DK948107 |
Clone id |
TST38A01NGRL0002_H02 |
Library |
TST38 |
Length |
681 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_H02. 5' end sequence. |
Accession |
DK948107 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1184Contig1 |
Sequence |
GCAGTTAACATCCTTTCAGCCTGGGGCTACAGGAAGTAAACTGAAAGGAAACAAGATTCA CTGCTCTACTGTCGTATTACCAGATGACAGTAGGCAATCAGTGCTAACTGATTTACAGAT AGGAAGCTCAAGTGGTTGTCCTAGTTATCATCTGCCACAAGATGAAGGCTGGACGACTTC TAGCTCTTCTTGCACTGTTGGGAACCTAGCTTCATCTGGAGCAGAGCTCTCTCTTGCAAC AGCTTCCATCATGAGTAATGCTAGCACAGAGTTTTCAGGTGATTGCCTAGTAGATAGCTG TACAGACGAAAATCATATTAGTTGTTCCAAAGCTGGCATTTCTGTTGGTCAAATGCTGGG GTGCACGGACTCAAGTGCCGAAGAGAGGAAGACAGTCATGCTGTGGCAGCTGGTTGATCG TGTCAAATACCTTGAGGCCCAACTTCAAGACTGGACTGATTGGGCACAACAAAAGGTTAT GCAAGCTGCTCGAAGGCTAACAAAGGATACAGCTGAGCTCAAAGCTCTCAGGCAAGAGAG GGATGAGTACATGCGCCTAAAGAAAGAAAAGCAAGCTTTGGAGGAGAGTACGATGAAGAA GTTGGCAGAAATGGAAACCTCTTTGGGTAAAGCTCTCAGTCAAGTGGAACGTGCTAATAC AACTGCAGGGAGGTTAGAATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q86YS3 |
Definition |
sp|Q86YS3|RFIP4_HUMAN Rab11 family-interacting protein 4 OS=Homo sapiens |
Align length |
155 |
Score (bit) |
38.5 |
E-value |
0.033 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NWC3 |
Definition |
tr|A7NWC3|A7NWC3_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
165 |
Score (bit) |
129.0 |
E-value |
1.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948107|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_H02, 5' (681 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NWC3|A7NWC3_VITVI Chromosome chr5 scaffold_2, whole genome ... 129 1e-28 tr|Q75KG8|Q75KG8_ORYSJ Os05g0141500 protein OS=Oryza sativa subs... 105 3e-21 tr|A3AZU2|A3AZU2_ORYSJ Putative uncharacterized protein OS=Oryza... 105 3e-21 tr|A2Y094|A2Y094_ORYSI Putative uncharacterized protein OS=Oryza... 105 3e-21 tr|Q9ZT97|Q9ZT97_ARATH Putative uncharacterized protein AT4g0300... 105 3e-21 tr|Q0WPJ7|Q0WPJ7_ARATH Putative uncharacterized protein At4g0300... 105 3e-21 tr|Q9ZVT8|Q9ZVT8_ARATH F15K9.3 OS=Arabidopsis thaliana GN=F15K9.... 103 1e-20 tr|A7PCB1|A7PCB1_VITVI Chromosome chr2 scaffold_11, whole genome... 99 2e-19 tr|Q8L7B1|Q8L7B1_ARATH Putative uncharacterized protein At2g3533... 98 6e-19 tr|O82304|O82304_ARATH Putative uncharacterized protein At2g3533... 98 6e-19 tr|A9SWJ7|A9SWJ7_PHYPA Predicted protein OS=Physcomitrella paten... 96 2e-18 tr|B6UF42|B6UF42_MAIZE Putative uncharacterized protein OS=Zea m... 91 7e-17 tr|A3BY70|A3BY70_ORYSJ Putative uncharacterized protein OS=Oryza... 90 1e-16 tr|A5ANR3|A5ANR3_VITVI Putative uncharacterized protein OS=Vitis... 86 3e-15 tr|Q9LQK4|Q9LQK4_ARATH F5D14.31 protein OS=Arabidopsis thaliana ... 80 1e-13 tr|Q8RX22|Q8RX22_ARATH Putative uncharacterized protein At1g3253... 80 1e-13 tr|Q9C7Y6|Q9C7Y6_ARATH Putative uncharacterized protein T9G5.5 (... 78 5e-13 tr|Q0WVX7|Q0WVX7_ARATH Putative uncharacterized protein At4g0300... 57 1e-06 tr|B0WQ58|B0WQ58_CULQU Myosin-Va OS=Culex quinquefasciatus GN=Cp... 44 0.009 tr|A3UBM6|A3UBM6_9FLAO Putative uncharacterized protein OS=Croce... 43 0.021 tr|Q7Q368|Q7Q368_ANOGA AGAP007734-PA (Fragment) OS=Anopheles gam... 42 0.047 tr|Q4SS35|Q4SS35_TETNG Chromosome 11 SCAF14479, whole genome sho... 41 0.062 tr|B4NIH2|B4NIH2_DROWI GK14307 OS=Drosophila willistoni GN=GK143... 41 0.062 tr|B0EH70|B0EH70_ENTDI Trichohyalin, putative OS=Entamoeba dispa... 41 0.080 tr|Q15Z17|Q15Z17_PSEA6 Putative uncharacterized protein OS=Pseud... 40 0.10 tr|Q4UB54|Q4UB54_THEAN Putative uncharacterized protein OS=Theil... 40 0.10 tr|B3DGU2|B3DGU2_DANRE RAB11 family interacting protein 4 (Class... 40 0.14 tr|Q7ULB8|Q7ULB8_RHOBA Vegetatible incompatibility protein HET-E... 40 0.14 tr|A4RH05|A4RH05_MAGGR Peptidyl-prolyl cis-trans isomerase OS=Ma... 40 0.14 tr|Q17MT5|Q17MT5_AEDAE Putative uncharacterized protein OS=Aedes... 40 0.18
>tr|A7NWC3|A7NWC3_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019866001 PE=4 SV=1 Length = 797
Score = 129 bits (325), Expect = 1e-28 Identities = 79/165 (47%), Positives = 102/165 (61%), Gaps = 3/165 (1%) Frame = +2
Query: 194 TVGNLASSGAELSLA---TASIMSNASTEFSGDCLVDSCTDENHISCSKAGISVGQMLGC 364 T+G+L + + +L T I S A TE S S + S+GQ + Sbjct: 392 TIGSLPKTNSPSALPPVNTPPIPSGADTELSLSLTTKS----------NSAPSLGQWV-- 439
Query: 365 TDSSAEERKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLTKDTAELKALRQERD 544 +++K M+ +LV RV+ L+ QLQ+WT+WA QKVMQAARRL KD AELK LRQE++ Sbjct: 440 ----PQDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKE 495
Query: 545 EYMRLKKEKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 E RLKKEKQ LE++T KKL+EME +LGKA QVERAN RLE Sbjct: 496 EVERLKKEKQTLEDNTAKKLSEMENALGKASGQVERANAAVRRLE 540
>tr|Q75KG8|Q75KG8_ORYSJ Os05g0141500 protein OS=Oryza sativa subsp. japonica GN=OJ1489_G03.8 PE=2 SV=1 Length = 868
Score = 105 bits (262), Expect = 3e-21 Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 3/179 (1%) Frame = +2
Query: 152 LPQDEGWTTSSSSCTVGNLASSGAELSLATASIMSNASTEFSGDCLVDSCTDENHISCSK 331 LP + + SS + L ++ +LSL+ SN S S + E S SK Sbjct: 446 LPSNPSFDAKLSS-NLNPLPAASTDLSLSLPLPSSNDSPAPSSN---HDANTEGMDSSSK 501
Query: 332 AGISVGQMLGCTDSSA---EERKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLT 502 +S + D +++K M+ LV R K L+A ++DWTDWAQQKVMQ RRL Sbjct: 502 INLSYDE-----DQKVWIPQDKKDEMVLILVQRQKELQAHMRDWTDWAQQKVMQVTRRLA 556
Query: 503 KDTAELKALRQERDEYMRLKKEKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 K+ EL +LR+E++E RL++E+ LEEST KKL EME+++ +A +Q+E+A ++A R E Sbjct: 557 KEKEELHSLRKEKEEADRLQEERHNLEESTRKKLLEMESAISRANTQLEKAESSARRRE 615
>tr|A3AZU2|A3AZU2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_016314 PE=4 SV=1 Length = 715
Score = 105 bits (262), Expect = 3e-21 Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 3/179 (1%) Frame = +2
Query: 152 LPQDEGWTTSSSSCTVGNLASSGAELSLATASIMSNASTEFSGDCLVDSCTDENHISCSK 331 LP + + SS + L ++ +LSL+ SN S S + E S SK Sbjct: 310 LPSNPSFDAKLSS-NLNPLPAASTDLSLSLPLPSSNDSPAPSSN---HDANTEGMDSSSK 365
Query: 332 AGISVGQMLGCTDSSA---EERKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLT 502 +S + D +++K M+ LV R K L+A ++DWTDWAQQKVMQ RRL Sbjct: 366 INLSYDE-----DQKVWIPQDKKDEMVLILVQRQKELQAHMRDWTDWAQQKVMQVTRRLA 420
Query: 503 KDTAELKALRQERDEYMRLKKEKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 K+ EL +LR+E++E RL++E+ LEEST KKL EME+++ +A +Q+E+A ++A R E Sbjct: 421 KEKEELHSLRKEKEEADRLQEERHNLEESTRKKLLEMESAISRANTQLEKAESSARRRE 479
>tr|A2Y094|A2Y094_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18406 PE=4 SV=1 Length = 868
Score = 105 bits (262), Expect = 3e-21 Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 3/179 (1%) Frame = +2
Query: 152 LPQDEGWTTSSSSCTVGNLASSGAELSLATASIMSNASTEFSGDCLVDSCTDENHISCSK 331 LP + + SS + L ++ +LSL+ SN S S + E S SK Sbjct: 446 LPSNPSFDAKLSS-NLNPLPAASTDLSLSLPLPSSNDSPAPSSN---HDANTEGMDSSSK 501
Query: 332 AGISVGQMLGCTDSSA---EERKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLT 502 +S + D +++K M+ LV R K L+A ++DWTDWAQQKVMQ RRL Sbjct: 502 INLSYDE-----DQKVWIPQDKKDEMVLILVQRQKELQAHMRDWTDWAQQKVMQVTRRLA 556
Query: 503 KDTAELKALRQERDEYMRLKKEKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 K+ EL +LR+E++E RL++E+ LEEST KKL EME+++ +A +Q+E+A ++A R E Sbjct: 557 KEKEELHSLRKEKEEADRLQEERHNLEESTRKKLLEMESAISRANTQLEKAESSARRRE 615
>tr|Q9ZT97|Q9ZT97_ARATH Putative uncharacterized protein AT4g03000 OS=Arabidopsis thaliana GN=T4I9.12 PE=2 SV=1 Length = 864
Score = 105 bits (261), Expect = 3e-21 Identities = 52/98 (53%), Positives = 71/98 (72%) Frame = +2
Query: 386 RKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLTKDTAELKALRQERDEYMRLKK 565 ++ ++ +LV R+K L+ +LQDWTDWA QKV QA RL KD ELKALR+E++E +K Sbjct: 463 KRDELILKLVPRMKDLQKELQDWTDWANQKVKQATVRLLKDQPELKALRKEKEEAEEFRK 522
Query: 566 EKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 EKQ LEE+T+K+ +EME +L A +Q+ER N T RLE Sbjct: 523 EKQLLEENTIKRRSEMELALNNATNQLERTNNTIRRLE 560
>tr|Q0WPJ7|Q0WPJ7_ARATH Putative uncharacterized protein At4g03000 OS=Arabidopsis thaliana GN=At4g03000 PE=2 SV=1 Length = 814
Score = 105 bits (261), Expect = 3e-21 Identities = 52/98 (53%), Positives = 71/98 (72%) Frame = +2
Query: 386 RKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLTKDTAELKALRQERDEYMRLKK 565 ++ ++ +LV R+K L+ +LQDWTDWA QKV QA RL KD ELKALR+E++E +K Sbjct: 463 KRDELILKLVPRMKDLQKELQDWTDWANQKVKQATVRLLKDQPELKALRKEKEEAEEFRK 522
Query: 566 EKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 EKQ LEE+T+K+ +EME +L A +Q+ER N T RLE Sbjct: 523 EKQLLEENTIKRRSEMELALNNATNQLERTNNTIRRLE 560
>tr|Q9ZVT8|Q9ZVT8_ARATH F15K9.3 OS=Arabidopsis thaliana GN=F15K9.3 PE=4 SV=1 Length = 823
Score = 103 bits (256), Expect = 1e-20 Identities = 54/99 (54%), Positives = 72/99 (72%) Frame = +2
Query: 383 ERKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLTKDTAELKALRQERDEYMRLK 562 ++K ++ +LV RV L+ +LQ WTDWA QKV +A RL KD ELKALR+ER+E + K Sbjct: 492 DKKDELILKLVPRVNDLQNELQVWTDWANQKVKEATGRLLKDQPELKALRKEREEAEQYK 551
Query: 563 KEKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 KEKQ LEE+T K+L+EM+ +L A SQ+E+A TA RLE Sbjct: 552 KEKQLLEENTRKRLSEMDFALKNATSQLEKAFNTAHRLE 590
>tr|A7PCB1|A7PCB1_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015790001 PE=4 SV=1 Length = 723
Score = 99.4 bits (246), Expect = 2e-19 Identities = 49/101 (48%), Positives = 72/101 (71%) Frame = +2
Query: 377 AEERKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLTKDTAELKALRQERDEYMR 556 AE++K M+ L+ ++K L+ Q+++ +WA Q+ MQAAR+L+ D ELK LR E +E + Sbjct: 374 AEDQKDEMVLTLIHQIKELDRQVKERREWAHQRAMQAARKLSHDLTELKMLRMEMEETQQ 433
Query: 557 LKKEKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 LKK KQ LE++TMK+L++ME +L KA QV+RAN RLE Sbjct: 434 LKKGKQTLEDTTMKRLSDMENALRKASGQVDRANAAVRRLE 474
>tr|Q8L7B1|Q8L7B1_ARATH Putative uncharacterized protein At2g35330 OS=Arabidopsis thaliana GN=At2g35330 PE=2 SV=1 Length = 738
Score = 97.8 bits (242), Expect = 6e-19 Identities = 51/104 (49%), Positives = 74/104 (71%) Frame = +2
Query: 368 DSSAEERKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLTKDTAELKALRQERDE 547 DS+ EE K L L+ +V+ L+ QL++ DWAQ+K MQAA++++ + +ELK+LR ER+E Sbjct: 387 DSAPEELKDDALIGLLQQVQDLKKQLKERKDWAQKKAMQAAQKVSDELSELKSLRSEREE 446
Query: 548 YMRLKKEKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 R+KK KQ E+ST+KKL+EME +L KA QV++AN LE Sbjct: 447 IQRVKKGKQTREDSTLKKLSEMENALRKASGQVDKANAVVRALE 490
>tr|O82304|O82304_ARATH Putative uncharacterized protein At2g35330 OS=Arabidopsis thaliana GN=At2g35330 PE=4 SV=1 Length = 711
Score = 97.8 bits (242), Expect = 6e-19 Identities = 51/104 (49%), Positives = 74/104 (71%) Frame = +2
Query: 368 DSSAEERKTVMLWQLVDRVKYLEAQLQDWTDWAQQKVMQAARRLTKDTAELKALRQERDE 547 DS+ EE K L L+ +V+ L+ QL++ DWAQ+K MQAA++++ + +ELK+LR ER+E Sbjct: 360 DSAPEELKDDALIGLLQQVQDLKKQLKERKDWAQKKAMQAAQKVSDELSELKSLRSEREE 419
Query: 548 YMRLKKEKQALEESTMKKLAEMETSLGKALSQVERANTTAGRLE 679 R+KK KQ E+ST+KKL+EME +L KA QV++AN LE Sbjct: 420 IQRVKKGKQTREDSTLKKLSEMENALRKASGQVDKANAVVRALE 463
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