DK948191
Clone id TST38A01NGRL0002_K15
Library
Length 682
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_K15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CTCTAGACCGGCAGTAGCAATGGCGAGCTCTGTGGCTTCTTTGGCAGTTTCTGCTCCCTC
GTGCGCCCCGGCAGAGAGCCTATCTAAGAGCTTCTCCGGCCTCAGGCCCACTACCCTCGC
TGCCCCCAAGAGCGCCAACCCGCTCTCCATCTCCAACGGCAGCCGCGTGAGCGCCATGCT
TGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGAC
AAGCGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGGAAGGGCTGGACCCCCTGCAT
TGAGTTCGACAAAATCGGAAGCGTATACCGAGAGCACTTCCATGGCAGCGGCTACTACGA
TGGGCGATACTGGGTGATGTGGAAGTTGCCCATGTTTGGCTGCCAAGATGCCGCCGCTGT
GCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTACCCCGAAGCCTTCATCCGCGTGCTGGG
CTTTGACGCCAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCTA
GAAATCAATGATTTATCCTCGGAGACAACGACNATGCGTTCGTAGCCCTTTTTTCTCTCA
AGGAGACCTTGTGAACATACACTTTTGTAACGATGAGGCACATCACCAAATTTTAATTCA
TCTCTGTTAAGAGCCTTGTTTC
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 158
Score (bit) 184.0
E-value 4.0e-46
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948191|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_K15, 5'
(682 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 184 4e-46
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 182 1e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 182 2e-45
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 181 3e-45
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 181 4e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 179 9e-45
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 179 1e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 179 1e-44
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 179 2e-44
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 179 2e-44
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 179 2e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 178 2e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 178 3e-44
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 178 3e-44
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 177 4e-44
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 177 6e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 176 8e-44
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 176 8e-44
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 176 1e-43
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 176 1e-43
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 175 2e-43
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 175 2e-43
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha... 175 2e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 175 2e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 174 3e-43
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha... 174 3e-43
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha... 174 3e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 174 4e-43

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 184 bits (467), Expect = 4e-46
Identities = 88/158 (55%), Positives = 110/158 (69%), Gaps = 6/158 (3%)
Frame = +2

Query: 77 SLSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLT 241
SL+ F+GL+ P T A + L SNG RV M VW P KK+ETLSYLPPL+
Sbjct: 21 SLAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLS 79

Query: 242 SEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 418
E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLPMFGC D+A
Sbjct: 80 DEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQ 139

Query: 419 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 532
V++E+ EC KEYP AFIRV+GFD RQVQ F+V KP
Sbjct: 140 VMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 182 bits (463), Expect = 1e-45
Identities = 89/157 (56%), Positives = 108/157 (68%), Gaps = 4/157 (2%)
Frame = +2

Query: 77 SLSKSFSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTS 244
S+ F+GLR + A K+ N LS SNG RVS M VW P KKFETLSYLPPL+
Sbjct: 21 SMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSV 80

Query: 245 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 424
E +AK+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+
Sbjct: 81 EDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVI 140

Query: 425 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
E+ E K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 141 AEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 182 bits (461), Expect = 2e-45
Identities = 88/152 (57%), Positives = 106/152 (69%), Gaps = 4/152 (2%)
Frame = +2

Query: 92 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 259
F+GLR + A K+ N LS SNG RVS M VW P KKFETLSYLPPL+ E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 260 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 439
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 440 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 181 bits (459), Expect = 3e-45
Identities = 79/127 (62%), Positives = 96/127 (75%)
Frame = +2

Query: 152 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 331
SNG RV M VW P KKFETLSYLPPLT EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49 SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 332 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 511
E+ + GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD RQVQ
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCI 168

Query: 512 GFLVQKP 532
FL KP
Sbjct: 169 SFLTYKP 175


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
Length = 177

Score = 181 bits (458), Expect = 4e-45
Identities = 87/153 (56%), Positives = 106/153 (69%), Gaps = 5/153 (3%)
Frame = +2

Query: 92 FSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIA 256
F+GLR P T A K+ + L SNG +VS M VW P KKFETLSYLPPL+ E +A
Sbjct: 26 FNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 84

Query: 257 KQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 436
K+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+
Sbjct: 85 KEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVE 144

Query: 437 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
E K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 145 EAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 179 bits (455), Expect = 9e-45
Identities = 81/128 (63%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Frame = +2

Query: 152 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 328
SNG RV M VW P KKFETLSYLPPL+SEQ+AK+VD+++RK PC+EF+ + G VY
Sbjct: 52 SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 329 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 508
REH GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171

Query: 509 SGFLVQKP 532
F+ KP
Sbjct: 172 ISFIAYKP 179


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
Length = 178

Score = 179 bits (454), Expect = 1e-44
Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 4/158 (2%)
Frame = +2

Query: 77 SLSKSFSGLRPTT-LAAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSE 247
+L+ F+GL+ + K N ++ SNGSRV+ M VW P KKFETLSYLPPLT E
Sbjct: 20 NLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDE 79

Query: 248 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 424
Q+ K+V++++RKGW PC+EF+ + G V+R++ GYYDGRYW MW+LP+FG DAA VL
Sbjct: 80 QLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVL 139

Query: 425 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPSV 538
+E+AEC EYPEAFIR++GFD RQVQ F+ P V
Sbjct: 140 KEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
PE=1 SV=2
Length = 180

Score = 179 bits (454), Expect = 1e-44
Identities = 84/152 (55%), Positives = 108/152 (71%), Gaps = 5/152 (3%)
Frame = +2

Query: 92 FSGLRPTTL--AAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 259
F+GL+ + A K+ N ++ SNG RV+ M VW P KKFETLSYLP LT ++AK
Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 260 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 436
+VD+++R W PC+EF+ + G VYREH + GYYDGRYW MWKLP+FGC D+A VL+E+
Sbjct: 84 EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 437 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 532
EC KEYP AFIR++GFD RQVQ F+ KP
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 174

Score = 179 bits (453), Expect = 2e-44
Identities = 80/150 (53%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Frame = +2

Query: 92 FSGLRPTT---LAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 262
F GL+ T ++ +A+ S+SNG R+ M VW KKFETLSYLPPL++E + KQ
Sbjct: 16 FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75

Query: 263 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 442
VD+++R W PC+EF K+G ++REH GYYDGRYW MWKLPMFGC DA VL E+ E
Sbjct: 76 VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135

Query: 443 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 532
KEYP+A++R++GFD RQVQ F+ KP
Sbjct: 136 KKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
Length = 178

Score = 179 bits (453), Expect = 2e-44
Identities = 88/155 (56%), Positives = 110/155 (70%), Gaps = 8/155 (5%)
Frame = +2

Query: 92 FSGLR-----PTTLAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 250
F+GL+ PTT K AN S SNG RV M VW P KK+ETLSYLPPLT Q
Sbjct: 25 FTGLKSNAAFPTT----KKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQ 80

Query: 251 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 427
+AK+VD+++RK W PC+EF+ + G VYRE+ GYYDGRYW MWKLPMFGC D+A V++
Sbjct: 81 LAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140

Query: 428 EIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 532
E+AEC KEYP+A+IR++GFD RQVQ F+ +P
Sbjct: 141 ELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRP 175


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 154
Score (bit) 288.0
E-value 2.0e-76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948191|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_K15, 5'
(682 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 288 2e-76
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 203 9e-51
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 202 2e-50
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 199 1e-49
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 197 4e-49
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 195 3e-48
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 195 3e-48
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 186 9e-46
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 186 2e-45
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 185 2e-45
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 185 2e-45
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 184 6e-45
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 183 8e-45
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 182 1e-44
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 182 2e-44
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 182 2e-44
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 182 2e-44
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 181 5e-44
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 180 7e-44
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 180 7e-44
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c... 179 2e-43
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c... 179 2e-43
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t... 179 2e-43
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 178 2e-43
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c... 178 3e-43

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 288 bits (738), Expect = 2e-76
Identities = 134/154 (87%), Positives = 146/154 (94%)
Frame = +2

Query: 74 ESLSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQI 253
ESLSKSFSGL+ TL APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLPPLT++QI
Sbjct: 20 ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79

Query: 254 AKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREI 433
AKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREI
Sbjct: 80 AKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREI 139

Query: 434 AECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
AECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 140 AECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 203 bits (516), Expect = 9e-51
Identities = 95/153 (62%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Frame = +2

Query: 86 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 265
K FSGL+ TTL+A K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 266 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 436
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 437 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
EC + +P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 202 bits (513), Expect = 2e-50
Identities = 95/153 (62%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Frame = +2

Query: 86 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 265
K FSGL+ TTL A K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 266 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 436
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 437 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
EC + +P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 199 bits (506), Expect = 1e-49
Identities = 91/153 (59%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Frame = +2

Query: 86 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 265
K+FSGL+P TL + K+ ++ NGSRV M VW P KFET SYLPPLT +QIAKQV
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 266 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 436
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 437 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
EC ++P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 197 bits (502), Expect = 4e-49
Identities = 91/153 (59%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Frame = +2

Query: 86 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 265
K+FSGL+ TL + K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 266 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 436
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 437 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
EC ++P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 195 bits (495), Expect = 3e-48
Identities = 90/153 (58%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
Frame = +2

Query: 86 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 265
K+FSGL+ TL KS S+ NGSRV M VW P KFET SYLPPL+ +QIA+QV
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 266 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 436
D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 437 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
EC YP ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 195 bits (495), Expect = 3e-48
Identities = 89/153 (58%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Frame = +2

Query: 86 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 265
K+FSGL+ TL + ++ S+ NGSRV M VW P KFET SYLPPLT ++IAKQV
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 266 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 436
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 437 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
EC ++P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
chain OS=Lactuca sativa PE=2 SV=1
Length = 181

Score = 186 bits (473), Expect = 9e-46
Identities = 88/158 (55%), Positives = 111/158 (70%), Gaps = 6/158 (3%)
Frame = +2

Query: 77 SLSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLT 241
SL+ F+GL+ P T A + L SNG RV M VW P KK+ETLSYLPPL+
Sbjct: 21 SLAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLS 79

Query: 242 SEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 418
E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLPMFGC D+A
Sbjct: 80 DEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQ 139

Query: 419 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 532
V++E+ EC KEYP AFIRV+GFD+ RQVQ F+V KP
Sbjct: 140 VMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_115069 PE=3 SV=1
Length = 181

Score = 186 bits (471), Expect = 2e-45
Identities = 85/150 (56%), Positives = 107/150 (71%)
Frame = +2

Query: 86 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 265
K+FSGL+ T+ + K+ N S+ NGSRV M VW P KFET SYLPPL+ + IAKQV
Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 266 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 445
++M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD+A VLREI EC
Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 446 KEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
K +P F+RVLGFD +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146969 PE=3 SV=1
Length = 181

Score = 185 bits (470), Expect = 2e-45
Identities = 86/150 (57%), Positives = 107/150 (71%)
Frame = +2

Query: 86 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 265
K+FSGL+ +TL + K+ + S+ NGSRV M VW P KFET SYLPPL+ + IAKQV
Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 266 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 445
D+M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD A VLREI EC
Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 446 KEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 535
K +P F+RVLGFD +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181