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NBDC - LSDB Archive
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DK948083
Clone id TST38A01NGRL0002_G01
Library
Length 695
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_G01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CAAAAAAGTTGGGGGAGATCGAGCAGGAATGGCCGCCGCTACTGCTGCCACATCTCTTGC
TTCGTCCTTCTTGGGCACCCAGGAGCTCTCAAACGGCGTCAAGAGCGTGGGAGTGAGCAA
TGGGGCGCGTGTGGTAGCGAGGTTTGGGGGCAAGAAGGGTGCGAAGGCAGCGCCCAGGAA
GAGCAGCTCCGCAGGCAGCAAGGATCGGCCTCTGTGGTACCCCGGCTGCAAGCCCCCCGC
ATGGCTGGATGGCTCTCTTGTAGGCGACTATGGCTTCGACCCGCTCTCTCTGGCCAAGCC
CGCAGAATATTTGCAGTTCGATTTCGACTCCTTGAACCAGAACTTGGCCAAGAATTCTGC
AGGGGAGATTATTGGAAATCGCGTGGACAGCATCACCAACATCAATGCCACTATCCAGCC
CTACGCAGAGGCCTTTGGTCTGCAGCGCTTCCGTGAATGCGAGCTCATCCATGGACGGTG
GGCCATGCTTGCTACATTGGGCGCCCTCGCCGTCGAAGCCTTCACTGGTGTCACATGGCA
AGATGCTGGCAAGGTTGAGCTTGTCGAGGGAGCTACCTACTTTGGCTTGCCTCTGCCCTT
CTCCATCTCCACACTGGTCTGGATCGAGGCCCTAGTCATTGGTTACATTGAGTTTCAAAG
GAATGGAGAGCTTGACCCCGAGAAGCGCCTTTACC
■■Homology search results ■■ -
sp_hit_id Q07473
Definition sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana
Align length 164
Score (bit) 267.0
E-value 5.0e-71
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948083|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_G01, 5'
         (695 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl...   267   5e-71
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...   265   1e-70
sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl...   254   2e-67
sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29 OS=Chl...   187   6e-47
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    81   5e-15
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    80   1e-14
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    79   2e-14
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    75   3e-13
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    74   6e-13
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    73   1e-12
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    72   3e-12
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    64   1e-09
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    62   4e-09
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    54   6e-07
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    52   4e-06
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    50   9e-06
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    49   3e-05
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    45   3e-04
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    43   0.001
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    41   0.005
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...    41   0.007
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    41   0.007
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    40   0.012
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    40   0.012
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...    40   0.012
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...    40   0.012
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    40   0.016
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...    40   0.016
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...    40   0.016
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    39   0.020

>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=2
           SV=1
          Length = 290

 Score =  267 bits (682), Expect = 5e-71
 Identities = 125/164 (76%), Positives = 138/164 (84%)
 Frame = +2

Query: 203 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 382
           DRPLWYPG   P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++IG R
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 562
            ++    +   QPY+E FG+QRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 114 TEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 173

Query: 563 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELD EKRLY
Sbjct: 174 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 217


>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1
           SV=1
          Length = 287

 Score =  265 bits (678), Expect = 1e-70
 Identities = 124/164 (75%), Positives = 138/164 (84%)
 Frame = +2

Query: 203 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 382
           DRPLW+PG K P +LDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN  GE+IG R
Sbjct: 51  DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTR 110

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 562
            +++   +   QPY+E FGLQRFRECELIHGRWAMLATLGA+ VE  TGVTWQDAGKVEL
Sbjct: 111 TEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVEL 170

Query: 563 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELD EKRLY
Sbjct: 171 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 214


>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2
           SV=1
          Length = 276

 Score =  254 bits (650), Expect = 2e-67
 Identities = 116/164 (70%), Positives = 134/164 (81%)
 Frame = +2

Query: 203 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 382
           DR +W+PG  PP WLDGS++GD GFDP  L KPAEYLQ+DFD L+QNLAKN AG+IIG  
Sbjct: 55  DRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGII 114

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 562
            +S        QPY E FG+QRFRECELIHGRWAML TLGA+AVEA TG+ WQDAGKVEL
Sbjct: 115 QESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVEL 174

Query: 563 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
           VEG++Y G PLPFS++TL+WIE LV+GYIEFQRN ELDPEKR+Y
Sbjct: 175 VEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIY 218


>sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29
           OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3
          Length = 280

 Score =  187 bits (474), Expect = 6e-47
 Identities = 94/164 (57%), Positives = 116/164 (70%), Gaps = 3/164 (1%)
 Frame = +2

Query: 212 LWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGE---IIGNR 382
           LW P    P WLDGSL GD GFDPL L+KP+E++    D  +QN AKN+ G    I+   
Sbjct: 52  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQAT 111

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 562
            D +++ N  + PY+E FGL RFRECELIHGRWAMLA LGAL  EA TGV+W +AGKVEL
Sbjct: 112 PDEVSSENR-LAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGKVEL 170

Query: 563 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
            +GA+Y GL LPFSI+ L+WIE +++G  EF RN E +PEKR Y
Sbjct: 171 -DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCY 213


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 56/163 (34%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
 Frame = +2

Query: 215 WYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSI 394
           W PG   P++LDGS  GD+GFD L L                       GE+  N     
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGL-----------------------GEVPAN----- 80

Query: 395 TNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVELVEG- 571
                          L+R++E ELIH RWAMLA  G +  EA     W  A +   + G 
Sbjct: 81  ---------------LERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGG 125

Query: 572 -ATYFGLPLPF-SISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
            ATY G P+P+ ++ T++ IE L I ++E QR+ E D EK+ Y
Sbjct: 126 QATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKY 168


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 51/155 (32%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
 Frame = +2

Query: 215 WYPGCK------PPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIG 376
           W P  K       P WLDGSL GD+GFDPL L K   +L++                   
Sbjct: 60  WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKW------------------- 100

Query: 377 NRVDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKV 556
                                   +RE ELIHGRWAMLA LG    +A+TG+ W +AG  
Sbjct: 101 ------------------------YREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAGAD 136

Query: 557 ELVEGATYFGLPLPFSISTLVWIEALVIGYIEFQR 661
                    G   PFS  TL+  + L++G++E +R
Sbjct: 137 P--------GAVAPFSFGTLLGTQLLLMGWVESKR 163


>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
           chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
          Length = 245

 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 57/163 (34%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
 Frame = +2

Query: 215 WYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSI 394
           W+PG   PA LDGS  GD+GFDPL LA   E                             
Sbjct: 48  WFPGQPRPAHLDGSSPGDFGFDPLGLATVPE----------------------------- 78

Query: 395 TNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK-VELVEG 571
                           +RF+E E+ H RWAML   G L  EA     W  A +   L +G
Sbjct: 79  --------------NFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDG 124

Query: 572 -ATYFGLPLPF-SISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
            ATY G P+P+ ++ T++ IE L I + E QR  E DPEK+ Y
Sbjct: 125 QATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKY 167


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 75.5 bits (184), Expect = 3e-13
 Identities = 46/142 (32%), Positives = 63/142 (44%)
 Frame = +2

Query: 236 PAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINATI 415
           P WLDGSL GDYGFDPL L K   +L++                                
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKW-------------------------------- 95

Query: 416 QPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVELVEGATYFGLPL 595
                      +RE ELIHGRWAM A LG    +A++G+ W +AG           G   
Sbjct: 96  -----------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADP--------GAIA 136

Query: 596 PFSISTLVWIEALVIGYIEFQR 661
           PFS  TL+  + +++G++E +R
Sbjct: 137 PFSFGTLLGTQLILMGWVESKR 158


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 48/155 (30%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
 Frame = +2

Query: 215 WYPGCKP------PAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIG 376
           W P  K       P WLDGSL GD+GFDPL L K   +L++                   
Sbjct: 55  WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKW------------------- 95

Query: 377 NRVDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKV 556
                                   +RE ELIHGRWAM A LG    +A++G+ W +AG  
Sbjct: 96  ------------------------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGAD 131

Query: 557 ELVEGATYFGLPLPFSISTLVWIEALVIGYIEFQR 661
                    G   PFS  +L+  + L++G++E +R
Sbjct: 132 P--------GAIAPFSFGSLLGTQLLLMGWVESKR 158


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 49/159 (30%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
 Frame = +2

Query: 203 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 382
           DRPLW+PG  PP WLDGSL GD+GFDPL LA   E L+++                    
Sbjct: 64  DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN-------------------- 103

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGV------TWQD 544
                                  ++ EL+H RWAML   G    E  T +      +W  
Sbjct: 104 -----------------------QQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYT 140

Query: 545 AGKVELVEGATYFGLPLPFSISTLVWIEALVIGYIEFQR 661
           AG+ E     T           TL  +E ++IG+ E +R
Sbjct: 141 AGEQEYFTDTT-----------TLFIVELVLIGWAEGRR 168
tr_hit_id B7FIZ5
Definition tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 193
Score (bit) 274.0
E-value 4.0e-72
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948083|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_G01, 5'
         (695 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medic...   274   4e-72
tr|Q9XQB2|Q9XQB2_PHAAU Chlorophyll a/b binding protein CP29 OS=P...   273   1e-71
tr|A9U3M1|A9U3M1_PHYPA Predicted protein OS=Physcomitrella paten...   270   8e-71
tr|A9T2F8|A9T2F8_PHYPA Predicted protein OS=Physcomitrella paten...   269   1e-70
tr|A7PP40|A7PP40_VITVI Chromosome chr8 scaffold_23, whole genome...   267   4e-70
tr|A5C288|A5C288_VITVI Putative uncharacterized protein OS=Vitis...   267   4e-70
tr|Q0WW97|Q0WW97_ARATH Lhcb4-protein OS=Arabidopsis thaliana GN=...   267   5e-70
tr|A9PIZ2|A9PIZ2_POPJC Putative uncharacterized protein OS=Popul...   266   7e-70
tr|Q6Z411|Q6Z411_ORYSJ Os07g0558400 protein OS=Oryza sativa subs...   265   2e-69
tr|O65217|O65217_ORYSA Chlorophyll a/b-binding protein OS=Oryza ...   265   2e-69
tr|A2YML1|A2YML1_ORYSI Putative uncharacterized protein OS=Oryza...   265   2e-69
tr|Q0PWS7|Q0PWS7_TOBAC Chloroplast pigment-binding protein CP29 ...   264   5e-69
tr|O24561|O24561_MAIZE Putative uncharacterized protein OS=Zea m...   263   6e-69
tr|A9PJF0|A9PJF0_POPJC Putative uncharacterized protein OS=Popul...   262   1e-68
tr|B4FJG1|B4FJG1_MAIZE Putative uncharacterized protein OS=Zea m...   262   2e-68
tr|A9PK34|A9PK34_POPJC Putative uncharacterized protein OS=Popul...   260   5e-68
tr|B7SB30|B7SB30_BAMOL LHCB4 OS=Bambusa oldhamii PE=2 SV=1            257   6e-67
tr|B7SAW1|B7SAW1_9POAL Chloroplast chlorophyll a/b binding prote...   256   1e-66
tr|A9P071|A9P071_PICSI Putative uncharacterized protein OS=Picea...   244   3e-63
tr|A9NYR8|A9NYR8_PICSI Putative uncharacterized protein OS=Picea...   244   3e-63
tr|A9NKX0|A9NKX0_PICSI Putative uncharacterized protein OS=Picea...   244   3e-63
tr|A3BL40|A3BL40_ORYSJ Putative uncharacterized protein OS=Oryza...   219   1e-55
tr|Q7XYQ5|Q7XYQ5_BIGNA Chlorophyll a/b-binding protein CP29 OS=B...   195   3e-48
tr|B1N8L8|B1N8L8_BRAOG Chloroplast chlorophyll a/b-binding prote...   195   3e-48
tr|A4QPJ4|A4QPJ4_ACEAT Chloroplast light-harvesting protein CP29...   191   3e-47
tr|B5A4H8|B5A4H8_GYMST Chlorophyll a/b binding protein CP29 OS=G...   191   5e-47
tr|A8J6D1|A8J6D1_CHLRE Chlorophyll a-b binding protein of photos...   187   7e-46
tr|A2SY49|A2SY49_CHLIN Light-harvesting chlorophyll-a/b binding ...   187   7e-46
tr|A2SY24|A2SY24_MESVI Light-harvesting chlorophyll-a/b binding ...   183   1e-44
tr|Q3B9U8|Q3B9U8_OSTTA Chloroplast chlorophyll a/b-binding prote...   182   1e-44

>tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 289

 Score =  274 bits (700), Expect = 4e-72
 Identities = 133/193 (68%), Positives = 144/193 (74%)
 Frame = +2

Query: 116 SNGARVVARFXXXXXXXXXXXXXXXXXXXDRPLWYPGCKPPAWLDGSLVGDYGFDPLSLA 295
           SN  R+ ARF                   DRPLW+PG K P WLDGSLVGDYGFDP  L 
Sbjct: 24  SNSGRIQARFGFGKKKAAPKKPSRSSPSTDRPLWFPGAKSPEWLDGSLVGDYGFDPFGLG 83

Query: 296 KPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINATIQPYAEAFGLQRFRECELIHG 475
           KPAEYLQFD DSL+QNLAKN AG++IG R +     +   QPY+E FGLQRFRECELIHG
Sbjct: 84  KPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFADVKSTPFQPYSEVFGLQRFRECELIHG 143

Query: 476 RWAMLATLGALAVEAFTGVTWQDAGKVELVEGATYFGLPLPFSISTLVWIEALVIGYIEF 655
           RWAMLATLGAL VE  TGVTWQDAGKVELVEG+TY G PLPFSI+TL+WIE LVIGYIEF
Sbjct: 144 RWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYLGQPLPFSITTLIWIEVLVIGYIEF 203

Query: 656 QRNGELDPEKRLY 694
           QRN ELD EKRLY
Sbjct: 204 QRNAELDSEKRLY 216


>tr|Q9XQB2|Q9XQB2_PHAAU Chlorophyll a/b binding protein CP29
           OS=Phaseolus aureus GN=CipCp29 PE=2 SV=1
          Length = 290

 Score =  273 bits (697), Expect = 1e-71
 Identities = 133/193 (68%), Positives = 144/193 (74%)
 Frame = +2

Query: 116 SNGARVVARFXXXXXXXXXXXXXXXXXXXDRPLWYPGCKPPAWLDGSLVGDYGFDPLSLA 295
           S   R+ ARF                   DRPLWYPG K P WLDGSLVGDYGFDP  L 
Sbjct: 24  SGSGRIQARFGFGSKKKAAPKKVSKGPSTDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG 83

Query: 296 KPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINATIQPYAEAFGLQRFRECELIHG 475
           KPAEYLQF+ DSL+QNLAKN AG IIG R +     +   QPY+E FGLQRFRECELIHG
Sbjct: 84  KPAEYLQFELDSLDQNLAKNEAGIIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHG 143

Query: 476 RWAMLATLGALAVEAFTGVTWQDAGKVELVEGATYFGLPLPFSISTLVWIEALVIGYIEF 655
           RWAMLATLGAL+VE  TGVTWQDAGKVELVEG++Y G PLPFSI+TL+WIE LVIGYIEF
Sbjct: 144 RWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF 203

Query: 656 QRNGELDPEKRLY 694
           QRN ELDPEKRLY
Sbjct: 204 QRNAELDPEKRLY 216


>tr|A9U3M1|A9U3M1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_228001 PE=4 SV=1
          Length = 296

 Score =  270 bits (689), Expect = 8e-71
 Identities = 136/206 (66%), Positives = 153/206 (74%), Gaps = 7/206 (3%)
 Frame = +2

Query: 98  VKSVGVSNGARVVARFXXXXXXXXXXXXXXXXXXX------DRPLWYPGCKPPAWLDGSL 259
           V+  GV NGARVVAR                          DRPLW+PG + P WLDGSL
Sbjct: 19  VECFGVKNGARVVARSSLGGKAKQVAKQASKTLKKSSGAGADRPLWFPGARAPEWLDGSL 78

Query: 260 VGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINAT-IQPYAEAF 436
            GDYGFDPLSL K  EYLQ + DSLNQNLAKN AG++IG R+     I  T  QPY+E F
Sbjct: 79  PGDYGFDPLSLGKSPEYLQIELDSLNQNLAKNEAGDVIGTRISKKEEIAPTPFQPYSEVF 138

Query: 437 GLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVELVEGATYFGLPLPFSISTL 616
           GLQRFRECELIHGRWAMLA LGAL+VEAFTGVTWQDAGKVELV+GA+YFGLPLPFSI++L
Sbjct: 139 GLQRFRECELIHGRWAMLAILGALSVEAFTGVTWQDAGKVELVDGASYFGLPLPFSITSL 198

Query: 617 VWIEALVIGYIEFQRNGELDPEKRLY 694
           V+IEA ++G+IEFQRN ELDPEKRLY
Sbjct: 199 VYIEAFLVGFIEFQRNAELDPEKRLY 224


>tr|A9T2F8|A9T2F8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_218263 PE=4 SV=1
          Length = 296

 Score =  269 bits (688), Expect = 1e-70
 Identities = 135/206 (65%), Positives = 154/206 (74%), Gaps = 7/206 (3%)
 Frame = +2

Query: 98  VKSVGVSNGARVVARFXXXXXXXXXXXXXXXXXXX------DRPLWYPGCKPPAWLDGSL 259
           V+ +GV NG+RVVARF                          RPLW+PG + P WLDGSL
Sbjct: 19  VERLGVQNGSRVVARFSVPGKAKQAAKAASKAVKKASGSGAGRPLWFPGAQAPEWLDGSL 78

Query: 260 VGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINAT-IQPYAEAF 436
            GDYGFDPLSL K  EYLQ + DSLNQNLAKN AG++IG R+     I  T  QPY+E F
Sbjct: 79  PGDYGFDPLSLGKSPEYLQIELDSLNQNLAKNEAGDVIGTRISKKEEIAPTPFQPYSEVF 138

Query: 437 GLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVELVEGATYFGLPLPFSISTL 616
           GLQRFRECELIHGRWAMLA LGAL+VEAFTGVTWQDAGKVELV+GA+YFGLPLPFSI++L
Sbjct: 139 GLQRFRECELIHGRWAMLAILGALSVEAFTGVTWQDAGKVELVDGASYFGLPLPFSITSL 198

Query: 617 VWIEALVIGYIEFQRNGELDPEKRLY 694
           V+IEA ++G+IEFQRN ELDPEKRLY
Sbjct: 199 VYIEAFLVGFIEFQRNAELDPEKRLY 224


>tr|A7PP40|A7PP40_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021499001
           PE=4 SV=1
          Length = 342

 Score =  267 bits (683), Expect = 4e-70
 Identities = 123/164 (75%), Positives = 139/164 (84%)
 Frame = +2

Query: 203 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 382
           DRPLW+PG   P WLDG+LVGDYGFDP  L KPAEYLQ+D+DSL+QNLAKN AG++IG R
Sbjct: 106 DRPLWFPGAVAPEWLDGTLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNIAGDVIGTR 165

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 562
            +     +   QPY E FGLQRFRECELIHGRWAMLATLGALAVE+ TGVTWQDAGKVEL
Sbjct: 166 FEGGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVEL 225

Query: 563 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
           +EG++Y G PLPFS++TL+WIE LVIGYIEFQRN ELDPEKRLY
Sbjct: 226 IEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNAELDPEKRLY 269


>tr|A5C288|A5C288_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_010727 PE=4 SV=1
          Length = 288

 Score =  267 bits (683), Expect = 4e-70
 Identities = 123/164 (75%), Positives = 139/164 (84%)
 Frame = +2

Query: 203 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 382
           DRPLW+PG   P WLDG+LVGDYGFDP  L KPAEYLQ+D+DSL+QNLAKN AG++IG R
Sbjct: 52  DRPLWFPGAVAPEWLDGTLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNIAGDVIGTR 111

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 562
            +     +   QPY E FGLQRFRECELIHGRWAMLATLGALAVE+ TGVTWQDAGKVEL
Sbjct: 112 FEGGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVEL 171

Query: 563 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
           +EG++Y G PLPFS++TL+WIE LVIGYIEFQRN ELDPEKRLY
Sbjct: 172 IEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNAELDPEKRLY 215


>tr|Q0WW97|Q0WW97_ARATH Lhcb4-protein OS=Arabidopsis thaliana
           GN=At5g01530 PE=2 SV=1
          Length = 290

 Score =  267 bits (682), Expect = 5e-70
 Identities = 125/164 (76%), Positives = 138/164 (84%)
 Frame = +2

Query: 203 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 382
           DRPLWYPG   P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++IG R
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 562
            ++    +   QPY+E FG+QRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 114 TEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 173

Query: 563 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELD EKRLY
Sbjct: 174 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLY 217


>tr|A9PIZ2|A9PIZ2_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 285

 Score =  266 bits (681), Expect = 7e-70
 Identities = 131/193 (67%), Positives = 146/193 (75%)
 Frame = +2

Query: 116 SNGARVVARFXXXXXXXXXXXXXXXXXXXDRPLWYPGCKPPAWLDGSLVGDYGFDPLSLA 295
           SN  R+ ARF                   DRPLWYPG K P +LDGSLVGDYGFDP  L 
Sbjct: 23  SNSGRIQARFGFGGKKAPKKSIKPSTP--DRPLWYPGAKAPEYLDGSLVGDYGFDPFGLG 80

Query: 296 KPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINATIQPYAEAFGLQRFRECELIHG 475
           KPAEYLQF+ DSL+QNLAKN AG+IIG R +     +   QPY+E FGLQRFRECELIHG
Sbjct: 81  KPAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTPFQPYSEVFGLQRFRECELIHG 140

Query: 476 RWAMLATLGALAVEAFTGVTWQDAGKVELVEGATYFGLPLPFSISTLVWIEALVIGYIEF 655
           RWAMLATLGAL+VE  TGVTWQDAGKVELVEG++Y G PLPFSI+ L+WIEA++IGYIEF
Sbjct: 141 RWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITALIWIEAVIIGYIEF 200

Query: 656 QRNGELDPEKRLY 694
           QRN ELDPEKRLY
Sbjct: 201 QRNAELDPEKRLY 213


>tr|Q6Z411|Q6Z411_ORYSJ Os07g0558400 protein OS=Oryza sativa subsp.
           japonica GN=P0567H04.14 PE=2 SV=1
          Length = 290

 Score =  265 bits (677), Expect = 2e-69
 Identities = 126/164 (76%), Positives = 139/164 (84%)
 Frame = +2

Query: 203 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 382
           DRPLW+PG   P +LDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN+AGEIIG R
Sbjct: 53  DRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTR 112

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 562
            ++    +   QPY E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 113 FETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 172

Query: 563 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELDPEKRLY
Sbjct: 173 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLY 216


>tr|O65217|O65217_ORYSA Chlorophyll a/b-binding protein OS=Oryza
           sativa GN=RCABP69 PE=2 SV=1
          Length = 290

 Score =  265 bits (677), Expect = 2e-69
 Identities = 126/164 (76%), Positives = 139/164 (84%)
 Frame = +2

Query: 203 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 382
           DRPLW+PG   P +LDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN+AGEIIG R
Sbjct: 53  DRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTR 112

Query: 383 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 562
            ++    +   QPY E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 113 FETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 172

Query: 563 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLY 694
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELDPEKRLY
Sbjct: 173 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLY 216