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NBDC - LSDB Archive
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DK948123
Clone id TST38A01NGRL0002_H18
Library
Length 666
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_H18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TTCCTCCTCTGCGTAACATTTTGTGAAGCGAGGGACGATCTGCCGTGAAAGGGAGGTCGC
CATGGCCGTCGTGGCATCGAAAGCTCTGTTGTCGTCCTCTCTCTCAACAACTACCGCTCC
AGCGACTACCTCGCCCGACTGTTCCCGCCAGCAATTCTTGGGCGGGAGGGCTCTCCGAGC
AGCGGGCCCCTCTTCTTCCTCCAAGCGCGCGTCCTCCTTCACCGTTCGCGCAACCGCCGA
TAAGCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCTCCAAGCAAAGTCTAAGCTATCT
AGATGGCAGCCTTCCTGGTGACTTTGGGTTTGATCCCTTGGGTTTGATGGACCCAGAGGG
GCCTGGAGGCTTCATTGAACCTGATTGGTTGAGGTATGGAGAAATCATCAATGGAAGATA
TGCAATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGATCCTTGGCAAGGCTGGTCTCAT
CCCTCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATCCCACCTCTAGGAACCTA
CAACTACTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATGGCCCTCATGGGCTTTGC
TGAGCACCGAAGAGCACAGGATTATTATAAGCCTGGATCGATGGGAAAGCAGTATTTCTT
AGGTTT
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 151
Score (bit) 263.0
E-value 8.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948123|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_H18, 5'
         (666 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   263   8e-70
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   261   3e-69
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   107   7e-23
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   104   5e-22
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    89   3e-17
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    87   8e-17
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    81   6e-15
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    70   1e-11
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    67   6e-11
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    65   2e-10
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    64   5e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    64   7e-10
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    62   2e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    62   2e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    62   3e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    62   4e-09
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    61   5e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    61   6e-09
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...    61   6e-09
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    60   8e-09
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    60   8e-09
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    60   1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    60   1e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    60   1e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   2e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    59   2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    59   2e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  263 bits (671), Expect = 8e-70
 Identities = 126/151 (83%), Positives = 133/151 (88%), Gaps = 2/151 (1%)
 Frame = +2

Query: 218 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 391
           F VRA +  PVK   +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 392 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 571
            YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97  AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 572 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
           VLEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 157 VLEMALMGFAEHRRFQDWAKPGSMGKQYFLG 187


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  261 bits (666), Expect = 3e-69
 Identities = 126/150 (84%), Positives = 132/150 (88%), Gaps = 3/150 (2%)
 Frame = +2

Query: 224 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 394
           VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL 
Sbjct: 40  VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 395 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 574
           YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 575 LEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
           LEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGKQYFLG 189


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  107 bits (266), Expect = 7e-23
 Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
 Frame = +2

Query: 143 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 322
           ++  FLGGR LR +            TV   AD     DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 323 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 499
           FGFDPLGL  DPE         W +  E+++ R+AMLGA G   PE+L K G++   +  
Sbjct: 86  FGFDPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 500 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 637
            W+        G   Y+ D  TLF++E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPG 176



 Score = 33.9 bits (76), Expect = 0.79
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +2

Query: 290 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 445
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  104 bits (259), Expect = 5e-22
 Identities = 67/166 (40%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = +2

Query: 143 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 322
           ++  FLGG+ LR +             V A A  P   DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 323 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 499
           FGFDPLGL  DPE         W    E+++ R+AMLGA G   PE L K G++   +  
Sbjct: 86  FGFDPLGLGSDPE------SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 500 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 637
            W+        G   Y+ D  TLFV+E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 176



 Score = 33.9 bits (76), Expect = 0.79
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +2

Query: 290 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 445
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 88.6 bits (218), Expect = 3e-17
 Identities = 63/178 (35%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
 Frame = +2

Query: 146 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 325
           + +FLGG    ++G               +A   V+  +  W     S  YL GSLPGD 
Sbjct: 19  KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 326 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 502
           GFDPLGL  DPE    F++       E++NGR+AMLG  G + PE+    G+I       
Sbjct: 75  GFDPLGLAEDPENLRWFVQ------AELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 503 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMG-----KQYFL 661
           W+        G   Y+A   TLFV+E  L  + E RR QD   PGS+      KQY L
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSL 177


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 87.0 bits (214), Expect = 8e-17
 Identities = 58/149 (38%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
 Frame = +2

Query: 233 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEII 409
           T+   V+  +  W     S  YL GSL GD GFDPLGL  DPE    F++       E++
Sbjct: 45  TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQ------AELV 98

Query: 410 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 589
           NGR+AMLG  G + PE+  K G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 99  NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 590 MGFAEHRRAQDYYKPGSMG-----KQYFL 661
             + E RR QD   PGS+      KQY L
Sbjct: 150 FHYVEIRRWQDIKNPGSVNQDPIFKQYSL 178


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 54/128 (42%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
 Frame = +2

Query: 269 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 445
           W    QS +YLDGSL GD GFDPL L  DPE    F++ D      ++NGR+AMLG  G 
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQAD------VVNGRWAMLGVAGM 89

Query: 446 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDY 625
           + PE+L KAGL+    A  W R   +P  G   Y+A   T   + M+   + E RR QD 
Sbjct: 90  LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS-STYVEIRRWQDI 140

Query: 626 YKPGSMGK 649
             PGS+ +
Sbjct: 141 KNPGSVNQ 148


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
 Frame = +2

Query: 296 YLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKA 472
           +LDGSLPGDFGFDPLGL  DP     F++  W R  E+I+GR+AML  +G      +G+A
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP----AFLK--WYREAELIHGRWAMLAVLGI----FVGQA 124

Query: 473 GLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 649
                 T + WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P S   
Sbjct: 125 W-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSV 175

Query: 650 QY 655
           ++
Sbjct: 176 EW 177


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 67.4 bits (163), Expect = 6e-11
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
 Frame = +2

Query: 218 FTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLR 394
           FTV A A K   +       +     +LDGSLPGD+GFDPLGL  DP     F++  W R
Sbjct: 44  FTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP----AFLK--WYR 97

Query: 395 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLF 571
             E+I+GR+AM   +G      +G+A      + + WF  G  P  +  +++     TL 
Sbjct: 98  EAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLL 144

Query: 572 VLEMALMGFAEHRRAQDYYKPGSMGKQY 655
             ++ LMG+ E +R  D++ P S   ++
Sbjct: 145 GTQLILMGWVESKRWVDFFDPDSQSVEW 172


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 45/121 (37%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
 Frame = +2

Query: 269 WFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRY--GEIINGRYAMLGAVG 442
           W   +   SYLDGS PGDFGFD LGL       G +  +  RY   E+I+ R+AML   G
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGL-------GEVPANLERYKESELIHCRWAMLAVPG 101

Query: 443 AIAPEILGKAGLI-PQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQ 619
            I PE LG    +  QE A +    G    LG    W    T+  +E   + F EH+R+ 
Sbjct: 102 IIVPEALGLGNWVKAQEWAAI--PGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSM 159

Query: 620 D 622
           +
Sbjct: 160 E 160
tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 176
Score (bit) 274.0
E-value 4.0e-72
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948123|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_H18, 5'
         (666 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   274   4e-72
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   268   3e-70
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   266   7e-70
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   266   9e-70
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   264   4e-69
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   263   7e-69
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   260   6e-68
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   258   2e-67
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   256   1e-66
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   256   1e-66
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   253   1e-65
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   251   2e-65
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   251   2e-65
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   249   1e-64
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   249   1e-64
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   249   1e-64
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   248   2e-64
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   248   2e-64
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   219   9e-56
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   217   6e-55
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   215   2e-54
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   215   2e-54
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   201   3e-50
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   201   3e-50
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   197   5e-49
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   197   5e-49
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   196   8e-49
tr|A2SY38|A2SY38_CHLIN Light-harvesting chlorophyll-a/b binding ...   194   4e-48
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr...   193   9e-48
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   190   8e-47

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  274 bits (700), Expect = 4e-72
 Identities = 137/176 (77%), Positives = 147/176 (83%), Gaps = 3/176 (1%)
 Frame = +2

Query: 146 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 316
           +Q  LGG+AL              FTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLP
Sbjct: 25  QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 317 GDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 496
           GD+GFDPLGLMDPEGPGGF+EP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85  GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 497 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
           + WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY  PGSMGKQYFLG
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPGSMGKQYFLG 200


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  268 bits (684), Expect = 3e-70
 Identities = 131/152 (86%), Positives = 137/152 (90%), Gaps = 3/152 (1%)
 Frame = +2

Query: 218 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDW 388
           F VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFIEP W
Sbjct: 51  FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 389 LRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 568
           L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 569 FVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
           FVLEMALMGFAEHRR QDY  PGSM KQYFLG
Sbjct: 171 FVLEMALMGFAEHRRLQDYRYPGSMSKQYFLG 202


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  266 bits (681), Expect = 7e-70
 Identities = 129/150 (86%), Positives = 134/150 (89%), Gaps = 1/150 (0%)
 Frame = +2

Query: 218 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 394
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 395 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 574
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 575 LEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
            EMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 159 FEMALMGFAEHRRLQDWAKPGSMGKQYFLG 188


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  266 bits (680), Expect = 9e-70
 Identities = 129/150 (86%), Positives = 134/150 (89%), Gaps = 1/150 (0%)
 Frame = +2

Query: 218 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 394
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 395 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 574
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 575 LEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
            EMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 159 FEMALMGFAEHRRFQDWAKPGSMGKQYFLG 188


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  264 bits (674), Expect = 4e-69
 Identities = 131/175 (74%), Positives = 140/175 (80%), Gaps = 3/175 (1%)
 Frame = +2

Query: 149 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 319
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 320 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 499
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 500 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLG 189


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  263 bits (672), Expect = 7e-69
 Identities = 131/175 (74%), Positives = 140/175 (80%), Gaps = 3/175 (1%)
 Frame = +2

Query: 149 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 319
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 320 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 499
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 500 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLG 189


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  260 bits (664), Expect = 6e-68
 Identities = 128/174 (73%), Positives = 138/174 (79%), Gaps = 2/174 (1%)
 Frame = +2

Query: 149 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 322
           +Q LG R L++            F VRA +  PVK   DR LWFASKQSL+YLDGSLPGD
Sbjct: 19  RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 323 FGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 502
           +GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ 
Sbjct: 74  YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 503 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
           WF+TGV PP GTYNYWADPYTLFV EMALMGFAEHRR QD+  PGSMGKQYFLG
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLG 187


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
           mays PE=2 SV=1
          Length = 267

 Score =  258 bits (660), Expect = 2e-67
 Identities = 121/151 (80%), Positives = 130/151 (86%), Gaps = 2/151 (1%)
 Frame = +2

Query: 218 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 391
           F VRA++  P K   DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 31  FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 392 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 571
            YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91  AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 572 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
           V  MALMGFAEHRR QD+Y PGSMGKQYFLG
Sbjct: 151 VFNMALMGFAEHRRLQDWYNPGSMGKQYFLG 181


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  256 bits (653), Expect = 1e-66
 Identities = 123/151 (81%), Positives = 130/151 (86%), Gaps = 2/151 (1%)
 Frame = +2

Query: 218 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 391
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 392 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 571
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 572 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
           VLEMALMGFAEHRR QD+Y PGSMGKQYFLG
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYFLG 187


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  256 bits (653), Expect = 1e-66
 Identities = 123/151 (81%), Positives = 130/151 (86%), Gaps = 2/151 (1%)
 Frame = +2

Query: 218 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 391
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 392 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 571
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 572 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 664
           VLEMALMGFAEHRR QD+Y PGSMGKQYFLG
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYFLG 187