DK945317
Clone id YMU02A01NGRL0008_O19
Library
Length 240
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0008_O19. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
CAGTAGGCCCTGGCGGTTCTTCACAGTGCAGTCTTGACCGGTTGGCCAACGATATCTCCG
GCAAACGATCTACTATTTCATGATTTTGCTGTAGGATTAATGGCGATAAGGAGATCATGT
TGTTCTGCACGCTCTCTAATTTTATTTGATGTCAGGAGAGACCTGGTATGGACATAGGAG
TTTCCNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5B8L2
Definition sp|Q5B8L2|MUS81_EMENI Crossover junction endonuclease mus81 OS=Emericella nidulans
Align length 42
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945317|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_O19, 5'
(186 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5B8L2|MUS81_EMENI Crossover junction endonuclease mus81 OS=E... 32 1.3
sp|A4D1E1|Z804B_HUMAN Zinc finger protein 804B OS=Homo sapiens G... 30 4.8

>sp|Q5B8L2|MUS81_EMENI Crossover junction endonuclease mus81
OS=Emericella nidulans GN=mus81 PE=3 SV=1
Length = 677

Score = 31.6 bits (70), Expect = 1.3
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2

Query: 149 SNKIRERAEQHDLLIAINP-TAKS*NSRSFAGDIVGQPVKTA 27
+NK++E ++H L + +P TAK+ +S GD GQP K A
Sbjct: 147 TNKLKEYCKEHGLPMPEDPRTAKADKRKSTDGDTEGQPAKKA 188


>sp|A4D1E1|Z804B_HUMAN Zinc finger protein 804B OS=Homo sapiens
GN=ZNF804B PE=1 SV=1
Length = 1349

Score = 29.6 bits (65), Expect = 4.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = -3

Query: 139 LESVQNNMISLSPLILQQNHEIVDRLPEISLA-----NRSRLHCEE 17
LESV +N IS++ ILQ H+ +D E S+ ++S +H +
Sbjct: 288 LESVLHNTISINSKILQDKHDSIDETLEDSIGIHASFSKSNIHLSD 333


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945317|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0008_O19, 5'
(186 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******