DK948045
Clone id TST38A01NGRL0002_E09
Library
Length 673
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_E09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CACACACATTGCTCCGTCGTCCCTTTAGCATGGCTGCTTCTTCTTCATGAGAAAGCCAGT
ACCCATCTCACCATCGCACCCCTTTCAGGCCACATACTGTGACTGCTCTTTCCTGCCATA
GATAGGCAGGTGAAGAAGAGACCCCCTCCAGCGCCAGGAGAAGGTGACAAGATGTCATCT
GGTAAAGAAGGAAAAGAGGGAAAGGAGGGAGCTGCAGCCAAAGTTGCTGGTGCAGCAGTG
GCAGTTGGAGTTGCATGGGGCATTTTCAGATTTGTGAAGGCGAAAAAAGAAGAGGACGCC
CTCATTCAAGAGTATTATGGAGATCGAGAGGATTTTACTCTTCCTGATGGAGACCGTAAC
GATTATGATGCAGAGGAGGTCTACATTGAAGAGCAAGTTGAGTTTGTGAAGGTGGACCCT
CCTCCTCCCCCTCCTCCTATGGTTATTCCTCCTCATTCAGATGAGCTGAAAAGTGTACCA
GAGGAGGAAATCAAAGCAACAGAAAAAGTGGAACCTCCTCCACCTGAGCCAGAGGCTGAT
GAGAAGCCCAAGGTCGAGGAAAAGCCCTGGTTCCTTCGCCTTTTTGATCCACCCAAGAAA
ACTGATTGCAAGCCCAAGCTGAAGGAGAGTGAGAGCTTTGATAGTAGAGATCTGAAGCCC
AAAGAAAGTTATG
■■Homology search results ■■ -
sp_hit_id Q02614
Definition sp|Q02614|S30BP_MOUSE SAP30-binding protein OS=Mus musculus
Align length 41
Score (bit) 31.2
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948045|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_E09, 5'
(673 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q02614|S30BP_MOUSE SAP30-binding protein OS=Mus musculus GN=S... 31 5.2
sp|Q3UEZ8|NTCP4_MOUSE Sodium/bile acid cotransporter 4 OS=Mus mu... 31 5.2
sp|O35066|KIF3C_MOUSE Kinesin-like protein KIF3C OS=Mus musculus... 30 8.9

>sp|Q02614|S30BP_MOUSE SAP30-binding protein OS=Mus musculus
GN=Sap30bp PE=2 SV=2
Length = 308

Score = 31.2 bits (69), Expect = 5.2
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1

Query: 280 AKKEEDALIQEYYGDREDFTLPDGDRNDYDAEEVYIEEQVE 402
A +E+ L+ + YG+ +DF+ P GD + Y+ EE +Q E
Sbjct: 34 ATEEKGGLVSDAYGE-DDFSRPGGDEDGYEEEEDENSKQSE 73


>sp|Q3UEZ8|NTCP4_MOUSE Sodium/bile acid cotransporter 4 OS=Mus
musculus GN=Slc10a4 PE=2 SV=1
Length = 437

Score = 31.2 bits (69), Expect = 5.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1

Query: 580 GEGTRAFPRPWASHQP 533
G+G+ AFPRPW H+P
Sbjct: 79 GQGSSAFPRPWIPHEP 94


>sp|O35066|KIF3C_MOUSE Kinesin-like protein KIF3C OS=Mus musculus
GN=Kif3c PE=2 SV=2
Length = 796

Score = 30.4 bits (67), Expect = 8.9
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2

Query: 146 LQRQEKVTRCHLVKKEKRERRELQPKLLVQQWQ-LELHGAFSDL*RRKKKRTPSFKSI 316
L+RQE + ++KR RE+Q ++LV+ + +EL G +S L + + +T K +
Sbjct: 543 LKRQE-------IAEQKRREREMQQEMLVRDEETMELRGTYSSLQQEVEVKTKKLKKL 593


tr_hit_id B6KSR7
Definition tr|B6KSR7|B6KSR7_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 77
Score (bit) 34.7
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948045|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_E09, 5'
(673 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6KSR7|B6KSR7_TOXGO Putative uncharacterized protein OS=Toxop... 35 5.6

>tr|B6KSR7|B6KSR7_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_015710 PE=4 SV=1
Length = 874

Score = 34.7 bits (78), Expect = 5.6
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +1

Query: 283 KKEEDALIQEYYGDREDFTLPDGDRNDYDAEEVYIEEQVEFVK--------VDXXXXXXX 438
+KEEDA + + DRED L D D D +++ +++ EF++ VD
Sbjct: 726 EKEEDAEVDDLEEDREDDFLEDEKEEDADVDDLEEDKEDEFLEDETAEDKVVDDLDDEKE 785

Query: 439 XXXXXHSDELKSVPEEE 489
S+E++ + EEE
Sbjct: 786 DCFVEESEEVEDLAEEE 802