DK948193 |
Clone id |
TST38A01NGRL0002_K17 |
Library |
TST38 |
Length |
709 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_K17. 5' end sequence. |
Accession |
DK948193 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL292Contig1 |
Sequence |
GTCGTCTGCAACATTACCAAAGATCGCCATCGCCCAAAACTAAGTGTTGCTGCAGCAGAG GTTTTGCCCTCCTCTTGGAATACTACATGCATCGGGACAATGGATTTGTGGTGATCTCTA GGGTTCGCACTTCATGGAAAACCTGGCTGCGATGCCACACTTCGTCACAAAAAATATGGA ACCTGATTTTCTTGGCCTAGGGTTGTCGCTTCCCCCGCTTTCATGGTTGGATGTTCGGGT CTTTTATGTGAGGCTGAGCTGCTGCTCACTTGATGATGCACCGGACACTCTGACAATTAA ATTTGGTCCCAGGCCTATTGCCTGCACCTTTGAAATCAACGGATGCAAAGTTCCTGCCTC AGAGGAGCCCATCTCCACTCTTCGCAGGGACAGAGTCGACAGAGAATCTTCTGAGGTTAC CTATGTTGGAACGGATAGACTTCGCACCACAGGTTCATTGTCCTTTGAAGTTTGTCATAA AGAAGAAACCCTTATTTGTGGAGCTATGGAAAATACAGAGGTATGGCTAGATGGACAAGG TATTGGCAGGATTGGTGCTGTTGGTACCCTTAACAAAAGGTACAAAGCAGAGTGGGTTAT GGAGTGTAAGTGTGCCATCTCATCAGCATCATGCATTTTCTTGAAGAGACGAGTGGACCC AATGAATGTGAGTTTGGCTGTACCTTCGATGGAGGTCTATGTCGCTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NWH1 |
Definition |
sp|Q6NWH1|WDR32_DANRE WD repeat-containing protein 32 OS=Danio rerio |
Align length |
113 |
Score (bit) |
36.2 |
E-value |
0.18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SBR1 |
Definition |
tr|A9SBR1|A9SBR1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
162 |
Score (bit) |
168.0 |
E-value |
3.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948193|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_K17, 5' (709 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SBR1|A9SBR1_PHYPA Predicted protein OS=Physcomitrella paten... 168 3e-40 tr|A9NUE2|A9NUE2_PICSI Putative uncharacterized protein OS=Picea... 140 8e-32 tr|A9T096|A9T096_PHYPA Predicted protein OS=Physcomitrella paten... 135 3e-30 tr|Q8L9M0|Q8L9M0_ARATH Putative uncharacterized protein OS=Arabi... 115 4e-24 tr|Q9LMM9|Q9LMM9_ARATH F22L4.6 protein OS=Arabidopsis thaliana G... 114 5e-24 tr|Q8GUH2|Q8GUH2_ARATH Expressed protein (Putative uncharacteriz... 114 5e-24 tr|O23703|O23703_ARATH Putative uncharacterized protein OS=Arabi... 113 1e-23 tr|O03988|O03988_ARATH Putative uncharacterized protein (Fragmen... 108 3e-22 tr|A9P1C5|A9P1C5_PICSI Putative uncharacterized protein OS=Picea... 106 1e-21 tr|A7PZJ0|A7PZJ0_VITVI Chromosome chr15 scaffold_40, whole genom... 106 2e-21 tr|Q9LN54|Q9LN54_ARATH F18O14.16 OS=Arabidopsis thaliana PE=4 SV=1 103 1e-20 tr|Q8VYC6|Q8VYC6_ARATH Putative uncharacterized protein At1g1940... 103 1e-20 tr|A7P916|A7P916_VITVI Chromosome chr3 scaffold_8, whole genome ... 96 3e-18 tr|B7FIE6|B7FIE6_MEDTR Putative uncharacterized protein (Fragmen... 95 4e-18 tr|Q8LEK6|Q8LEK6_ARATH Putative uncharacterized protein OS=Arabi... 94 7e-18 tr|Q9FRK9|Q9FRK9_ARATH Putative uncharacterized protein F22H5.9 ... 94 9e-18 tr|Q8H0Z2|Q8H0Z2_ARATH Putative uncharacterized protein At1g7518... 94 9e-18 tr|Q8VXX6|Q8VXX6_ARATH Putative uncharacterized protein At1g7518... 93 1e-17 tr|A5B6C8|A5B6C8_VITVI Putative uncharacterized protein OS=Vitis... 93 1e-17 tr|Q8H8N0|Q8H8N0_ORYSJ Putative uncharacterized protein OSJNBa00... 93 2e-17 tr|Q10DL9|Q10DL9_ORYSJ Os03g0775600 protein OS=Oryza sativa subs... 93 2e-17 tr|Q10DL7|Q10DL7_ORYSJ cDNA clone:002-102-B02, full insert seque... 93 2e-17 tr|B8AKK9|B8AKK9_ORYSI Putative uncharacterized protein OS=Oryza... 93 2e-17 tr|B7FIZ3|B7FIZ3_MEDTR Putative uncharacterized protein (Fragmen... 91 7e-17 tr|A9U3I7|A9U3I7_PHYPA Predicted protein OS=Physcomitrella paten... 87 8e-16 tr|A7NTC9|A7NTC9_VITVI Chromosome chr18 scaffold_1, whole genome... 85 4e-15 tr|B6TBZ5|B6TBZ5_MAIZE Putative uncharacterized protein OS=Zea m... 72 5e-11 tr|B4FXF3|B4FXF3_MAIZE Putative uncharacterized protein OS=Zea m... 71 8e-11 tr|Q8L654|Q8L654_ORYSJ Putative uncharacterized protein OJ1203D0... 54 8e-06 tr|Q10PM9|Q10PM9_ORYSJ Os03g0228200 protein OS=Oryza sativa subs... 54 8e-06
>tr|A9SBR1|A9SBR1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_127192 PE=4 SV=1 Length = 316
Score = 168 bits (426), Expect = 3e-40 Identities = 83/162 (51%), Positives = 106/162 (65%) Frame = +2
Query: 224 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 403 W DVRV YVR++ C LDDAP++LTI+F R I E+NG ++ SEE L+RDRVD Sbjct: 25 WFDVRVIYVRVTECPLDDAPESLTIRFPARSIGTALEVNGARISPSEEVCLVLKRDRVDT 84
Query: 404 ESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTEVWLDGQGIGRIGAVGTLNKRY 583 +SSE TY+ TD LRT+GSL FEV HKEE L+CGA+E ++ D + A+ T K Sbjct: 85 DSSEATYLSTDNLRTSGSLKFEVLHKEEVLLCGALEQSQPAADAEEYKGSEAISTPEKTT 144
Query: 584 KAEWVMECKCAISSASCIFLKRRVDPMNVSLAVPSMEVYVAG 709 K W MEC CA+ + C+FLK R D +V+LA P MEV V G Sbjct: 145 KLGWTMECACAVGQSGCVFLKGRHDYPSVALAHPVMEVCVVG 186
>tr|A9NUE2|A9NUE2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 324
Score = 140 bits (353), Expect = 8e-32 Identities = 75/163 (46%), Positives = 98/163 (60%), Gaps = 1/163 (0%) Frame = +2
Query: 224 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 403 W +VR+FYVR+S C L+ AP +LT++ R + EING ++P +E TLRRDRVD+ Sbjct: 40 WFEVRLFYVRVSSCPLEGAPQSLTLRHHHRTVGVALEINGTRIPPAESVSLTLRRDRVDK 99
Query: 404 ESSEVTYVGTDRLRTTGSLSFEVCHKEET-LICGAMENTEVWLDGQGIGRIGAVGTLNKR 580 ES+E TYV TD +RTTG+L FEVC+ EET L+CGA+E E D QG+ Sbjct: 100 ESAEATYVSTDSVRTTGTLDFEVCYDEETLLLCGALERLEQGSDHQGV------------ 147
Query: 581 YKAEWVMECKCAISSASCIFLKRRVDPMNVSLAVPSMEVYVAG 709 K W M+C AI C F K + S P++EVYVAG Sbjct: 148 -KELWGMDCCSAIGPGVCPFGKLGKQQQDFSSGPPTLEVYVAG 189
>tr|A9T096|A9T096_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_138294 PE=4 SV=1 Length = 303
Score = 135 bits (339), Expect = 3e-30 Identities = 70/162 (43%), Positives = 99/162 (61%) Frame = +2
Query: 224 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 403 W DVRV YVR++ CS ++ PD+LTI+F PR I T E+NG + +EE LRRDRVD Sbjct: 19 WFDVRVIYVRITGCSPEEDPDSLTIRFPPRTIGVTLEVNGGWISPTEESCVVLRRDRVDS 78
Query: 404 ESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTEVWLDGQGIGRIGAVGTLNKRY 583 E++E TYV TD LR G++ +EV +KEE ++ G +E+ E L+ G+ +K+ Sbjct: 79 ETAEATYVSTDNLRICGTICYEVVNKEEVIVSGTLEHVENCLELIH----GSKECFSKKD 134
Query: 584 KAEWVMECKCAISSASCIFLKRRVDPMNVSLAVPSMEVYVAG 709 W MEC+C ++ C F K R D + SL P+MEV + G Sbjct: 135 DQAWAMECRCVAGNSGCFFNKSRQD-FSASLLPPTMEVSMVG 175
>tr|Q8L9M0|Q8L9M0_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 327
Score = 115 bits (287), Expect = 4e-24 Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 7/191 (3%) Frame = +2
Query: 158 HFVTKNMEPDFXXXXXXXXXXXWLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEI 337 H T + P WL+VR+FYVR++ C +++ PD LT++ R + E+ Sbjct: 20 HMNTSTVSPPSPASSISLSQSAWLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEV 79
Query: 338 NGCKVPASEEPISTLRRDRVDRESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENT 517 NG +VP+S+ LRRDRVDRESSEVTYV T+ +R TG + FEV E+ ++CG ++ Sbjct: 80 NGVRVPSSQTASLKLRRDRVDRESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRI 139
Query: 518 EVWLDGQGIGRIGAVGTLNKRYKAEWVMECKCAIS-------SASCIFLKRRVDPMNVSL 676 E G G V K W M+C A+ SAS F + + Sbjct: 140 E------GAWNNGTVSD----PKTGWGMDCYIAMGNGHVSGPSASAFFQPK------FGV 183
Query: 677 AVPSMEVYVAG 709 + PS+EVY+AG Sbjct: 184 SSPSVEVYIAG 194
>tr|Q9LMM9|Q9LMM9_ARATH F22L4.6 protein OS=Arabidopsis thaliana GN=F22L4.6 PE=4 SV=1 Length = 1284
Score = 114 bits (286), Expect = 5e-24 Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 7/191 (3%) Frame = +2
Query: 158 HFVTKNMEPDFXXXXXXXXXXXWLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEI 337 H T + P WL+VR+FYVR++ C +++ PD LT++ R + E+ Sbjct: 20 HMNTSTVSPPSPASSISLSQSAWLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEV 79
Query: 338 NGCKVPASEEPISTLRRDRVDRESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENT 517 NG +VP+S+ LRRDRVDRESSEVTYV T+ +R TG + FEV E+ ++CG ++ Sbjct: 80 NGVRVPSSQTASLKLRRDRVDRESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRI 139
Query: 518 EVWLDGQGIGRIGAVGTLNKRYKAEWVMECKCAIS-------SASCIFLKRRVDPMNVSL 676 E G G V K W M+C A+ SAS F + + Sbjct: 140 E------GAWNNGTVSD----PKTGWGMDCYIAMGNGHVSGPSASVFFQPK------FGV 183
Query: 677 AVPSMEVYVAG 709 + PS+EVY+AG Sbjct: 184 SSPSVEVYIAG 194
>tr|Q8GUH2|Q8GUH2_ARATH Expressed protein (Putative uncharacterized protein At1g01500) (At1g01500) OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=1 Length = 327
Score = 114 bits (286), Expect = 5e-24 Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 7/191 (3%) Frame = +2
Query: 158 HFVTKNMEPDFXXXXXXXXXXXWLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEI 337 H T + P WL+VR+FYVR++ C +++ PD LT++ R + E+ Sbjct: 20 HMNTSTVSPPSPASSISLSQSAWLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEV 79
Query: 338 NGCKVPASEEPISTLRRDRVDRESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENT 517 NG +VP+S+ LRRDRVDRESSEVTYV T+ +R TG + FEV E+ ++CG ++ Sbjct: 80 NGVRVPSSQTASLKLRRDRVDRESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRI 139
Query: 518 EVWLDGQGIGRIGAVGTLNKRYKAEWVMECKCAIS-------SASCIFLKRRVDPMNVSL 676 E G G V K W M+C A+ SAS F + + Sbjct: 140 E------GAWNNGTVSD----PKTGWGMDCYIAMGNGHVSGPSASVFFQPK------FGV 183
Query: 677 AVPSMEVYVAG 709 + PS+EVY+AG Sbjct: 184 SSPSVEVYIAG 194
>tr|O23703|O23703_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 311
Score = 113 bits (282), Expect = 1e-23 Identities = 66/169 (39%), Positives = 95/169 (56%), Gaps = 7/169 (4%) Frame = +2
Query: 224 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 403 WL+VR+FYVR++ C +++ PD LT++ R + E+NG +VP+S+ LRRDRVDR Sbjct: 22 WLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEVNGVRVPSSQTASLKLRRDRVDR 81
Query: 404 ESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTEVWLDGQGIGRIGAVGTLNKRY 583 ESSEVTYV T+ +R TG + FEV E+ ++CG ++ E G G V Sbjct: 82 ESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRIE------GAWNNGTVSD----P 131
Query: 584 KAEWVMECKCAIS-------SASCIFLKRRVDPMNVSLAVPSMEVYVAG 709 K W M+C A+ SAS F + ++ PS+EVY+AG Sbjct: 132 KTGWGMDCYIAMGNGHVSGPSASVFFQPK------FGVSSPSVEVYIAG 174
>tr|O03988|O03988_ARATH Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=2 SV=1 Length = 277
Score = 108 bits (271), Expect = 3e-22 Identities = 65/168 (38%), Positives = 94/168 (55%), Gaps = 7/168 (4%) Frame = +2
Query: 227 LDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDRE 406 L+VR+FYVR++ C +++ PD LT++ R + E+NG +VP+S+ LRRDRVDRE Sbjct: 1 LEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEVNGVRVPSSQTASLKLRRDRVDRE 60
Query: 407 SSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTEVWLDGQGIGRIGAVGTLNKRYK 586 SSEVTYV T+ +R TG + FEV E+ ++CG ++ E G G V K Sbjct: 61 SSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRIE------GAWNNGTVSD----PK 110
Query: 587 AEWVMECKCAIS-------SASCIFLKRRVDPMNVSLAVPSMEVYVAG 709 W M+C A+ SAS F + ++ PS+EVY+AG Sbjct: 111 TGWGMDCYIAMGNGHVSGPSASVFFQPK------FGVSSPSVEVYIAG 152
>tr|A9P1C5|A9P1C5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 309
Score = 106 bits (265), Expect = 1e-21 Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 2/164 (1%) Frame = +2
Query: 224 WLDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDR 403 W D++VFY+++ C D AP +LT+ + PR + EING ++ S TLRR+ +D Sbjct: 25 WFDIKVFYIKIDACGFDPAPGSLTVHYAPRSSSTELEINGKRIRPSASAFLTLRRNGIDE 84
Query: 404 ESSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTEVWLDGQGIGRIGAV--GTLNK 577 +S TYV TD RTTG + F+VC +EETLICG +E R G+V + + Sbjct: 85 NASVATYVSTDVTRTTGKVCFDVCVREETLICGTLE------------RKGSVKYDDVTQ 132
Query: 578 RYKAEWVMECKCAISSASCIFLKRRVDPMNVSLAVPSMEVYVAG 709 + W ++ CA+ S K N++ PS+E+Y+AG Sbjct: 133 LRQPSWTVDFCCALDYPS----KWSSTKPNIN-KFPSLELYIAG 171
>tr|A7PZJ0|A7PZJ0_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026897001 PE=4 SV=1 Length = 266
Score = 106 bits (264), Expect = 2e-21 Identities = 52/105 (49%), Positives = 72/105 (68%), Gaps = 1/105 (0%) Frame = +2
Query: 227 LDVRVFYVRLSCCSLDDAPDTLTIKFGPRPIACTFEINGCKVPASEEPISTLRRDRVDRE 406 L++R+FYVR++ C +D PD LT+ R I + EING ++PASE TLRRDR+D+E Sbjct: 37 LEIRLFYVRIAPCVIDSVPDHLTLCHIRRGIGVSLEINGARIPASETASLTLRRDRLDKE 96
Query: 407 SSEVTYVGTDRLRTTGSLSFEVCHKEETLICGAMENTE-VWLDGQ 538 SSEV YV TD +R G + FEV KEE ++CG++E E W +G+ Sbjct: 97 SSEVIYVSTDSVRVAGGVEFEVYEKEEMILCGSLERMESSWGNGK 141
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