DK948066 |
Clone id |
TST38A01NGRL0002_F07 |
Library |
TST38 |
Length |
670 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_F07. 5' end sequence. |
Accession |
DK948066 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL198Contig1 |
Sequence |
GCCCTTTTTACTTCACTCACCATCCCCTTCTGGTCATCACGTGCGCGGGGAGCTCTATCA AGTCGACTCGTTGGCCATATCCAGACTTGATGAGCTCGAGGGTGTTGGTAAAGGTCATTA TGAGCGCTGCCCAATTTATGTTCGGATAATCTCCCCATTGCTTGATGCTGATACCCATCC AAGGAATGGGGTTGCAGAAACTGATATGGAAACAAATCAGAATGATGTGGATCAAAGTAA TGGGGCTATGGATGATGCGGCATCATGCTGCACTCTTGCGGGGCCCTTATCATCTTGTAG AATGTACATGGAACCTCCTGAACCTGATGAAATAGACTCAATGTCGTCTTCTAATGAGGT TTCTGGGTACATGCCTGCTGAAGCTTATTTTGCCTGTGCTGATTATGGGCTTCGCATGGC AGATCGTGCTCCTCACATTCCCTGCTACACTGAAAAGGAAGCCTTGACATATGTTCGCAG AAAAGATCGCCCTCATAATCGGACTTTTTTAGAGCATGTTCATGCTTGGATAGAGAAGCA GGGCCTCACTTACTCATGAAATCAGTAATTGTGCAAGCCTTTTTGAAGGTTTCACAAATT GTATGACAGCATGACATTGTAGTCTGCATCTCANTTGGCATAAAGTCTGCTTTGAGAGTA AGAGCTGGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M8T3 |
Definition |
sp|Q9M8T3|U131_ARATH UPF0131 protein At3g02910 OS=Arabidopsis thaliana |
Align length |
179 |
Score (bit) |
73.6 |
E-value |
9.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TZP6 |
Definition |
tr|A9TZP6|A9TZP6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
180 |
Score (bit) |
107.0 |
E-value |
5.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948066|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_F07, 5' (670 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TZP6|A9TZP6_PHYPA Predicted protein OS=Physcomitrella paten... 107 5e-22 tr|A9RS78|A9RS78_PHYPA Predicted protein OS=Physcomitrella paten... 76 2e-12 tr|Q8VZJ3|Q8VZJ3_ARATH AT3g02910/F13E7_14 OS=Arabidopsis thalian... 74 1e-11 tr|Q8LCA5|Q8LCA5_ARATH Putative uncharacterized protein OS=Arabi... 73 1e-11 tr|A9TW35|A9TW35_PHYPA Predicted protein OS=Physcomitrella paten... 64 7e-09 tr|A9T3K6|A9T3K6_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08 tr|Q84T74|Q84T74_ORYSJ Os03g0854000 protein OS=Oryza sativa subs... 60 2e-07 tr|A2XP74|A2XP74_ORYSI Putative uncharacterized protein OS=Oryza... 60 2e-07 tr|Q9FIQ3|Q9FIQ3_ARATH Genomic DNA, chromosome 5, P1 clone:MZA15... 53 2e-05 tr|B8LP51|B8LP51_PICSI Putative uncharacterized protein OS=Picea... 51 6e-05 tr|A9NNC2|A9NNC2_PICSI Putative uncharacterized protein OS=Picea... 51 8e-05 tr|A7PB69|A7PB69_VITVI Chromosome chr16 scaffold_10, whole genom... 44 0.007 tr|B6TL17|B6TL17_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.035 tr|Q2RAS4|Q2RAS4_ORYSJ Os11g0139900 protein OS=Oryza sativa subs... 40 0.13 tr|A3C8G6|A3C8G6_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.13 tr|A2ZB92|A2ZB92_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.13 tr|B5XEV0|B5XEV0_SALSA Troponin C-akin-1 protein OS=Salmo salar ... 40 0.17 tr|Q292M5|Q292M5_DROPS GA15469 OS=Drosophila pseudoobscura pseud... 39 0.23 tr|B4GD28|B4GD28_DROPE GL10896 OS=Drosophila persimilis GN=GL108... 38 0.50 tr|A4SPC6|A4SPC6_AERS4 Cyanate transport protein CynX OS=Aeromon... 38 0.65 tr|A4RXU2|A4RXU2_OSTLU Predicted protein OS=Ostreococcus lucimar... 37 0.86 tr|B4KQR9|B4KQR9_DROMO GI19135 OS=Drosophila mojavensis GN=GI191... 37 0.86 tr|A7CUR7|A7CUR7_9BACT Putative uncharacterized protein OS=Opitu... 37 1.1 tr|B4QD45|B4QD45_DROSI GD24907 OS=Drosophila simulans GN=GD24907... 37 1.1 tr|B4PBX6|B4PBX6_DROYA GE11400 OS=Drosophila yakuba GN=GE11400 P... 37 1.1 tr|B4IHB0|B4IHB0_DROSE GM11777 OS=Drosophila sechellia GN=GM1177... 37 1.1 tr|B3NR79|B3NR79_DROER GG19876 OS=Drosophila erecta GN=GG19876 P... 37 1.1 tr|B4LL23|B4LL23_DROVI GJ22268 OS=Drosophila virilis GN=GJ22268 ... 37 1.5 tr|A0KIR4|A0KIR4_AERHH Cyanate transport protein CynX OS=Aeromon... 36 1.9 tr|B4MJX3|B4MJX3_DROWI GK20731 OS=Drosophila willistoni GN=GK207... 36 1.9
>tr|A9TZP6|A9TZP6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_153180 PE=4 SV=1 Length = 175
Score = 107 bits (268), Expect = 5e-22 Identities = 73/180 (40%), Positives = 92/180 (51%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHP 181 PFL+ PS GHHVRGELY+VD +AI RLDELEGV KG+Y R PI ++S L Sbjct: 51 PFLIDIPS-LGHHVRGELYEVDRIAIERLDELEGVSKGNYVRRPI---VLSAL------- 99
Query: 182 RNGVAETDMETNQNDVDQSNGAMDDAASCCTLAGPLSSCRMYMEPPEPDEIDSMSSSNEV 361 Q+ V+Q +S+SS Sbjct: 100 ----------QLQSSVEQ---------------------------------ESLSSE--- 113
Query: 362 SGYMPAEAYFACADYGLRMADRAPHIPCYTEKEALTYVRRKDRPHNRTFLEHVHAWIEKQ 541 + A+AYFA Y ++A +APHI +TEKE TYVRRKDRP NRTFL+H+ WI+ Q Sbjct: 114 ---IIAQAYFAAPSYASKIA-KAPHIEAFTEKEYATYVRRKDRPQNRTFLQHIEHWIKTQ 169
>tr|A9RS78|A9RS78_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_118675 PE=4 SV=1 Length = 182
Score = 76.3 bits (186), Expect = 2e-12 Identities = 58/181 (32%), Positives = 77/181 (42%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHP 181 PFLL+ PS SG V+GELY VD A+ LDELEGV KGHYER P+ + Sbjct: 58 PFLLNIPS-SGLQVKGELYAVDQTALELLDELEGVSKGHYERRPLVL------------- 103
Query: 182 RNGVAETDMETNQNDVDQSNGAMDDAASCCTLAGPLSSCRMYMEPPEPDEIDSMSSSNEV 361 T++++ + D ++ + +A Y P +SS+ + Sbjct: 104 ------TNLQSLEYDCKPNSEILAEA---------------YFAHPSLQR--GLSSAPHI 140
Query: 362 SGYMPAEAYFACADYGLRMADRAPHIPCYTEKEALTYVRRKDRPHNRTFLEHVHAWIEKQ 541 Y E TYV RKDRP NRTFLEHV+ WI+ Sbjct: 141 EAYTKRE--------------------------TATYVYRKDRPKNRTFLEHVNNWIDSH 174
Query: 542 G 544 G Sbjct: 175 G 175
>tr|Q8VZJ3|Q8VZJ3_ARATH AT3g02910/F13E7_14 OS=Arabidopsis thaliana GN=At3g02910 PE=2 SV=1 Length = 187
Score = 73.6 bits (179), Expect = 1e-11 Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 2/179 (1%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHP 181 PFLL+ P SG+HV GELY V +SRLDELEG+ +GHY R PI + Sbjct: 61 PFLLNKPG-SGYHVNGELYAVSPRGLSRLDELEGISRGHYIRQPIRL------------- 106
Query: 182 RNGVAETDMETNQNDVDQSNGAMDDAASCCTLAGPLSSCRMYMEPPEPDEIDSMSSSNEV 361 A + E + D++ +A S C + Sbjct: 107 ---AAAEEEEEEEGDLE------TEAPSSCVV---------------------------- 129
Query: 362 SGYMPAEAYFACADY--GLRMADRAPHIPCYTEKEALTYVRRKDRPHNRTFLEHVHAWI 532 EAY+A Y L +R YTE EA YV+R DRP + +FL+H+ ++ Sbjct: 130 ------EAYYAHKSYEEELWRRNRGRSFGAYTENEARGYVKRNDRPQHLSFLDHIRIFV 182
>tr|Q8LCA5|Q8LCA5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 187
Score = 73.2 bits (178), Expect = 1e-11 Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 2/179 (1%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHP 181 PFLL+ P SG+HV GELY V +SRLDELEG+ +GHY R PI + Sbjct: 61 PFLLNKPG-SGYHVTGELYAVSPRGLSRLDELEGISRGHYIRQPIRL------------- 106
Query: 182 RNGVAETDMETNQNDVDQSNGAMDDAASCCTLAGPLSSCRMYMEPPEPDEIDSMSSSNEV 361 A + E + D++ +A S C + Sbjct: 107 ---AAAEEEEEEEGDLE------TEAPSSCVV---------------------------- 129
Query: 362 SGYMPAEAYFACADY--GLRMADRAPHIPCYTEKEALTYVRRKDRPHNRTFLEHVHAWI 532 EAY+A Y L +R YTE EA YV+R DRP + +FL+H+ ++ Sbjct: 130 ------EAYYAHKSYEEELWKRNRGRSFGAYTENEARGYVKRNDRPQHLSFLDHIRIFV 182
>tr|A9TW35|A9TW35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_151633 PE=4 SV=1 Length = 181
Score = 64.3 bits (155), Expect = 7e-09 Identities = 33/56 (58%), Positives = 37/56 (66%) Frame = +2
Query: 377 AEAYFACADYGLRMADRAPHIPCYTEKEALTYVRRKDRPHNRTFLEHVHAWIEKQG 544 AEAYFA R APHI YT++E YV RKDRP NRTFLEHV+ WI+ QG Sbjct: 120 AEAYFADPTLQ-RGLSSAPHIKAYTKRETENYVYRKDRPKNRTFLEHVNNWIDSQG 174
Score = 56.2 bits (134), Expect = 2e-06 Identities = 33/66 (50%), Positives = 39/66 (59%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHP 181 PFLLH P+ SG V+GELY VD A+ LDELEG KGHY R P+ + + L D P Sbjct: 58 PFLLHMPN-SGLQVKGELYAVDQSALELLDELEGTTKGHYVRRPLVLTGLQS-LQVDHAP 115
Query: 182 RNGVAE 199 AE Sbjct: 116 TEVFAE 121
>tr|A9T3K6|A9T3K6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_139735 PE=4 SV=1 Length = 182
Score = 62.0 bits (149), Expect = 3e-08 Identities = 37/76 (48%), Positives = 47/76 (61%) Frame = +2
Query: 329 EIDSMSSSNEVSGYMPAEAYFACADYGLRMADRAPHIPCYTEKEALTYVRRKDRPHNRTF 508 E+D SS +S EAYFA L ++ RAPH+ YT+KE + YV R+DRP +RTF Sbjct: 110 EVDCAPSSEVLS-----EAYFAHLALQLGLS-RAPHLEAYTKKETVNYVYREDRPKDRTF 163
Query: 509 LEHVHAWIEKQGLTYS 556 LEHV+ IE GL S Sbjct: 164 LEHVNHLIECHGLVPS 179
Score = 54.7 bits (130), Expect = 5e-06 Identities = 30/64 (46%), Positives = 40/64 (62%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHP 181 PFLLH P+ SGH V+GE+Y +D LA+ LD LE V KGH R P+ + + L+ D P Sbjct: 58 PFLLHMPN-SGHQVKGEVYALDQLAVELLDNLERVSKGHCMRRPLVLTGLRS-LEVDCAP 115
Query: 182 RNGV 193 + V Sbjct: 116 SSEV 119
>tr|Q84T74|Q84T74_ORYSJ Os03g0854000 protein OS=Oryza sativa subsp. japonica GN=Os03g0854000 PE=2 SV=1 Length = 188
Score = 59.7 bits (143), Expect = 2e-07 Identities = 52/180 (28%), Positives = 67/180 (37%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHP 181 PFLL+ P +GH V GELY V + RLDELEGV + HYER PI V + Sbjct: 75 PFLLNLPG-AGHRVSGELYAVTPRGLDRLDELEGVSRAHYERLPISVLL----------- 122
Query: 182 RNGVAETDMETNQNDVDQSNGAMDDAASCCTLAGPLSSCRMYMEPPEPDEIDSMSSSNEV 361 + GA DA + Y D++ + S Sbjct: 123 ------------------AEGAQVDAVA------------YYAHRGYADDLWARSGKKGY 152
Query: 362 SGYMPAEAYFACADYGLRMADRAPHIPCYTEKEALTYVRRKDRPHNRTFLEHVHAWIEKQ 541 Y PA +AD Y+RRKDRP TFLE + ++ Q Sbjct: 153 PEYSPA------------VAD--------------GYIRRKDRPQQLTFLEQIRVFVSSQ 186
>tr|A2XP74|A2XP74_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14378 PE=4 SV=1 Length = 188
Score = 59.7 bits (143), Expect = 2e-07 Identities = 52/180 (28%), Positives = 67/180 (37%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHP 181 PFLL+ P +GH V GELY V + RLDELEGV + HYER PI V + Sbjct: 75 PFLLNLPG-AGHRVSGELYAVTPRGLDRLDELEGVSRAHYERLPISVLL----------- 122
Query: 182 RNGVAETDMETNQNDVDQSNGAMDDAASCCTLAGPLSSCRMYMEPPEPDEIDSMSSSNEV 361 + GA DA + Y D++ + S Sbjct: 123 ------------------AEGAQVDAVA------------YYAHRGYADDLWARSGKKGY 152
Query: 362 SGYMPAEAYFACADYGLRMADRAPHIPCYTEKEALTYVRRKDRPHNRTFLEHVHAWIEKQ 541 Y PA +AD Y+RRKDRP TFLE + ++ Q Sbjct: 153 PEYSPA------------VAD--------------GYIRRKDRPQQLTFLEQIRVFVSSQ 186
>tr|Q9FIQ3|Q9FIQ3_ARATH Genomic DNA, chromosome 5, P1 clone:MZA15 (Putative uncharacterized protein At5g46720) OS=Arabidopsis thaliana GN=At5g46720 PE=2 SV=1 Length = 175
Score = 52.8 bits (125), Expect = 2e-05 Identities = 48/179 (26%), Positives = 70/179 (39%), Gaps = 2/179 (1%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRIISPLLDADTHP 181 P+L++ S SG +RGELY V + RLDELEG+ HYER PI V Sbjct: 56 PYLINK-SGSGQKIRGELYSVSKRGLVRLDELEGIKVNHYERLPIEV------------- 101
Query: 182 RNGVAETDMETNQNDVDQSNGAMDDAASCCTLAGPLSSCRMYMEPPEPDEIDSMSSSNEV 361 + E D E ++SNG Sbjct: 102 ---IEEDDEE------EESNGV-------------------------------------- 114
Query: 362 SGYMPAEAYFACADYGLRMADRAPHIPC--YTEKEALTYVRRKDRPHNRTFLEHVHAWI 532 + AEAYFA +G R+ ++ + E + + YVR KDRP + L+ + ++ Sbjct: 115 ---VLAEAYFAHFGFGERLWEKKGKCGMCEFGENDGVLYVRPKDRPMFSSVLDEIETFV 170
>tr|B8LP51|B8LP51_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 229
Score = 51.2 bits (121), Expect = 6e-05 Identities = 25/50 (50%), Positives = 33/50 (66%) Frame = +2
Query: 2 PFLLHSPSPSGHHVRGELYQVDSLAISRLDELEGVGKGHYERCPIYVRII 151 PFLL+ G HV GE+Y +D+ A+ R DELEG KGHY R I +R++ Sbjct: 96 PFLLYLDG-FGEHVFGEVYAIDAFALQRFDELEGTTKGHYVRRSIRLRLL 144
Score = 45.8 bits (107), Expect = 0.002 Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = +2
Query: 356 EVSGYMPAEAYFACADYGLRMADRAPH--IPCYTEKEALTYVRRKDRPHNRTFLEHVHAW 529 E + ++AYFA Y +M + H + Y+ +E YVRRKDRP + +FLEH++ + Sbjct: 148 EEENVLESQAYFAANSYTPQMWMKTRHNCLCTYSVEETKNYVRRKDRPPHLSFLEHINIF 207
Query: 530 IEKQ 541 + +Q Sbjct: 208 LSQQ 211
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