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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948190
Clone id TST38A01NGRL0002_K14
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_K14. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CGCCATTTCTGCAAACAAGGCTCCATGAATGCTCTTGCGGGTGATGCAGAAGGCCTGTCT
TGTCGTGTAGTTGAGGAGGAGCTGTAGCCCCTAGCGTGATGGTTGTTGTGCAAGGCGTTC
GATTCCTTTTGATGTGCATCCCGAGGATGAAGTCGGTCGTCATCTCTGTGAAGTAAGGCG
AGATTAATGATGATGCAGAAGGGCTGCGGTGTCCGGTTGTTGGGGATGCTCTAGCGCATA
GGATGCCTCATGGGAGGGTCTTTTTCACCGTGTAGTTTTTTGTGCCTACGACGTTGCTGA
GGATCTGCTATCTGGTGCTGCGAGCAATAGTGTGTGTGCTTGTATAAGAGGAGGCGGTTG
CCTCTTTCTCTCTCCATCTGACTCTGCCTCTTTGTCTCCGTATGAATGCATAATAGCATC
TAGAGTGTTGCTGCTAATGGCTTGAAACCAGGACAGTGGGAGTTCATGTGCTGGCGAAGC
GGAAGAATGATGCATTACCAATGGTGATTCTCTGGGTGCTCAGAGCATGGACTT
■■Homology search results ■■ -
sp_hit_id P13728
Definition sp|P13728|SGS3_DROYA Salivary glue protein Sgs-3 OS=Drosophila yakuba
Align length 102
Score (bit) 35.4
E-value 0.18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948190|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_K14, 5'
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13728|SGS3_DROYA Salivary glue protein Sgs-3 OS=Drosophila y...    35   0.18 
sp|Q21006|NHR34_CAEEL Nuclear hormone receptor family member nhr...    32   1.9  
sp|Q9C0D6|FHDC1_HUMAN FH2 domain-containing protein 1 OS=Homo sa...    30   5.7  
sp|Q6FB19|FDHD_ACIAD Protein fdhD homolog OS=Acinetobacter sp. (...    30   7.3  
sp|Q03320|ARACL_STRAT Putative araC-like transcription regulator...    30   7.3  
sp|Q88CF1|XERC_PSEPK Tyrosine recombinase xerC OS=Pseudomonas pu...    30   9.5  
sp|Q9N1A6|STP2_PANPA Nuclear transition protein 2 (Fragment) OS=...    30   9.5  

>sp|P13728|SGS3_DROYA Salivary glue protein Sgs-3 OS=Drosophila
           yakuba GN=Sgs3 PE=2 SV=2
          Length = 263

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
 Frame = -1

Query: 315 PDSRSSATS*AQKTTR*KRPSHEASYALEHPQQPDTAALLHHH*SRLTSQR*RPTSSSGC 136
           P +RS+ T    K+T  KRP+HE +   + P Q  T        +  T    +PT+  GC
Sbjct: 159 PTTRSTTTRHTTKSTTSKRPTHETTTTSKRPTQETTTTTRRATQATTTP---KPTNKPGC 215

Query: 135 TSK----GIERLAQQPSR*GLQLLLNYTTRQAFCITRKSIHG 22
             K    G       P R GL   LN   RQ     R+ + G
Sbjct: 216 GCKSCGPGGIPCGSCPKRQGLCTELNNLLRQLERRVRECVCG 257


>sp|Q21006|NHR34_CAEEL Nuclear hormone receptor family member nhr-34
           OS=Caenorhabditis elegans GN=nhr-34 PE=2 SV=3
          Length = 631

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 81  AVAPSVMVVVQGVRFLLMCIPRMKSVVISVK*GEINDDAEGLRCPVVGDALAHR 242
           +VAP + +V + V F+    P+ + + + +  G +  +  GL+C V GD+ A R
Sbjct: 111 SVAPPLCIVPRSVEFIN---PKTEDMSMDIPMGNVQSEFTGLKCRVCGDSRAGR 161


>sp|Q9C0D6|FHDC1_HUMAN FH2 domain-containing protein 1 OS=Homo
           sapiens GN=FHDC1 PE=2 SV=2
          Length = 1143

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 405 SYGDKEAESDGERKRQPPPLIQAHTLLLAAPDSRSSA 295
           S+  K   S G+ +   PP  QAH L  A P++ +SA
Sbjct: 597 SFAHKPQASGGQEEAPNPPSAQAHQLAAAQPENHASA 633


>sp|Q6FB19|FDHD_ACIAD Protein fdhD homolog OS=Acinetobacter sp.
           (strain ADP1) GN=fdhD PE=3 SV=1
          Length = 273

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -2

Query: 122 SNALHNNHHARGYSSSSTTR 63
           +NAL N+ HA+GY S STTR
Sbjct: 8   TNALSNDTHAQGYQSVSTTR 27


>sp|Q03320|ARACL_STRAT Putative araC-like transcription regulator
           OS=Streptomyces antibioticus PE=4 SV=1
          Length = 303

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -3

Query: 202 PSASSLISPYFTEMTTDFILGMHIKRNRTPCTTTITLGATAPPQLHDKTGLLHHPQEHSW 23
           P AS+L++ +   +    +L +H++R   P   +  L   A P +      LH    HSW
Sbjct: 159 PMASTLVAEHLAVVMLIHVLRLHLER--APDAVSGWLAGLADPVVASALTFLHRDPAHSW 216

Query: 22  SL 17
           ++
Sbjct: 217 TV 218


>sp|Q88CF1|XERC_PSEPK Tyrosine recombinase xerC OS=Pseudomonas
           putida (strain KT2440) GN=xerC PE=3 SV=1
          Length = 299

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 410 CIHTETKRQSQMERERGNRLLLYKHTHYCSQHQIADPQ 297
           C H   +RQ      +G R  L K   YC +H IAD Q
Sbjct: 9   CAHLRNERQVSEHTSQGYRRDLEKVIAYCEEHGIADWQ 46


>sp|Q9N1A6|STP2_PANPA Nuclear transition protein 2 (Fragment) OS=Pan
           paniscus GN=TNP2 PE=2 SV=1
          Length = 133

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 13/77 (16%)
 Frame = -2

Query: 404 HTETKRQSQMERERGNRLLLYKHT----------HYCSQHQIADPQQR---RRHKKLHGE 264
           H +T  QS  +  RG+R      +          H  S HQ   P      +RHKK    
Sbjct: 29  HRQTFSQSCRQSHRGSRSRSSSQSPASHRNPTGAHSSSGHQSQSPNTSPPPKRHKKTMNS 88

Query: 263 KDPPMRHPMR*SIPNNR 213
              PMR  +  S P NR
Sbjct: 89  HHSPMRPTLHCSCPKNR 105
tr_hit_id B8BVZ2
Definition tr|B8BVZ2|B8BVZ2_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335
Align length 114
Score (bit) 36.6
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948190|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_K14, 5'
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8BVZ2|B8BVZ2_THAPS Predicted protein OS=Thalassiosira pseudo...    37   0.85 
tr|A8ZSV7|A8ZSV7_DESOH Electron transport complex, RnfABCDGE typ...    36   1.1  
tr|A4HBI2|A4HBI2_LEIBR Putative uncharacterized protein OS=Leish...    36   1.1  
tr|B4PF55|B4PF55_DROYA Salivary gland secretion 3 OS=Drosophila ...    35   1.9  
tr|Q1EP18|Q1EP18_MUSBA Protein kinase family protein OS=Musa bal...    34   4.2  
tr|B4L9E6|B4L9E6_DROMO GI16834 OS=Drosophila mojavensis GN=GI168...    34   5.4  
tr|B4KUN4|B4KUN4_DROMO GI12192 OS=Drosophila mojavensis GN=GI121...    34   5.4  
tr|B4MKY7|B4MKY7_DROWI GK17261 OS=Drosophila willistoni GN=GK172...    33   7.2  
tr|B3P2W0|B3P2W0_DROER GG25249 OS=Drosophila erecta GN=GG25249 P...    33   9.2  
tr|Q4PCA3|Q4PCA3_USTMA Putative uncharacterized protein OS=Ustil...    33   9.2  
tr|B4JJ05|B4JJ05_DROGR GH11800 OS=Drosophila grimshawi GN=GH1180...    33   9.3  

>tr|B8BVZ2|B8BVZ2_THAPS Predicted protein OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_21559 PE=4 SV=1
          Length = 900

 Score = 36.6 bits (83), Expect = 0.85
 Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 12/114 (10%)
 Frame = -1

Query: 492 HHSSASPA---HELPLSWFQAIS--SNTLDAIMHSYGDKEAESDGERKRQP-PPLIQAHT 331
           HHSS  P    H   L W   I   +N   A+ H Y     ES  E    P PP+ +   
Sbjct: 7   HHSSTFPRTHPHSDTLGWSSYIGCGNNNTMALHHQYNSSGVESSPETCHPPSPPINEVGA 66

Query: 330 LLLAAPDSRSSATS*AQKTTR*KRPSHEASY------ALEHPQQPDTAALLHHH 187
           +      SRSS    +Q+  + +R   +  Y      + +   QP  +   HHH
Sbjct: 67  IKTFVHSSRSSQQWNSQRVHQQQRQEQQNDYPKIIAFSNDELDQPTQSTTHHHH 120


>tr|A8ZSV7|A8ZSV7_DESOH Electron transport complex, RnfABCDGE type,
           B subunit OS=Desulfococcus oleovorans (strain DSM 6200 /
           Hxd3) GN=Dole_0311 PE=4 SV=1
          Length = 303

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +2

Query: 203 AAVSGC-WGCSSA*DASWEGLFHRVVFCAYDVAEDLLSGAASNSVCACIRGGGCLFLSPS 379
           A V GC +GC    D         V  CAYD A  +++G A     AC+  G C    P 
Sbjct: 133 ADVQGCTYGCLGFGDC--------VEACAYD-AIHVINGLAVVDYTACVGCGACAKACPR 183

Query: 380 DSASLSPYECIIASRVLLLMA*NQDSGSSCAGEAEE*CI 496
           +  +++P++   A RV  ++  N+D+G       +  C+
Sbjct: 184 NIITMTPFK---ADRVFAVLCSNKDAGKEVKKVCDVGCL 219


>tr|A4HBI2|A4HBI2_LEIBR Putative uncharacterized protein
           OS=Leishmania braziliensis GN=LbrM20_V2.4220 PE=4 SV=1
          Length = 1189

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 24/73 (32%), Positives = 40/73 (54%)
 Frame = -1

Query: 516 PRESPLVMHHSSASPAHELPLSWFQAISSNTLDAIMHSYGDKEAESDGERKRQPPPLIQA 337
           P   PLV   SSA+P  E P++   A+S+ +  A  ++ G+ ++   GE+KR+P     A
Sbjct: 431 PTLPPLVKAESSAAPTAESPVANRGALSAESAAATANT-GESDSSPAGEKKRRPGTAAPA 489

Query: 336 HTLLLAAPDSRSS 298
            +L L+  +  SS
Sbjct: 490 ASLPLSPRNGDSS 502


>tr|B4PF55|B4PF55_DROYA Salivary gland secretion 3 OS=Drosophila
           yakuba GN=Sgs3 PE=4 SV=1
          Length = 273

 Score = 35.4 bits (80), Expect = 1.9
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
 Frame = -1

Query: 315 PDSRSSATS*AQKTTR*KRPSHEASYALEHPQQPDTAALLHHH*SRLTSQR*RPTSSSGC 136
           P +RS+ T    K+T  KRP+HE +   + P Q  T        +  T    +PT+  GC
Sbjct: 169 PTTRSTTTRQTTKSTTSKRPTHETTTTSKRPTQETTTTTRRATQATTTP---KPTNKPGC 225

Query: 135 TSK----GIERLAQQPSR*GLQLLLNYTTRQAFCITRKSIHG 22
             K    G       P R GL   LN   RQ     R+ + G
Sbjct: 226 GCKSCGPGGIPCGSCPKRQGLCTELNNLLRQLERRVRECVCG 267


>tr|Q1EP18|Q1EP18_MUSBA Protein kinase family protein OS=Musa
           balbisiana GN=MBP_91N22.78 PE=4 SV=1
          Length = 637

 Score = 34.3 bits (77), Expect = 4.2
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
 Frame = -1

Query: 516 PRESPLVMHHSSASPAHELPLSWFQAISSNTLDAIMHSYGDKEAESDGERKRQPPPLIQA 337
           P  SP   H + A P            SSN         G K  +S G+   +  P +  
Sbjct: 170 PSPSPSASHRAPADPISP---------SSNGSGIPTSDVGQKSGQSSGDGGMKAGPAVAV 220

Query: 336 HTLLLAAPDSRSSATS*AQKTTR*KRPS-HEASYALEHPQQPDTAALLHHH 187
             +          A +   +  R K P+ +E+ +A+  P Q  +A L+HHH
Sbjct: 221 ALVTAVVLLGLVGAITWIVRRKRRKPPANYESGFAMSSPYQSPSAPLVHHH 271


>tr|B4L9E6|B4L9E6_DROMO GI16834 OS=Drosophila mojavensis GN=GI16834
            PE=4 SV=1
          Length = 2687

 Score = 33.9 bits (76), Expect = 5.4
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 392  KRQSQMERERGNRLLLYKHTHYCSQHQIADPQQRRRHKKLHGEKDPPMRHPMR*SIPNNR 213
            K Q   +R + ++ +  +H     Q Q    QQ+++HK+LH       R PM  ++P+  
Sbjct: 1234 KHQQLQQRIQQHQQMQQQHQQQQQQQQQHQQQQQQQHKQLHDLLSAGPRTPMNAAMPSPS 1293

Query: 212  T-PQP 201
            T PQP
Sbjct: 1294 TVPQP 1298


>tr|B4KUN4|B4KUN4_DROMO GI12192 OS=Drosophila mojavensis GN=GI12192
           PE=4 SV=1
          Length = 425

 Score = 33.9 bits (76), Expect = 5.4
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = -2

Query: 398 ETKRQSQMERERGNRLLLYKHTHYCSQHQIADPQQRRRHKKLHGEKDPPMRHP 240
           + ++Q Q ++++  + L   H H   QHQ    QQ+++H+  H ++ P   HP
Sbjct: 153 QQQQQQQQQQQQQQQQLQQHHQHAHQQHQ---QQQQQQHQLQHQQQHPQQHHP 202


>tr|B4MKY7|B4MKY7_DROWI GK17261 OS=Drosophila willistoni GN=GK17261
           PE=4 SV=1
          Length = 899

 Score = 33.5 bits (75), Expect = 7.2
 Identities = 20/81 (24%), Positives = 34/81 (41%)
 Frame = -1

Query: 408 HSYGDKEAESDGERKRQPPPLIQAHTLLLAAPDSRSSATS*AQKTTR*KRPSHEASYALE 229
           H + ++E E D E+  +  P  Q+H    A+P+S S+        +      H      +
Sbjct: 523 HKHRERERERDKEKVERTRPKSQSH----ASPNSNSNGGGGGATASHHHHHHHHHQQQQQ 578

Query: 228 HPQQPDTAALLHHH*SRLTSQ 166
             QQP     +H+H    T+Q
Sbjct: 579 QQQQPQQQQHIHYHPQTTTNQ 599


>tr|B3P2W0|B3P2W0_DROER GG25249 OS=Drosophila erecta GN=GG25249 PE=4
           SV=1
          Length = 941

 Score = 33.1 bits (74), Expect = 9.2
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = -2

Query: 464 NSHCPGFKP-LAATL*MLLCIHTETKRQSQMERERGNRLLLYKHTHYCSQH-----QIAD 303
           N + P   P  AA    +  +H + ++Q Q ++++  +    +  H+  QH     Q   
Sbjct: 719 NGYWPKVSPDSAAAANAMEVMHQQQQQQQQQQQQQQQQQQQQQAHHHHPQHGVPPQQHVP 778

Query: 302 PQQRRRHKKLHGEKDPPMRHPM 237
           PQQ+++ +  H ++ PP +H M
Sbjct: 779 PQQQQQQQHHHPQQQPPPQHSM 800


>tr|Q4PCA3|Q4PCA3_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM02260.1 PE=4 SV=1
          Length = 1929

 Score = 33.1 bits (74), Expect = 9.2
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 107 NNHHARGYSSSSTTRQDRPSASP-ARAFMEPCL 12
           NNHHAR + S+  TR  +PS++P  R F  P +
Sbjct: 154 NNHHARTHPSNDGTRTPKPSSTPKGRPFASPII 186