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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK945990
Clone id YMU02A01NGRL0011_B15
Library
Length 411
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0011_B15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGTATTTGTTATCGGATTCTCAATTGTCATTTTTGGAAACAAGATCTCCACACAGACTGC
CATAGGTACATCGATTGCCATAGCGGGTGTAGCAATCTACTCTTACATTAAGGCACAAAT
GGAAGAGGCCAAGAAGAAGGCACCTCCTCCCCTACCAGAAGACGCCAAAACCGCATGAAT
TGCCTTCTGGAGTGCTGCTGAGACATAGCCACTTTTGTTGTACATCATGTATTTGATTCT
TTTATCTTTTGGTGTGAAATGCAAATTGTTTGTCTTATCAAAAACTATTTCCAAAAAAAT
CCAGGTCAGAACAAGATGCTTGAATTCTCACCAATAAAAAACGCCCGGCGGAAACCAAAA
AATAAAAAAAAAAAAAAAATGGGGTGCCCCCCTCGCCCCTGGAAAAATTTT
■■Homology search results ■■ -
sp_hit_id P29463
Definition sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum
Align length 40
Score (bit) 71.2
E-value 1.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945990|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_B15, 5'
         (316 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chl...    71   1e-12
sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chl...    71   1e-12
sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chl...    71   2e-12
sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chlor...    70   2e-12
sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chl...    70   2e-12
sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chl...    70   3e-12
sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, ch...    68   2e-11
sp|Q5CZA4|S35E2_HUMAN Solute carrier family 35 member E2 OS=Homo...    36   0.052
sp|Q8C811|S35E2_MOUSE Solute carrier family 35 member E2 OS=Mus ...    35   0.088
sp|P52178|TPT2_BRAOB Triose phosphate/phosphate translocator, no...    35   0.12 
sp|Q9VR50|S35E1_DROME Solute carrier family 35 member E1 homolog...    33   0.34 
sp|A2VEC9|SSPO_HUMAN SCO-spondin OS=Homo sapiens GN=SSPO PE=2 SV=1     31   2.2  
sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator ...    30   3.7  
sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator ...    30   3.7  
sp|Q550W6|FUCT1_DICDI GDP-fucose transporter 1 OS=Dictyostelium ...    29   6.3  

>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator,
           chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1
          Length = 414

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSIVIFGNKISTQT IGT IAIAGVAIYS+IKA+M
Sbjct: 365 VFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIKAKM 404


>sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator,
           chloroplastic OS=Zea mays GN=TPT PE=1 SV=1
          Length = 409

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI++FGNKISTQT IGTSIAIAGVA+YSYIKA++
Sbjct: 361 VFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIKAKI 400


>sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator,
           chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1
          Length = 407

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI++FGNKISTQTAIGTSIAIAGVAIYS IKA++
Sbjct: 358 VFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIKARI 397


>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator,
           chloroplastic OS=Pisum sativum PE=1 SV=1
          Length = 402

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI+IFGNKISTQT IGT IAIAGVA+YS+IKAQ+
Sbjct: 353 VFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIKAQI 392


>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator,
           chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1
          Length = 408

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI++FGNKISTQTAIGTSIAIAGVA+YS IKA++
Sbjct: 359 VFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIKAKI 398


>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator,
           chloroplastic OS=Spinacia oleracea PE=1 SV=1
          Length = 404

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI+ FGNKISTQTAIGTSIAIAGVA+YS IKA+M
Sbjct: 355 VFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIKAKM 394


>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator,
           chloroplastic OS=Brassica oleracea var. botrytis GN=TPT
           PE=2 SV=1
          Length = 407

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSIVIFGNKISTQT IGT IAIAGVA+YS IKA++
Sbjct: 358 VFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIKAKI 397


>sp|Q5CZA4|S35E2_HUMAN Solute carrier family 35 member E2 OS=Homo
           sapiens GN=SLC35E2 PE=2 SV=2
          Length = 405

 Score = 36.2 bits (82), Expect = 0.052
 Identities = 13/31 (41%), Positives = 24/31 (77%)
 Frame = +2

Query: 11  IGFSIVIFGNKISTQTAIGTSIAIAGVAIYS 103
           I  S+++FGNKI++ +A+GT++   GV +Y+
Sbjct: 338 IWLSVIVFGNKITSLSAVGTALVTVGVLLYN 368


>sp|Q8C811|S35E2_MOUSE Solute carrier family 35 member E2 OS=Mus
           musculus GN=Slc35e2 PE=2 SV=1
          Length = 405

 Score = 35.4 bits (80), Expect = 0.088
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = +2

Query: 11  IGFSIVIFGNKISTQTAIGTSIAIAGVAIYS 103
           I  SI++FGNKI++ +AIGT +   GV +Y+
Sbjct: 338 IWLSIIVFGNKITSLSAIGTILVTLGVLLYN 368


>sp|P52178|TPT2_BRAOB Triose phosphate/phosphate translocator,
           non-green plastid, chloroplastic OS=Brassica oleracea
           var. botrytis GN=NGTPT PE=2 SV=1
          Length = 402

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIK 112
           V VI  S++ F   +S   A GT IA+AGV +YS +K
Sbjct: 357 VVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYSRVK 393
tr_hit_id Q9SPH6
Definition tr|Q9SPH6|Q9SPH6_BETVU Phophate translocator (Fragment) OS=Beta vulgaris subsp. vulgaris
Align length 40
Score (bit) 74.3
E-value 3.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK945990|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0011_B15, 5'
         (316 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SPH6|Q9SPH6_BETVU Phophate translocator (Fragment) OS=Beta ...    74   3e-12
tr|A9NVP1|A9NVP1_PICSI Putative uncharacterized protein OS=Picea...    73   6e-12
tr|Q9MSB6|Q9MSB6_MESCR Triose phosphate/phosphate translocator O...    73   8e-12
tr|B4G0N7|B4G0N7_MAIZE Putative uncharacterized protein OS=Zea m...    71   2e-11
tr|Q58J26|Q58J26_SOYBN Putative plastid triose phophate transloc...    70   4e-11
tr|Q40568|Q40568_TOBAC Phosphate translocator OS=Nicotiana tabac...    70   7e-11
tr|Q9ARH5|Q9ARH5_ORYSA Triose phosphate/phosphate translocator O...    69   1e-10
tr|Q9ATY2|Q9ATY2_WHEAT Triose phosphate translocator OS=Triticum...    69   2e-10
tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate trans...    68   2e-10
tr|B8ABD8|B8ABD8_ORYSI Putative uncharacterized protein OS=Oryza...    68   2e-10
tr|B8ABD6|B8ABD6_ORYSI Putative uncharacterized protein OS=Oryza...    68   2e-10
tr|A7QPR8|A7QPR8_VITVI Chromosome chr10 scaffold_138, whole geno...    68   2e-10
tr|A5B912|A5B912_VITVI Putative uncharacterized protein OS=Vitis...    68   2e-10
tr|A2ZR52|A2ZR52_ORYSJ Putative uncharacterized protein OS=Oryza...    68   2e-10
tr|Q9ZSR7|Q9ZSR7_ARATH Phosphate/triose-phosphate translocator (...    67   3e-10
tr|Q9FNL1|Q9FNL1_ARATH Phosphate/triose-phosphate translocator O...    67   3e-10
tr|Q8LB04|Q8LB04_ARATH Phosphate/triose-phosphate translocator O...    67   3e-10
tr|Q56WK8|Q56WK8_ARATH Phosphate/triose-phosphate translocator (...    67   3e-10
tr|Q2V313|Q2V313_ARATH Uncharacterized protein At5g46110.3 OS=Ar...    67   3e-10
tr|A9U2X6|A9U2X6_PHYPA Predicted protein OS=Physcomitrella paten...    67   3e-10
tr|A9U2X2|A9U2X2_PHYPA Predicted protein OS=Physcomitrella paten...    67   3e-10
tr|Q60EU8|Q60EU8_ORYSJ Os05g0241200 protein OS=Oryza sativa subs...    67   4e-10
tr|A3B1R0|A3B1R0_ORYSJ Putative uncharacterized protein OS=Oryza...    67   4e-10
tr|A2Y286|A2Y286_ORYSI Putative uncharacterized protein OS=Oryza...    67   4e-10
tr|A7P2G6|A7P2G6_VITVI Chromosome chr1 scaffold_5, whole genome ...    66   8e-10
tr|B6T5Y2|B6T5Y2_MAIZE Triose phosphate/phosphate translocator O...    66   1e-09
tr|B4FWC0|B4FWC0_MAIZE Putative uncharacterized protein OS=Zea m...    66   1e-09
tr|B4FCM2|B4FCM2_MAIZE Putative uncharacterized protein OS=Zea m...    66   1e-09
tr|A7P2G5|A7P2G5_VITVI Chromosome chr1 scaffold_5, whole genome ...    57   6e-07
tr|Q00V27|Q00V27_OSTTA TPT_FLAPR Triose phosphate/phosphate tran...    55   2e-06

>tr|Q9SPH6|Q9SPH6_BETVU Phophate translocator (Fragment) OS=Beta
           vulgaris subsp. vulgaris PE=2 SV=1
          Length = 277

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 37/40 (92%), Positives = 40/40 (100%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI+IFGNKISTQTAIGTSIAIAGVAIYS+IKA+M
Sbjct: 235 VFVIGFSIIIFGNKISTQTAIGTSIAIAGVAIYSFIKAKM 274


>tr|A9NVP1|A9NVP1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 443

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 35/40 (87%), Positives = 40/40 (100%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI++FGN+ISTQTAIGTSIAIAGVAIYS+IKAQ+
Sbjct: 389 VFVIGFSIIVFGNRISTQTAIGTSIAIAGVAIYSFIKAQL 428


>tr|Q9MSB6|Q9MSB6_MESCR Triose phosphate/phosphate translocator
           OS=Mesembryanthemum crystallinum GN=TPT PE=2 SV=1
          Length = 404

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI+IFGNKISTQTAIGTSIAIAGVAIYS+IK +M
Sbjct: 355 VFVIGFSIIIFGNKISTQTAIGTSIAIAGVAIYSFIKGKM 394


>tr|B4G0N7|B4G0N7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 296

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI++FGNKISTQT IGTSIAIAGVA+YSYIKA++
Sbjct: 248 VFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIKAKI 287


>tr|Q58J26|Q58J26_SOYBN Putative plastid triose phophate
           translocator (Fragment) OS=Glycine max PE=2 SV=1
          Length = 266

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI++FGNKISTQT IGT+IAIAGVA+YS+IKA+M
Sbjct: 205 VFVIGFSIIVFGNKISTQTGIGTAIAIAGVALYSFIKARM 244


>tr|Q40568|Q40568_TOBAC Phosphate translocator OS=Nicotiana tabacum
           PE=2 SV=1
          Length = 401

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI++FGNKISTQT IGT IAIAGVA+YS+IKA+M
Sbjct: 352 VFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSFIKAKM 391


>tr|Q9ARH5|Q9ARH5_ORYSA Triose phosphate/phosphate translocator
           OS=Oryza sativa PE=2 SV=1
          Length = 417

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI+IFGNKI+TQT IGT IAIAGVA+YSYIKA++
Sbjct: 369 VFVIGFSIIIFGNKITTQTGIGTCIAIAGVALYSYIKAKI 408


>tr|Q9ATY2|Q9ATY2_WHEAT Triose phosphate translocator OS=Triticum
           aestivum GN=tpt1 PE=2 SV=1
          Length = 402

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI+IFGNKI+TQT IGT +AIAGVA+YSYIKA++
Sbjct: 354 VFVIGFSIIIFGNKITTQTGIGTCVAIAGVALYSYIKAKI 393


>tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate
           translocator (Os01g0239200 protein) OS=Oryza sativa
           subsp. japonica GN=OSJNBa0086P08.33 PE=4 SV=1
          Length = 417

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI++FGN+I+TQT IGT IAIAGVAIYSYIKA++
Sbjct: 369 VFVIGFSIIVFGNRITTQTGIGTCIAIAGVAIYSYIKAKI 408


>tr|B8ABD8|B8ABD8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_01091 PE=4 SV=1
          Length = 348

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +2

Query: 2   VFVIGFSIVIFGNKISTQTAIGTSIAIAGVAIYSYIKAQM 121
           VFVIGFSI++FGN+I+TQT IGT IAIAGVAIYSYIKA++
Sbjct: 300 VFVIGFSIIVFGNRITTQTGIGTCIAIAGVAIYSYIKAKI 339