DK945067 |
Clone id |
YMU02A01NGRL0008_B22 |
Library |
YMU02 |
Length |
654 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_B22. 5' end sequence. |
Accession |
DK945067 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GCGGTTGGATTTCTTTGGAGCGTGTTTGACACCGTGCTCGCAGTGTGCCTCAGAGGTGCT CCTCACTCGATTTCTCTCCGAGTGGTTGGTGACACACACAGTGATCAGATGGACGAAGAG GAAGAAACCCGCATGGTTCATCTAACCGAAACACAACCTGATGACTCTTTTGCTATGGTA GAAGACGCACATATTGATAGGATAGAGGATGCTCTTGCTGCAATTTTGAAAGAATTACTT GGAGACCAAAGCAGAAACACAACTTCACTACGGTCAGAAGTTATTGAAGCGATACATAAT TCAAGAAACACAATTGAGGAGTATGCAATCAATGTTGCGGATGTGCAAGTCACAAAGCTG GAAGAGCAAATTTTCTCGTTCGGCAAAGAACTAATGGCTTTGAAAGCACAAGTCAACCGG TTAAACGCGATACTATCTAGGTTCTCGAATATGCTAAATCGCAACCAGAATGCATGATAA ATTTTGCACAGCGTATCTNAACTTTTGGCGCATTGTAATGATGTAAATGAAGCAAATTTT GTGGATAGTTTAACCTTCTTGTCTGTACAAAAAATGTAGCTCCTTCGATTATGCAATGTA CAGACTGTTTAACAGAATCTTCGTCTTTGTGAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9JIM0 |
Definition |
sp|Q9JIM0|MRE11_RAT Double-strand break repair protein MRE11A OS=Rattus norvegicus |
Align length |
76 |
Score (bit) |
37.7 |
E-value |
0.05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q41440 |
Definition |
tr|Q41440|Q41440_SOLTU Mitochondrial processing peptidase OS=Solanum tuberosum |
Align length |
111 |
Score (bit) |
38.5 |
E-value |
0.34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945067|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_B22, 5' (631 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q41440|Q41440_SOLTU Mitochondrial processing peptidase OS=Sol... 39 0.34 tr|A9SCZ4|A9SCZ4_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.34 tr|B3LJ65|B3LJ65_YEAS1 Putative uncharacterized protein OS=Sacch... 38 0.57 tr|Q3URU4|Q3URU4_MOUSE Meiotic recombination 11 homolog A (S. ce... 38 0.58 tr|Q3UJN6|Q3UJN6_MOUSE Putative uncharacterized protein OS=Mus m... 38 0.58 tr|B2KF78|B2KF78_MOUSE Meiotic recombination 11 homolog A (S. ce... 38 0.58 tr|Q97H95|Q97H95_CLOAB Cell division protein DivIVA OS=Clostridi... 37 0.76 tr|Q895M7|Q895M7_CLOTE Chromosome segregation protein smc2 OS=Cl... 37 0.76 tr|A9U3K2|A9U3K2_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.76 tr|A4VDC9|A4VDC9_TETTH Myosin-10, putative OS=Tetrahymena thermo... 37 0.76 tr|A9A0R0|A9A0R0_DESOH AAA ATPase containing von Willebrand fact... 37 0.99 tr|A0ND51|A0ND51_ANOGA AGAP002688-PA (Fragment) OS=Anopheles gam... 37 0.99 tr|A0E0X2|A0E0X2_PARTE Chromosome undetermined scaffold_72, whol... 37 0.99 tr|B2W744|B2W744_PYRTR Putative uncharacterized protein OS=Pyren... 37 0.99 tr|Q2AAA6|Q2AAA6_ASPOF Putative uncharacterized protein OS=Aspar... 37 1.3 tr|A1AT62|A1AT62_PELPD MutS2 family protein OS=Pelobacter propio... 36 1.7 tr|A8SE24|A8SE24_9FIRM Putative uncharacterized protein OS=Faeca... 36 1.7 tr|A9RN46|A9RN46_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.7 tr|Q4UAB2|Q4UAB2_THEAN RNA-binding protein, putative OS=Theileri... 36 1.7 tr|Q4MZ16|Q4MZ16_THEPA Putative uncharacterized protein OS=Theil... 36 1.7 tr|A8Q8C3|A8Q8C3_BRUMA Hypothetical 26.6 kDa protein T19C3.4 in ... 36 1.7 tr|A0DM21|A0DM21_PARTE Chromosome undetermined scaffold_56, whol... 36 1.7 tr|Q9FMN1|Q9FMN1_ARATH Genomic DNA, chromosome 5, P1 clone:MBD2 ... 36 2.2 tr|Q8SXK8|Q8SXK8_DROME RE11224p OS=Drosophila melanogaster GN=CG... 36 2.2 tr|Q8IMB9|Q8IMB9_DROME CG1674, isoform B OS=Drosophila melanogas... 36 2.2 tr|B3KTC7|B3KTC7_HUMAN cDNA FLJ38069 fis, clone CTONG2015434, hi... 36 2.2 tr|Q0W387|Q0W387_UNCMA Putative uncharacterized protein OS=Uncul... 36 2.2 tr|B5VRR2|B5VRR2_YEAS6 YOR009Wp-like protein (Fragment) OS=Sacch... 35 2.8 tr|B4X3F8|B4X3F8_9GAMM Putative uncharacterized protein OS=Alcan... 35 2.9 tr|A6UV83|A6UV83_META3 Putative uncharacterized protein OS=Metha... 35 2.9
>tr|Q41440|Q41440_SOLTU Mitochondrial processing peptidase OS=Solanum tuberosum GN=MPP PE=2 SV=1 Length = 504
Score = 38.5 bits (88), Expect = 0.34 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 6/111 (5%) Frame = +1
Query: 130 RMVHLTETQPDDSFAMVEDAHIDRIEDALAAILK---ELLGDQSRNTTSLRSEVIEAIHN 300 R+V E + A H+ DAL + ELL D RN L EV E + Sbjct: 135 RIVREVEAIGGNVTAAASREHLIYTYDALKTYVPQMVELLVDSVRNPAFLDWEVSEQLEK 194
Query: 301 SRNTIEEYAINVADVQVTKLEEQIFS--FGKELMALKAQVNRLNA-ILSRF 444 ++ I+EY N + + + +S +G L A +A VNRLN+ +L F Sbjct: 195 VKSEIDEYTKNPQHLLLEAVHSAGYSGPYGNSLAATEATVNRLNSTVLEEF 245
>tr|A9SCZ4|A9SCZ4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_77703 PE=4 SV=1 Length = 133
Score = 38.5 bits (88), Expect = 0.34 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = +1
Query: 193 IDRIEDALAAILKELLGDQSRNTTSLRSEVIEAIHNSRNTIEEYAINVADVQVTKLEEQI 372 ++R + L K +L DQ R T IEA++ +EE +N+ Q+ KLE Q+ Sbjct: 29 MEREKAELLVQKKLVLSDQYRCETERLKAKIEALNAKVTRLEEDLVNIGQAQIPKLEAQV 88
Query: 373 FSFGKELMALKAQVNR 420 GK L AQ+ + Sbjct: 89 RELGKYNEDLSAQLKQ 104
>tr|B3LJ65|B3LJ65_YEAS1 Putative uncharacterized protein OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SCRG_01412 PE=4 SV=1 Length = 487
Score = 37.7 bits (86), Expect = 0.57 Identities = 30/103 (29%), Positives = 53/103 (51%) Frame = -3
Query: 467 WLRFSIFENLDSIAFNRLTCAFKAISSLPNEKICSSSFVTCTSATLIAYSSIVFLELCIA 288 W + L+++ + T + A SS ++ SSS + TS+++ SS E+ + Sbjct: 98 WYSSRLLPELEAMDASLTTSSSAATSS---SEVASSSIASSTSSSVAPSSS----EVVSS 150
Query: 287 SITSDRSEVVFLLWSPSNSFKIAARASSILSICASSTIAKESS 159 S+ SEVV +PS+S +++ +S S ASS++A SS Sbjct: 151 SVAPSSSEVVSSSVAPSSSEVVSSSVASSSSEVASSSVAPSSS 193
>tr|Q3URU4|Q3URU4_MOUSE Meiotic recombination 11 homolog A (S. cerevisiae) OS=Mus musculus GN=Mre11a PE=2 SV=1 Length = 706
Score = 37.7 bits (86), Expect = 0.58 Identities = 20/76 (26%), Positives = 40/76 (52%) Frame = +1
Query: 79 RVVGDTHSDQMDEEEETRMVHLTETQPDDSFAMVEDAHIDRIEDALAAILKELLGDQSRN 258 R +G+ + +D+EE+ + L + Q + + +++ HID +ED + ++ + RN Sbjct: 453 RGMGEAVQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRESRQRN 512
Query: 259 TTSLRSEVIEAIHNSR 306 T EV EA+ +R Sbjct: 513 TNEEDDEVREAMSRAR 528
>tr|Q3UJN6|Q3UJN6_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Mre11a PE=2 SV=1 Length = 679
Score = 37.7 bits (86), Expect = 0.58 Identities = 20/76 (26%), Positives = 40/76 (52%) Frame = +1
Query: 79 RVVGDTHSDQMDEEEETRMVHLTETQPDDSFAMVEDAHIDRIEDALAAILKELLGDQSRN 258 R +G+ + +D+EE+ + L + Q + + +++ HID +ED + ++ + RN Sbjct: 426 RGMGEAVQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRESRQRN 485
Query: 259 TTSLRSEVIEAIHNSR 306 T EV EA+ +R Sbjct: 486 TNEEDDEVREAMSRAR 501
>tr|B2KF78|B2KF78_MOUSE Meiotic recombination 11 homolog A (S. cerevisiae) OS=Mus musculus GN=Mre11a PE=4 SV=1 Length = 679
Score = 37.7 bits (86), Expect = 0.58 Identities = 20/76 (26%), Positives = 40/76 (52%) Frame = +1
Query: 79 RVVGDTHSDQMDEEEETRMVHLTETQPDDSFAMVEDAHIDRIEDALAAILKELLGDQSRN 258 R +G+ + +D+EE+ + L + Q + + +++ HID +ED + ++ + RN Sbjct: 426 RGMGEAVQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRESRQRN 485
Query: 259 TTSLRSEVIEAIHNSR 306 T EV EA+ +R Sbjct: 486 TNEEDDEVREAMSRAR 501
>tr|Q97H95|Q97H95_CLOAB Cell division protein DivIVA OS=Clostridium acetobutylicum GN=CA_C2118 PE=4 SV=1 Length = 205
Score = 37.4 bits (85), Expect = 0.76 Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 3/126 (2%) Frame = +1
Query: 91 DTHSDQMDEEEETRMVHLTETQPDDSFAMVEDAHIDRIEDAL--AAILKELLGDQSRNTT 264 D DQ+ E E +E + +S + AH ++IED + IL + +Q++ + Sbjct: 28 DQFLDQVSENYEQLYKENSELKERNSILKEKLAHYEKIEDTIQNTLILAQNAAEQAKQSA 87
Query: 265 SLRSEVIEAIHNSRNTIEEYAINVADVQVTKLEEQIFSFGKELMALKAQV-NRLNAILSR 441 S++I + N+ +T + I+ A+ V K+ + + ++ M +A+ N +N+ L Sbjct: 88 KTESDLI--LKNANDTAQR-IIDKANQDVIKINDDYDNVKQQFMRFRAKYRNFMNSQLDM 144
Query: 442 FSNMLN 459 F+++ N Sbjct: 145 FNSLEN 150
>tr|Q895M7|Q895M7_CLOTE Chromosome segregation protein smc2 OS=Clostridium tetani GN=CTC_01245 PE=4 SV=1 Length = 1186
Score = 37.4 bits (85), Expect = 0.76 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 8/74 (10%) Frame = +1
Query: 226 LKELLGD--QSRNTTSLRSEVIEAIHNSRNTIEEYAINV------ADVQVTKLEEQIFSF 381 +KEL + + N L ++VIE N +++EE +N+ D+++TKL E+++S Sbjct: 686 IKELQREIKEIENKIKLETDVIEKDKNKLSSLEENCLNLKDEIYFEDIEITKLTEKLYSI 745
Query: 382 GKELMALKAQVNRL 423 KE + LK ++ L Sbjct: 746 EKENLKLKDRMKIL 759
>tr|A9U3K2|A9U3K2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_101385 PE=4 SV=1 Length = 499
Score = 37.4 bits (85), Expect = 0.76 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = +1
Query: 193 IDRIEDALAAILKELLGDQSR-NTTSLRSEVIEAIHNSRNTIEEYAINVADVQVTKLEEQ 369 ++R + L A K +L DQ R T LR+E IEA++ + E +N+ Q+ KLE Q Sbjct: 395 MEREKAELLAQEKLVLSDQYRCETERLRAE-IEALNAEVTRLAEDLVNIGQAQILKLEAQ 453
Query: 370 IFSFGKELMALKAQVNR 420 + G+ L AQ+ R Sbjct: 454 VRELGEYNEDLSAQLRR 470
>tr|A4VDC9|A4VDC9_TETTH Myosin-10, putative OS=Tetrahymena thermophila SB210 GN=TTHERM_00215884 PE=4 SV=1 Length = 1401
Score = 37.4 bits (85), Expect = 0.76 Identities = 29/125 (23%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Frame = +1
Query: 106 QMDEEEETRMVHLTETQPD-DSFAMVEDAHIDRIEDALAAILKELLGDQSRNTTSLRSEV 282 Q+++E + + L ET+ + + I + + + ++++L Q+ SL E Sbjct: 780 QLEDENQKLRIKLNETKVQKEQIEKQLNQQIIEVNNKMQNLIQQLSQAQTEKQ-SLMQEH 838
Query: 283 IEAIHNSRNTIEEYAINVADVQVT--KLEEQIFSFGKELMALKAQVNRLNAILSRFSNML 456 +E +N ++ I + + + D+Q+ +L Q G ++ L +N+ N I ++F+NM+ Sbjct: 839 LEKENNLQSVIHQLNVQIQDLQIRIEQLLSQQIDQGTQINQLG--LNQQNIIRTQFNNMI 896
Query: 457 NRNQN 471 NQN Sbjct: 897 PLNQN 901
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