDNA clone:001-008-F11, full insert seque... 54 5e-06
tr|B8AD81|B8AD81_ORYSI Putative uncharacterized protein OS=Oryza... 54 5e-06
tr|A7PIQ4|A7PIQ4_VITVI Chromosome chr13 scaffold_17, whole genom... 54 5e-06
tr|A5BEJ1|A5BEJ1_VITVI Putative uncharacterized protein OS=Vitis... 54 5e-06
tr|A2ZP56|A2ZP56_ORYSJ Putative uncharacterized protein OS=Oryza... 54 5e-06
tr|B6SK74|B6SK74_MAIZE Uncharacterized low-complexity proteins O... 54 7e-06
tr|A9P046|A9P046_PICSI Putative uncharacterized protein OS=Picea... 54 7e-06
tr|A9SAY8|A9SAY8_PHYPA Predicted protein (Fragment) OS=Physcomit... 52 3e-05
tr|A9V493|A9V493_MONBE Predicted protein OS=Monosiga brevicollis... 34 5.4
tr|A4Y6N6|A4Y6N6_SHEPC Putative uncharacterized protein OS=Shewa... 34 7.1
tr|A1RJU5|A1RJU5_SHESW Putative uncharacterized protein OS=Shewa... 34 7.1
tr|A2UZG6|A2UZG6_SHEPU Putative uncharacterized protein OS=Shewa... 34 7.1

>tr|Q9ARP1|Q9ARP1_ORYSJ cDNA clone:001-008-F11, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0024G09.30 PE=2 SV=1
Length = 198

Score = 54.3 bits (129), Expect = 5e-06
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYFSGKTLIKQDFK 142
KGGGPYGQ+VTRG D L+GK FSG+TLI+QDFK
Sbjct: 57 KGGGPYGQQVTRGQD-LTGKDFSGQTLIRQDFK 88


>tr|B8AD81|B8AD81_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_00358 PE=4 SV=1
Length = 191

Score = 54.3 bits (129), Expect = 5e-06
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYFSGKTLIKQDFK 142
KGGGPYGQ+VTRG D L+GK FSG+TLI+QDFK
Sbjct: 57 KGGGPYGQQVTRGQD-LTGKDFSGQTLIRQDFK 88


>tr|A7PIQ4|A7PIQ4_VITVI Chromosome chr13 scaffold_17, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00018433001
PE=4 SV=1
Length = 221

Score = 54.3 bits (129), Expect = 5e-06
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYFSGKTLIKQDFK 142
KGGGPYG EVTRG D L+GK FSGK+LIKQDFK
Sbjct: 80 KGGGPYGAEVTRGQD-LTGKDFSGKSLIKQDFK 111


>tr|A5BEJ1|A5BEJ1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013914 PE=4 SV=1
Length = 221

Score = 54.3 bits (129), Expect = 5e-06
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYFSGKTLIKQDFK 142
KGGGPYG EVTRG D L+GK FSGK+LIKQDFK
Sbjct: 80 KGGGPYGAEVTRGQD-LTGKDFSGKSLIKQDFK 111


>tr|A2ZP56|A2ZP56_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_000328 PE=4 SV=1
Length = 550

Score = 54.3 bits (129), Expect = 5e-06
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYFSGKTLIKQDFK 142
KGGGPYGQ+VTRG D L+GK FSG+TLI+QDFK
Sbjct: 57 KGGGPYGQQVTRGQD-LTGKDFSGQTLIRQDFK 88


>tr|B6SK74|B6SK74_MAIZE Uncharacterized low-complexity proteins
OS=Zea mays PE=2 SV=1
Length = 220

Score = 53.9 bits (128), Expect = 7e-06
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYFSGKTLIKQDFK 142
KGGGPYGQ VTRG D LSGK FSG+TLI+QDFK
Sbjct: 79 KGGGPYGQGVTRGQD-LSGKDFSGQTLIRQDFK 110


>tr|A9P046|A9P046_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 237

Score = 53.9 bits (128), Expect = 7e-06
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYFSGKTLIKQDFK 142
KGGGPYG EVTRG D LSGK FSGK LI+QDFK
Sbjct: 97 KGGGPYGAEVTRGAD-LSGKDFSGKNLIQQDFK 128


>tr|A9SAY8|A9SAY8_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_126894 PE=4 SV=1
Length = 165

Score = 52.0 bits (123), Expect = 3e-05
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +2

Query: 44 KGGGPYGQEVTRGLDHLSGKYFSGKTLIKQDFK 142
+GGGPYGQEVTRG D L+G+ +SG TLIKQDFK
Sbjct: 24 RGGGPYGQEVTRGQD-LTGRDYSGLTLIKQDFK 55


>tr|A9V493|A9V493_MONBE Predicted protein OS=Monosiga brevicollis
GN=33227 PE=4 SV=1
Length = 405

Score = 34.3 bits (77), Expect = 5.4
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -2

Query: 234 SLHSSTSTPMSVPLSLSLSHTHMQQINIHTALKSCL 127
SL S S P+ + LSLSLSHTH + HT CL
Sbjct: 83 SLSLSLSQPIHLSLSLSLSHTHNTHTHTHTHPHLCL 118


>tr|A4Y6N6|A4Y6N6_SHEPC Putative uncharacterized protein OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453)
GN=Sputcn32_1896 PE=4 SV=1
Length = 1305

Score = 33.9 bits (76), Expect = 7.1
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1

Query: 211 GRGRAVEGFCRWVDFFICDHLILEDDRIMIIPPPLCMCD-ARDLRAARSKKQL*EIEG 381
G GR V G RW L +E D++ +I PPL + D + DL + S +QL E++G
Sbjct: 967 GLGR-VSGNLRWPQGLFSGELAIEGDKLAVIQPPLAILDISPDLTLSFSSEQL-EVKG 1022