DK945245 |
Clone id |
YMU02A01NGRL0008_L04 |
Library |
YMU02 |
Length |
615 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_L04. 5' end sequence. |
Accession |
DK945245 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
ACACTAGTCATTCTACACATGAAATGGAGATGGCTAGCGTGGTGAATGGAGTACGATGTG CTGCTTTGTCTCCACGCCTGCTTCGAGCTCCTCACGACCTTAGTGCTCACACCTTCAGTG TAAGGGCGAAGAAGGCTCAGCTGCCCTCTCTCAAGTACAGAGGAGACAAGCACTCAGCAT ATCTATTAACGTCATCATCACCACCATCTTTGTTAATTTCTGCCTCTGCGCAAAAGCTCT CAGATATAGAAGCGGTCTCTCTTACTGACGATCTTTCCAAGGTTCCTGCTTCTTCTGGAA TTTACGCTATCTATGACAAGGCTGGGGACTTACAGTACATTGGGCTCACGCGAAGGCTCT CGTCAAGCCTTCAGAACCATGTCCATGACCTCCCAGAGCTTTGTGCTTCTACAAAGTTTT CCATAATAAATGCCCCAGAAAAGGCAGCACTGCTGGATGCATGGAAGCAATGGATGGAAG AACACATAAATGTCACAGGGAAGGTACCGCCAGGTAATGTGCAGGGTGTAACAACCTGGA CAGAGAGAAAGGTCAAACCAAGCAAACAGGATGTTCGGTTAACTCCTGGGACTAACACAA AGCTAAACATCCCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8H7F6 |
Definition |
sp|Q8H7F6|GRS16_ARATH Monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana |
Align length |
185 |
Score (bit) |
131.0 |
E-value |
3.0e-30 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U381 |
Definition |
tr|A9U381|A9U381_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
129 |
Score (bit) |
177.0 |
E-value |
3.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK945245|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0008_L04, 5' (615 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U381|A9U381_PHYPA Predicted protein OS=Physcomitrella paten... 177 3e-43 tr|A7QHP5|A7QHP5_VITVI Chromosome chr8 scaffold_99, whole genome... 132 2e-29 tr|B7FKA6|B7FKA6_MEDTR Putative uncharacterized protein OS=Medic... 125 3e-27 tr|B6SP07|B6SP07_MAIZE Grx_S16-glutaredoxin subgroup II OS=Zea m... 113 8e-24 tr|B4FH10|B4FH10_MAIZE Putative uncharacterized protein OS=Zea m... 113 8e-24 tr|B6UCZ2|B6UCZ2_MAIZE Grx_S16-glutaredoxin subgroup II OS=Zea m... 112 1e-23 tr|B4FDI5|B4FDI5_MAIZE Putative uncharacterized protein OS=Zea m... 111 3e-23 tr|A8HN52|A8HN52_CHLRE Glutaredoxin, CGFS type OS=Chlamydomonas ... 111 3e-23 tr|A3CFF5|A3CFF5_ORYSJ Putative uncharacterized protein OS=Oryza... 110 7e-23 tr|A2ZIK9|A2ZIK9_ORYSI Putative uncharacterized protein OS=Oryza... 110 7e-23 tr|A4RRL3|A4RRL3_OSTLU Predicted protein (Fragment) OS=Ostreococ... 99 2e-19 tr|Q01G06|Q01G06_OSTTA Glutaredoxin and related proteins (ISS) O... 89 2e-16 tr|B5W026|B5W026_SPIMA Putative uncharacterized protein OS=Arthr... 63 1e-08 tr|B7KBJ7|B7KBJ7_9CHRO Putative uncharacterized protein OS=Cyano... 61 5e-08 tr|P73146|P73146_SYNY3 Slr1035 protein OS=Synechocystis sp. (str... 61 6e-08 tr|B4VMM0|B4VMM0_9CYAN Putative uncharacterized protein OS=Micro... 61 6e-08 tr|A0YL03|A0YL03_9CYAN Putative uncharacterized protein OS=Lyngb... 58 5e-07 tr|A0ZHA1|A0ZHA1_NODSP Putative uncharacterized protein OS=Nodul... 57 9e-07 tr|B1XK00|B1XK00_SYNP2 Putative uncharacterized protein OS=Synec... 57 1e-06 tr|A5BMH5|A5BMH5_VITVI Putative uncharacterized protein OS=Vitis... 56 2e-06 tr|Q8DIK3|Q8DIK3_THEEB Tll1582 protein OS=Thermosynechococcus el... 55 4e-06 tr|B7JVS5|B7JVS5_SYNP8 Putative uncharacterized protein OS=Synec... 55 4e-06 tr|B4BVV8|B4BVV8_9CHRO Putative uncharacterized protein OS=Cyano... 55 4e-06 tr|B0C6A9|B0C6A9_ACAM1 Putative uncharacterized protein OS=Acary... 53 1e-05 tr|B2J3U1|B2J3U1_NOSP7 Putative uncharacterized protein OS=Nosto... 52 2e-05 tr|Q3MCG3|Q3MCG3_ANAVT Putative uncharacterized protein OS=Anaba... 52 3e-05 tr|B4B1L4|B4B1L4_9CHRO Putative uncharacterized protein OS=Cyano... 52 3e-05 tr|Q5N4S2|Q5N4S2_SYNP6 Putative uncharacterized protein OS=Synec... 52 4e-05 tr|Q31PE9|Q31PE9_SYNE7 Putative uncharacterized protein OS=Synec... 52 4e-05 tr|Q8YQ40|Q8YQ40_ANASP Alr3996 protein OS=Anabaena sp. (strain P... 51 6e-05
>tr|A9U381|A9U381_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155328 PE=4 SV=1 Length = 243
Score = 177 bits (450), Expect = 3e-43 Identities = 80/129 (62%), Positives = 106/129 (82%), Gaps = 1/129 (0%) Frame = +3
Query: 231 QKLSDIEAVSLTDDLS-KVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVHDLPELCA 407 +KL+++E LT++ S PA+ GIYA+YDKAGDLQYIGL+RR+S+SLQ+H+ +LPELCA Sbjct: 13 KKLAEVELTDLTNNPSPSFPAAPGIYAVYDKAGDLQYIGLSRRVSASLQSHMRELPELCA 72
Query: 408 STKFSIINAPEKAALLDAWKQWMEEHINVTGKVPPGNVQGVTTWTERKVKPSKQDVRLTP 587 S KF++++APE+AAL DAWK WMEEHIN G VPPGNV G TTWT RK + +K +++LTP Sbjct: 73 SAKFAVVDAPERAALTDAWKSWMEEHINQGGNVPPGNVSGNTTWTARKARAAKPEIKLTP 132
Query: 588 GTNTKLNIP 614 G + KLN+P Sbjct: 133 GAHVKLNVP 141
>tr|A7QHP5|A7QHP5_VITVI Chromosome chr8 scaffold_99, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038871001 PE=4 SV=1 Length = 297
Score = 132 bits (331), Expect = 2e-29 Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 4/131 (3%) Frame = +3
Query: 234 KLSDIEAVSLT----DDLSKVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVHDLPEL 401 KLS+ E + L + K P+ SG+YA+YD++ LQ+IG+TR +++S+ H +PEL Sbjct: 66 KLSETEPIPLPPAPEEIAGKFPSESGVYAVYDQSDVLQFIGITRSIAASVLAHRKSVPEL 125
Query: 402 CASTKFSIINAPEKAALLDAWKQWMEEHINVTGKVPPGNVQGVTTWTERKVKPSKQDVRL 581 C S K ++++ P++ AL AWK WMEEHI TGK+PPGN G TTW + K K D+RL Sbjct: 126 CCSVKVAVVDEPDRTALTQAWKSWMEEHIGATGKIPPGNESGNTTWVRQPPK-KKPDLRL 184
Query: 582 TPGTNTKLNIP 614 TPG +T+L +P Sbjct: 185 TPGRHTQLTVP 195
>tr|B7FKA6|B7FKA6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 228
Score = 125 bits (313), Expect = 3e-27 Identities = 53/112 (47%), Positives = 79/112 (70%) Frame = +3
Query: 279 KVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVHDLPELCASTKFSIINAPEKAALLD 458 ++P+ +G+YA+YDK G LQ+IGL+R +++++ H +PELC S K +++ P++ +L Sbjct: 85 ELPSGAGVYAVYDKNGGLQFIGLSRNIAATVLAHRKSVPELCGSLKVGVVDEPDRESLTQ 144
Query: 459 AWKQWMEEHINVTGKVPPGNVQGVTTWTERKVKPSKQDVRLTPGTNTKLNIP 614 AWK WMEEHI +TGKVPPGN G TW + K K D+RLTPG + +L +P Sbjct: 145 AWKSWMEEHIKITGKVPPGNESGNATWVRPQPK-KKADLRLTPGRHVQLTVP 195
>tr|B6SP07|B6SP07_MAIZE Grx_S16-glutaredoxin subgroup II OS=Zea mays PE=2 SV=1 Length = 292
Score = 113 bits (283), Expect = 8e-24 Identities = 53/118 (44%), Positives = 79/118 (66%), Gaps = 3/118 (2%) Frame = +3
Query: 270 DLSKVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVHDLP-ELCASTKFSIIN--APE 440 D +P +G+Y +YD AG+LQ++G++R + +S++ H +P LCAS K ++ + AP+ Sbjct: 74 DEDALPPKAGVYGVYDAAGELQFVGISRNVRASVEGHRRKVPANLCASVKVAVSDEEAPD 133
Query: 441 KAALLDAWKQWMEEHINVTGKVPPGNVQGVTTWTERKVKPSKQDVRLTPGTNTKLNIP 614 ++AL +AWK WMEEHI TGK PPGNV G TW +P D+RLTPG + +L +P Sbjct: 134 RSALNNAWKSWMEEHIAATGKAPPGNVAGNHTWVGAPQRP--PDLRLTPGRHVQLTVP 189
>tr|B4FH10|B4FH10_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 292
Score = 113 bits (283), Expect = 8e-24 Identities = 53/118 (44%), Positives = 79/118 (66%), Gaps = 3/118 (2%) Frame = +3
Query: 270 DLSKVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVHDLP-ELCASTKFSIIN--APE 440 D +P +G+Y +YD AG+LQ++G++R + +S++ H +P LCAS K ++ + AP+ Sbjct: 74 DEDALPPKAGVYGVYDAAGELQFVGISRNVRASVEGHRRKVPANLCASVKVAVSDEEAPD 133
Query: 441 KAALLDAWKQWMEEHINVTGKVPPGNVQGVTTWTERKVKPSKQDVRLTPGTNTKLNIP 614 ++AL +AWK WMEEHI TGK PPGNV G TW +P D+RLTPG + +L +P Sbjct: 134 RSALNNAWKSWMEEHIAATGKAPPGNVAGNHTWVGAPQRP--PDLRLTPGRHVQLTVP 189
>tr|B6UCZ2|B6UCZ2_MAIZE Grx_S16-glutaredoxin subgroup II OS=Zea mays PE=2 SV=1 Length = 292
Score = 112 bits (281), Expect = 1e-23 Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 11/139 (7%) Frame = +3
Query: 231 QKLSDIEAVSLTD--------DLSKVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVH 386 +KLS+ AV + D +P +G+Y +YD AG+LQ++G++R + +S++ H Sbjct: 52 KKLSEASAVPIPQEPTELLLVDEDALPPKAGVYGVYDPAGELQFVGISRNVRASVEGHRR 111
Query: 387 DLP-ELCASTKFSIIN--APEKAALLDAWKQWMEEHINVTGKVPPGNVQGVTTWTERKVK 557 +P LCAS K ++ + P+++AL +AWK WM+EHI TGK PPGNV G TW + Sbjct: 112 KVPANLCASVKVAVSDEETPDRSALNNAWKSWMQEHIEATGKAPPGNVAGNHTWVGGPQR 171
Query: 558 PSKQDVRLTPGTNTKLNIP 614 P D+RLTPG + +L +P Sbjct: 172 P--PDLRLTPGRHVQLTVP 188
>tr|B4FDI5|B4FDI5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 291
Score = 111 bits (278), Expect = 3e-23 Identities = 51/118 (43%), Positives = 78/118 (66%), Gaps = 3/118 (2%) Frame = +3
Query: 270 DLSKVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVHDLP-ELCASTKFSIIN--APE 440 D +P +G+Y +YD AG+LQ++G++R + +S++ H +P LCAS K ++ + P+ Sbjct: 73 DEDALPPKAGVYGVYDPAGELQFVGISRNVRASIEGHRRKVPANLCASVKVAVSDEETPD 132
Query: 441 KAALLDAWKQWMEEHINVTGKVPPGNVQGVTTWTERKVKPSKQDVRLTPGTNTKLNIP 614 ++AL +AWK WM+EHI TGK PPGNV G TW +P D+RLTPG + +L +P Sbjct: 133 RSALNNAWKSWMQEHIAATGKAPPGNVAGNNTWVGGPQRP--PDLRLTPGRHVQLTVP 188
>tr|A8HN52|A8HN52_CHLRE Glutaredoxin, CGFS type OS=Chlamydomonas reinhardtii GN=GRX6 PE=4 SV=1 Length = 281
Score = 111 bits (278), Expect = 3e-23 Identities = 52/121 (42%), Positives = 82/121 (67%), Gaps = 3/121 (2%) Frame = +3
Query: 237 LSDIEAVSLTD--DLSKVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVHDLPELCAS 410 L++ +AV + + +LS+ P S+G+YA+YDK G LQYIGL+R++S+S+ H+ +LP+L S Sbjct: 45 LAETKAVPVMEKGELSQFPGSAGVYAVYDKNGTLQYIGLSRKVSASVATHMQELPDLTGS 104
Query: 411 TKFSIINAPEKAALLDAWKQWMEEHINVTGKVPPGNVQGVTTWTERKV-KPSKQDVRLTP 587 K++I++ + L AWK W+EE + G +PPGN G T W R V + +K ++RLT Sbjct: 105 IKYNIVDDASREGLTAAWKSWVEETVAEAGIIPPGNAPGETKWQSRSVARATKPEIRLTA 164
Query: 588 G 590 G Sbjct: 165 G 165
>tr|A3CFF5|A3CFF5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034027 PE=4 SV=1 Length = 285
Score = 110 bits (275), Expect = 7e-23 Identities = 51/118 (43%), Positives = 75/118 (63%), Gaps = 3/118 (2%) Frame = +3
Query: 270 DLSKVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVHDLP-ELCASTKFSIIN--APE 440 D +P G+Y +YD AG+LQ++G++R + +S++ H +P +LC S K SI + P+ Sbjct: 68 DEEALPPKPGVYGVYDPAGELQFVGISRNVRASVEGHRRKVPADLCGSVKVSIADEETPD 127
Query: 441 KAALLDAWKQWMEEHINVTGKVPPGNVQGVTTWTERKVKPSKQDVRLTPGTNTKLNIP 614 + L +AWK W+EEHI TGK PPGNV G TW +P D+RLTPG + +L +P Sbjct: 128 RTVLTNAWKSWLEEHITATGKAPPGNVAGNHTWVGPPQRP--PDLRLTPGRHVQLTVP 183
>tr|A2ZIK9|A2ZIK9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37657 PE=4 SV=1 Length = 285
Score = 110 bits (275), Expect = 7e-23 Identities = 51/118 (43%), Positives = 75/118 (63%), Gaps = 3/118 (2%) Frame = +3
Query: 270 DLSKVPASSGIYAIYDKAGDLQYIGLTRRLSSSLQNHVHDLP-ELCASTKFSIIN--APE 440 D +P G+Y +YD AG+LQ++G++R + +S++ H +P +LC S K SI + P+ Sbjct: 68 DEEALPPKPGVYGVYDPAGELQFVGISRNVRASVEGHRRKVPADLCGSVKVSIADEETPD 127
Query: 441 KAALLDAWKQWMEEHINVTGKVPPGNVQGVTTWTERKVKPSKQDVRLTPGTNTKLNIP 614 + L +AWK W+EEHI TGK PPGNV G TW +P D+RLTPG + +L +P Sbjct: 128 RTVLTNAWKSWLEEHITATGKAPPGNVAGNHTWVGPPQRP--PDLRLTPGRHVQLTVP 183
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