DK945467
Clone id YMU02A01NGRL0009_G14
Library
Length 496
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_G14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
TCGCACCTTTCCCACTGCGGAAGCAAGCTATGGCGAAGATGGCGCGCGTAGCAGACGTTG
CGTACAAGTCAACCGCCATATTCCTTGGGGCATGCACCATTGTATTTGGAGCAAACCTTG
TGTACAACGTGTCCCGTGGCATCGCCTGGCATTTGAACAGTTCCTCTAAGCAAGCAGTCC
CAATGGAGCGGCCTAGTCCCAGTTCCCAATCTCCTTCAACCACTAAAAGTTGAGAAATAA
GCCCACTGGTTATGTGCTGGTGGTGTTATCAAAAGCTTACAAATTTCTGGAATTAGAAAA
GGACTCAGATTTGTATATTTTGGTATTGGTTGACATTTATGAAGTGGTCCAGCTTTCAGC
TGTCTAGTGGCTACCCCTGCAAATTGGGTTAAGGGGAGTTAAGCTATGGAAAGTAATGAG
ATGATTTGCATTGCANAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q74ZZ2
Definition sp|Q74ZZ2|SWF1_ASHGO Palmitoyltransferase SWF1 OS=Ashbya gossypii
Align length 29
Score (bit) 35.0
E-value 0.14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945467|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_G14, 5'
(436 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q74ZZ2|SWF1_ASHGO Palmitoyltransferase SWF1 OS=Ashbya gossypi... 35 0.14
sp|Q4PE27|PFA4_USTMA Palmitoyltransferase PFA4 OS=Ustilago maydi... 33 0.68
sp|Q8IZJ3|CPMD8_HUMAN C3 and PZP-like alpha-2-macroglobulin doma... 32 1.5
sp|Q6CJC5|SWF1_KLULA Palmitoyltransferase SWF1 OS=Kluyveromyces ... 31 2.0
sp|O14345|YB3F_SCHPO Uncharacterized protein C2F12.15c OS=Schizo... 31 2.6
sp|Q04629|SWF1_YEAST Palmitoyltransferase SWF1 OS=Saccharomyces ... 31 2.6
sp|Q58DT3|ZDHC4_BOVIN Probable palmitoyltransferase ZDHHC4 OS=Bo... 30 3.4
sp|Q6FXC6|SWF1_CANGA Palmitoyltransferase SWF1 OS=Candida glabra... 30 3.4
sp|P45651|SYGB_COXBU Glycyl-tRNA synthetase beta subunit OS=Coxi... 30 5.6
sp|A9NB99|SYGB_COXBR Glycyl-tRNA synthetase beta subunit OS=Coxi... 30 5.6
sp|A9KBT7|SYGB_COXBN Glycyl-tRNA synthetase beta subunit OS=Coxi... 30 5.6
sp|Q5BC23|SWF1_EMENI Palmitoyltransferase swf1 OS=Emericella nid... 30 5.7
sp|Q6L400|R1B16_SOLDE Putative late blight resistance protein ho... 29 7.3
sp|Q5XGE9|LIPH_XENTR Lipase member H OS=Xenopus tropicalis GN=li... 29 7.3
sp|Q6BP23|SWF1_DEBHA Palmitoyltransferase SWF1 OS=Debaryomyces h... 29 7.5
sp|Q6L406|R1B19_SOLDE Putative late blight resistance protein ho... 29 9.6
sp|Q8W1E0|R1A_SOLDE Late blight resistance protein R1-A OS=Solan... 29 9.6
sp|Q8MJJ2|LAMP3_MACMU Lysosome-associated membrane glycoprotein ... 29 9.6
sp|Q4WN54|SWF1_ASPFU Palmitoyltransferase swf1 OS=Aspergillus fu... 29 9.8

>sp|Q74ZZ2|SWF1_ASHGO Palmitoyltransferase SWF1 OS=Ashbya gossypii
GN=SWF1 PE=3 SV=1
Length = 326

Score = 35.0 bits (79), Expect = 0.14
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2

Query: 44 ARSRRCVQVNRHIPWGMHHCIWSKPCVQR 130
ARSR C R +P HHC+W CV R
Sbjct: 135 ARSRHCGVCGRCVPLADHHCVWLNNCVGR 163


>sp|Q4PE27|PFA4_USTMA Palmitoyltransferase PFA4 OS=Ustilago maydis
GN=PFA4 PE=3 SV=1
Length = 604

Score = 32.7 bits (73), Expect = 0.68
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1

Query: 52 QTLRTSQPPYSLGHAPLYLEQTLCTTCPVASPGI*TVPLSKQSQWSGLVPVPNLLQ 219
Q L P++LG +Y LC T S VP Q +WS L PV +L +
Sbjct: 107 QALAAVLVPFNLGLLAIYYNYWLCVTTDAGS-----VPAGWQPEWSALEPVASLAE 157


>sp|Q8IZJ3|CPMD8_HUMAN C3 and PZP-like alpha-2-macroglobulin
domain-containing protein 8 OS=Homo sapiens GN=CPAMD8
PE=1 SV=1
Length = 1885

Score = 31.6 bits (70), Expect = 1.5
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Frame = -3

Query: 332 QPIPKYTNLSPFLIPEICKLLITPPAH----NQWAYFSTFSG*RRLGTGTRP----LHWD 177
Q +P Y +L + P C L + PP+H + AYFS S T P L+++
Sbjct: 436 QYLPSYLSLGSWYSPSQCYLQLQPPSHPLQVGEEAYFSVKS--------TCPCNFTLYYE 487

Query: 176 CLLRGTVQMPGDATGHVVHK 117
RG + + G H +
Sbjct: 488 VAARGNIVLSGQQPAHTTQQ 507


>sp|Q6CJC5|SWF1_KLULA Palmitoyltransferase SWF1 OS=Kluyveromyces
lactis GN=SWF1 PE=3 SV=1
Length = 324

Score = 31.2 bits (69), Expect = 2.0
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2

Query: 47 RSRRCVQVNRHIPWGMHHCIWSKPCV 124
RS+ C R IP HHCIW CV
Sbjct: 139 RSKHCPICERCIPLHDHHCIWINNCV 164


>sp|O14345|YB3F_SCHPO Uncharacterized protein C2F12.15c
OS=Schizosaccharomyces pombe GN=SPBC2F12.15c PE=2 SV=1
Length = 329

Score = 30.8 bits (68), Expect = 2.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2

Query: 47 RSRRCVQVNRHIPWGMHHCIWSKPCV 124
RS C Q N+ I HHC+W K CV
Sbjct: 109 RSHHCSQCNKCILRMDHHCMWFKNCV 134


>sp|Q04629|SWF1_YEAST Palmitoyltransferase SWF1 OS=Saccharomyces
cerevisiae GN=SWF1 PE=1 SV=2
Length = 336

Score = 30.8 bits (68), Expect = 2.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2

Query: 44 ARSRRCVQVNRHIPWGMHHCIWSKPCV 124
ARS+ C NR + HHCIW C+
Sbjct: 145 ARSKHCSICNRCVLVADHHCIWINNCI 171


>sp|Q58DT3|ZDHC4_BOVIN Probable palmitoyltransferase ZDHHC4 OS=Bos
taurus GN=ZDHHC4 PE=2 SV=1
Length = 343

Score = 30.4 bits (67), Expect = 3.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2

Query: 44 ARSRRCVQVNRHIPWGMHHCIWSKPCVQRVPWHRLAFEQFL 166
ARS+ C NR + HHC+W C+ W+ F +L
Sbjct: 160 ARSKHCSVCNRCVHRFDHHCVWVNNCIG--AWNTRYFLSYL 198


>sp|Q6FXC6|SWF1_CANGA Palmitoyltransferase SWF1 OS=Candida glabrata
GN=SWF1 PE=3 SV=1
Length = 330

Score = 30.4 bits (67), Expect = 3.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2

Query: 44 ARSRRCVQVNRHIPWGMHHCIWSKPCV 124
ARS+ C N I HHC+W CV
Sbjct: 145 ARSKHCTVCNSCIYLADHHCVWINNCV 171


>sp|P45651|SYGB_COXBU Glycyl-tRNA synthetase beta subunit
OS=Coxiella burnetii GN=glyS PE=3 SV=2
Length = 689

Score = 29.6 bits (65), Expect = 5.6
Identities = 29/93 (31%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Frame = -3

Query: 386 QFAGVATRQLKAGPLHK-----C---QPIPKYTNLSPFLIPEICKLLITPPAHNQWAYFS 231
Q GV+T QLK K C QP +L P +I K L TP A +W
Sbjct: 96 QSCGVSTAQLKVKKTKKGEFIYCEIEQPGQNTLDLLPNIIQSALKQLPTPKAM-RWGDHK 154

Query: 230 TFSG*RRLGTGTRPLHWDCLLRGTVQMPGDATG 132
F RP+HW L+ G +P G
Sbjct: 155 EFF--------VRPVHWIILMLGKDLVPATLLG 179


>sp|A9NB99|SYGB_COXBR Glycyl-tRNA synthetase beta subunit
OS=Coxiella burnetii (strain RSA 331 / Henzerling II)
GN=glyS PE=3 SV=1
Length = 689

Score = 29.6 bits (65), Expect = 5.6
Identities = 29/93 (31%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Frame = -3

Query: 386 QFAGVATRQLKAGPLHK-----C---QPIPKYTNLSPFLIPEICKLLITPPAHNQWAYFS 231
Q GV+T QLK K C QP +L P +I K L TP A +W
Sbjct: 96 QSCGVSTAQLKVKKTKKGEFIYCEIEQPGQNTLDLLPNIIQSALKQLPTPKAM-RWGDHK 154

Query: 230 TFSG*RRLGTGTRPLHWDCLLRGTVQMPGDATG 132
F RP+HW L+ G +P G
Sbjct: 155 EFF--------VRPVHWIILMLGKDLVPATLLG 179


tr_hit_id A9SRY2
Definition tr|A9SRY2|A9SRY2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 49
Score (bit) 48.5
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945467|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_G14, 5'
(436 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SRY2|A9SRY2_PHYPA Predicted protein OS=Physcomitrella paten... 49 2e-04
tr|Q852C1|Q852C1_ORYSJ Os03g0824500 protein OS=Oryza sativa subs... 36 0.84
tr|Q10BB2|Q10BB2_ORYSJ Putative uncharacterized protein OS=Oryza... 36 0.84
tr|A2XNI9|A2XNI9_ORYSI Putative uncharacterized protein OS=Oryza... 36 0.84
tr|B6T132|B6T132_MAIZE Putative uncharacterized protein OS=Zea m... 36 1.1
tr|Q94F43|Q94F43_ARATH AT3g47831/T23J7 (Putative uncharacterized... 35 1.4
tr|A9NWG5|A9NWG5_PICSI Putative uncharacterized protein OS=Picea... 35 1.4
tr|A7PD92|A7PD92_VITVI Chromosome chr17 scaffold_12, whole genom... 33 5.4
tr|Q4RI07|Q4RI07_TETNG Chromosome 8 SCAF15044, whole genome shot... 33 7.1
tr|B4JXH6|B4JXH6_DROGR GH17958 OS=Drosophila grimshawi GN=GH1795... 33 9.2
tr|A8PMU6|A8PMU6_9COXI Enhanced entry protein EnhA OS=Rickettsie... 33 9.3

>tr|A9SRY2|A9SRY2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_134275 PE=4 SV=1
Length = 50

Score = 48.5 bits (114), Expect = 2e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3

Query: 39 MARVADVAYKSTAIFLGACTIVFGANLVYNVSRGIAWHLNSSSKQAVPM 185
MA+ ADVA++S LG T+ G NL++N++RGI+WH + P+
Sbjct: 1 MAKFADVAHRSVTAGLGLATLWVGGNLIFNITRGISWHYSQDKVLLFPL 49


>tr|Q852C1|Q852C1_ORYSJ Os03g0824500 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0081B07.2 PE=4 SV=1
Length = 50

Score = 36.2 bits (82), Expect = 0.84
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3

Query: 48 VADVAYKSTAIFLGACTIVFGANLVYNVSRGIAWHLNSS 164
VADVA+K+ LG T+ NV RG++WH S
Sbjct: 3 VADVAFKALTAGLGVATLYLAGTFSVNVYRGLSWHSEQS 41


>tr|Q10BB2|Q10BB2_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=LOC_Os03g60950 PE=4 SV=1
Length = 67

Score = 36.2 bits (82), Expect = 0.84
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3

Query: 48 VADVAYKSTAIFLGACTIVFGANLVYNVSRGIAWHLNSS 164
VADVA+K+ LG T+ NV RG++WH S
Sbjct: 3 VADVAFKALTAGLGVATLYLAGTFSVNVYRGLSWHSEQS 41


>tr|A2XNI9|A2XNI9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_14132 PE=4 SV=1
Length = 50

Score = 36.2 bits (82), Expect = 0.84
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3

Query: 48 VADVAYKSTAIFLGACTIVFGANLVYNVSRGIAWHLNSS 164
VADVA+K+ LG T+ NV RG++WH S
Sbjct: 3 VADVAFKALTAGLGVATLYLAGTFSVNVYRGLSWHSEQS 41


>tr|B6T132|B6T132_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 50

Score = 35.8 bits (81), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3

Query: 48 VADVAYKSTAIFLGACTIVFGANLVYNVSRGIAWHLNSSSKQAVPME 188
V D+A+K+ LG T+ A NV RG++WH S + E
Sbjct: 3 VGDLAFKALTAGLGVATLYLAATFSVNVYRGLSWHSEQSKLEKAKTE 49


>tr|Q94F43|Q94F43_ARATH AT3g47831/T23J7 (Putative uncharacterized
protein) OS=Arabidopsis thaliana PE=4 SV=1
Length = 57

Score = 35.4 bits (80), Expect = 1.4
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3

Query: 30 MAKMARVADVAYKSTAIFLGACTIVFGANLVYNVSRGIAWHLNSSSK 170
M + R D ++K+ LG TI A +NV RG++WH N+ SK
Sbjct: 1 MGIVTRAGDWSFKAFTAGLGLATIYLTATFSFNVYRGLSWH-NAQSK 46


>tr|A9NWG5|A9NWG5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 65

Score = 35.4 bits (80), Expect = 1.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3

Query: 39 MARVADVAYKSTAIFLGACTIVFGANLVYNVSRGIAWHLNSSSK 170
M + D+A+K+ LG +I G N N+ GI+WH N+ +K
Sbjct: 12 MGKAGDIAFKTFTGVLGVTSIYLGFNFAVNLYNGISWH-NAQTK 54


>tr|A7PD92|A7PD92_VITVI Chromosome chr17 scaffold_12, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016184001
PE=4 SV=1
Length = 91

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3

Query: 18 RKQAMAKMARVADVAYKSTAIFLGACTIVFGANLVYNVSRGIAWH 152
+++ M+ M + D A+K+ L T+ A NV RG AWH
Sbjct: 31 KRRNMSAMNKAGDWAFKALVGGLSVATVYLSATFSVNVYRGFAWH 75


>tr|Q4RI07|Q4RI07_TETNG Chromosome 8 SCAF15044, whole genome shotgun
sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00034091001 PE=4 SV=1
Length = 358

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -1

Query: 187 SIGTACLEELFKCQAM-PRDTLYTRFAPNTM 98
SI +CLEEL KCQ + PR+ L+T F TM
Sbjct: 231 SIYLSCLEELMKCQVIYPREQLFTIFELETM 261


>tr|B4JXH6|B4JXH6_DROGR GH17958 OS=Drosophila grimshawi GN=GH17958
PE=4 SV=1
Length = 987

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1

Query: 259 QHITSGLISQLLVVEGDWELGLGRSIGTACLEELFKCQAMPRDT-LYTRFAPNTMVHAPR 83
+H ++Q + D++ +G+ + + C E + RD LY ++AP MV PR
Sbjct: 575 EHADPHSLAQFAISINDYDEVIGQQLKSDCFAEALQTLCRQRDLQLYYKYAPQLMVRLPR 634

Query: 82 NMAVDLYATSA 50
L A A
Sbjct: 635 QTIDALIALDA 645