DK945489
Clone id YMU02A01NGRL0009_H20
Library
Length 328
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0009_H20. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GCACTTGCAGAGTTTGTCAGGCTTCAAGCAGATCAGGGATGGAAGAACTCACAGTAAATT
GAAAATTTTGAGGGCTTCAATGTGCCAACCATTGATTTCAATAGTCTTTTTGCTGATATA
AACGAAGAAGTGAAAAAACTTTCCGATAAATCCGACGTTTTCACACGAGCGCACTAAAAT
TCGGAAGCACTATTTGATGGCTGTTTATTTTGTTATTCAAACAGATCAATAGAGCATCAC
GAAGTATGAAGAGGTATCCTCAAGCAGCAAATGAAGCCTTTTTTCATGGTTTTAGTCCAG
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9K8X7
Definition sp|Q9K8X7|COAA_BACHD Pantothenate kinase OS=Bacillus halodurans
Align length 29
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945489|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_H20, 5'
(300 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9K8X7|COAA_BACHD Pantothenate kinase OS=Bacillus halodurans ... 30 4.9

>sp|Q9K8X7|COAA_BACHD Pantothenate kinase OS=Bacillus halodurans
GN=coaA PE=3 SV=1
Length = 316

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1

Query: 150 FIGKFFHFFVYISKKTIEINGWHIEALKI 64
F+ FF F +Y+ K +I W+IE K+
Sbjct: 217 FVSDFFDFSIYVDAKEEQILQWYIERFKL 245


tr_hit_id A9S6N3
Definition tr|A9S6N3|A9S6N3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 14
Score (bit) 32.7
E-value 9.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK945489|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0009_H20, 5'
(300 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S6N3|A9S6N3_PHYPA Predicted protein (Fragment) OS=Physcomit... 33 9.1

>tr|A9S6N3|A9S6N3_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_124962 PE=4 SV=1
Length = 62

Score = 32.7 bits (73), Expect = 9.1
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1

Query: 1 ALAEFVRLQADQGW 42
ALAEFVRLQADQGW
Sbjct: 47 ALAEFVRLQADQGW 60