DK948204 |
Clone id |
TST38A01NGRL0002_L05 |
Library |
TST38 |
Length |
400 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_L05. 5' end sequence. |
Accession |
DK948204 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL69Contig1 |
Sequence |
TGATCCTGAGCATGCCAAGAAGCTTGCCTCTGTAGCTGATCTCTATGTCAATGATGCCTT TGGTACAGCTCACCGAGCTCATGCCTCTACTGAGGGTGTGACCAAGTATTTGAGCCCCTC AGTGGCTGGTTTTCTACTTCAAAAGGAACTTGATTATTTGGATGGGGCTGTGTCCAACCC AACACACCCTTTTGCTGCAATTGTTGGAGGCTCCTAAGTGTCTTCTAAGATTGGTGTCAT TGAGTCTTTGCTGGAAAAATGTGATATCTTGGTGCTTGGTGGAGGTATGATTTTCACTTT CTACAATGCACAAGGTCTTGCTGACAGATCTTCTTTGGTCTAGGCGGATAAAGCTCGAGC TAGCAACCTTTCTTATGGATAAAGCGAAAGCAAAGGGAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P12782 |
Definition |
sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum |
Align length |
132 |
Score (bit) |
172.0 |
E-value |
4.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948204|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_L05, 5' (400 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=T... 172 4e-43 sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fra... 169 5e-42 sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=N... 168 7e-42 sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=A... 167 1e-41 sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicot... 159 1e-40 sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triti... 164 2e-40 sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=V... 159 4e-39 sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=C... 157 2e-38 sp|Q10Z46|PGK_TRIEI Phosphoglycerate kinase OS=Trichodesmium ery... 150 2e-36 sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabil... 147 2e-35 sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (str... 147 2e-35 sp|B0JT86|PGK_MICAN Phosphoglycerate kinase OS=Microcystis aerug... 146 3e-35 sp|A8G2K1|PGK_PROM2 Phosphoglycerate kinase OS=Prochlorococcus m... 142 5e-34 sp|Q2JXF0|PGK_SYNJA Phosphoglycerate kinase OS=Synechococcus sp.... 140 6e-34 sp|Q31P73|PGK_SYNE7 Phosphoglycerate kinase OS=Synechococcus elo... 142 7e-34 sp|Q7VDZ4|PGK_PROMA Phosphoglycerate kinase OS=Prochlorococcus m... 142 7e-34 sp|Q31CY6|PGK_PROM9 Phosphoglycerate kinase OS=Prochlorococcus m... 142 7e-34 sp|B0CD95|PGK_ACAM1 Phosphoglycerate kinase OS=Acaryochloris mar... 142 7e-34 sp|A2BNZ0|PGK_PROMS Phosphoglycerate kinase OS=Prochlorococcus m... 141 1e-33 sp|A3PAR3|PGK_PROM0 Phosphoglycerate kinase OS=Prochlorococcus m... 141 1e-33 sp|Q0I6M5|PGK_SYNS3 Phosphoglycerate kinase OS=Synechococcus sp.... 140 1e-33 sp|Q46HH8|PGK_PROMT Phosphoglycerate kinase OS=Prochlorococcus m... 140 1e-33 sp|A2C025|PGK_PROM1 Phosphoglycerate kinase OS=Prochlorococcus m... 140 2e-33 sp|Q5N4Z6|PGK_SYNP6 Phosphoglycerate kinase OS=Synechococcus sp.... 140 3e-33 sp|Q3AVX6|PGK_SYNS9 Phosphoglycerate kinase OS=Synechococcus sp.... 139 3e-33 sp|A5GW73|PGK_SYNR3 Phosphoglycerate kinase OS=Synechococcus sp.... 138 7e-33 sp|P74421|PGK_SYNY3 Phosphoglycerate kinase OS=Synechocystis sp.... 138 1e-32 sp|Q8DGP7|PGK_THEEB Phosphoglycerate kinase OS=Thermosynechococc... 137 2e-32 sp|Q2JKX6|PGK_SYNJB Phosphoglycerate kinase OS=Synechococcus sp.... 137 2e-32 sp|Q7V390|PGK_PROMP Phosphoglycerate kinase OS=Prochlorococcus m... 136 3e-32
>sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1 Length = 480
Score = 172 bits (437), Expect = 4e-43 Identities = 91/132 (68%), Positives = 100/132 (75%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 DPE AKKLAS+ADL+VNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDYLDGAVSNP Sbjct: 202 DPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNP 261
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADKARA 361 PFAA ESLLEKCDIL+LGGGMIFTFY AQGL+ SSLV DK Sbjct: 262 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLEL 321
Query: 362 SNLSYG*SESKG 397 + +++KG Sbjct: 322 ATSLLAKAKAKG 333
>sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2 Length = 433
Score = 169 bits (427), Expect = 5e-42 Identities = 90/132 (68%), Positives = 98/132 (74%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 DPE AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDYL GAVSNP Sbjct: 158 DPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNP 217
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADKARA 361 PFAA ESLLEKCDIL+LGGGMIFTFY AQG++ SSLV DK Sbjct: 218 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGMSVGSSLVEEDKLDL 277
Query: 362 SNLSYG*SESKG 397 + ++ KG Sbjct: 278 ATSLLAKAKEKG 289
>sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 481
Score = 168 bits (426), Expect = 7e-42 Identities = 90/132 (68%), Positives = 99/132 (75%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 +PE AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDYL GAVSNP Sbjct: 205 EPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNP 264
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADKARA 361 PFAA ESLLEKCDIL+LGGGMIFTFY AQGL+ SSLV DK Sbjct: 265 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLEL 324
Query: 362 SNLSYG*SESKG 397 + +++KG Sbjct: 325 ATSLLEKAKAKG 336
>sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2 Length = 478
Score = 167 bits (424), Expect = 1e-41 Identities = 89/132 (67%), Positives = 99/132 (75%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 +P+ AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDYL GAVSNP Sbjct: 203 EPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNP 262
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADKARA 361 PFAA ESLLEKCDIL+LGGGMIFTFY AQGL+ SSLV DK Sbjct: 263 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLEL 322
Query: 362 SNLSYG*SESKG 397 + +++KG Sbjct: 323 ATELLAKAKAKG 334
>sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1 Length = 401
Score = 159 bits (401), Expect(2) = 1e-40 Identities = 83/117 (70%), Positives = 90/117 (76%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 +PE AKKLAS+ADLYVNDAFGTAHRAHASTEGV KYL P+VAGFL+QKELDYL GAV+NP Sbjct: 131 EPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPAVAGFLMQKELDYLVGAVANP 190
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADK 352 PFAA ESLLEK D+L+LGGGMIFTFY AQG A SSLV DK Sbjct: 191 QKPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYAVGSSLVEEDK 247
Score = 28.5 bits (62), Expect(2) = 1e-40 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = +3
Query: 351 KLELATFLMDKAKAKG 398 KL+LAT LM+KAKAKG Sbjct: 247 KLDLATSLMEKAKAKG 262
>sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1 Length = 401
Score = 164 bits (414), Expect = 2e-40 Identities = 89/132 (67%), Positives = 96/132 (72%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 DPE AKKLASVADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFL+QKELDYL GAV+NP Sbjct: 131 DPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYLVGAVANP 190
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADKARA 361 PFAA ESLL K DIL+LGGGMIFTFY AQGLA SLV DK Sbjct: 191 KKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLEL 250
Query: 362 SNLSYG*SESKG 397 + ++SKG Sbjct: 251 ATSLIETAKSKG 262
>sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1 Length = 462
Score = 159 bits (402), Expect = 4e-39 Identities = 84/132 (63%), Positives = 94/132 (71%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 DPE AKKLAS ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDYLDGAVS P Sbjct: 192 DPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSAP 251
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADKARA 361 PF A E L+EKCD +++GGGMIFTFY A+GL SSLV DK Sbjct: 252 KRPFVAIVGGSKVSSKITVIEKLMEKCDKIIIGGGMIFTFYKARGLKVGSSLVEEDKLEL 311
Query: 362 SNLSYG*SESKG 397 + +++KG Sbjct: 312 AKNLEAIAKAKG 323
>sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1 Length = 461
Score = 157 bits (396), Expect = 2e-38 Identities = 82/132 (62%), Positives = 95/132 (71%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 +PE AKKLA+ ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDYLDGAVSNP Sbjct: 191 EPEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNP 250
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADKARA 361 PF A E+L+EKCD +++GGGMIFTFY A+ L SSLV DK Sbjct: 251 KRPFVAIVGGSKVSSKITVIEALMEKCDKIIIGGGMIFTFYKARALKVGSSLVEDDKIEL 310
Query: 362 SNLSYG*SESKG 397 + +++KG Sbjct: 311 AKKLEEMAKAKG 322
>sp|Q10Z46|PGK_TRIEI Phosphoglycerate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pgk PE=3 SV=1 Length = 398
Score = 150 bits (379), Expect = 2e-36 Identities = 78/132 (59%), Positives = 94/132 (71%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 DPE AK+LASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAG+L+++EL +L GA+ +P Sbjct: 130 DPEFAKQLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGYLIEQELKFLQGAIDSP 189
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADKARA 361 P AA E+LL+KCD L+LGGGMIFTFY A+GL+ SLV DK Sbjct: 190 QKPLAAIIGGSKVSSKIGVIEALLDKCDKLLLGGGMIFTFYKARGLSVGKSLVEEDKIEL 249
Query: 362 SNLSYG*SESKG 397 + ++ KG Sbjct: 250 AKSLEAKAKEKG 261
>sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1 Length = 400
Score = 147 bits (371), Expect = 2e-35 Identities = 75/117 (64%), Positives = 85/117 (72%) Frame = +2
Query: 2 DPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNP 181 DPE AKKLA+ AD YVNDAFGTAHRAHASTEGVTK+LSPSVAG+L++KEL YL A+ NP Sbjct: 130 DPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIENP 189
Query: 182 THPFAAXXXXXXXXXXXXXXESLLEKCDILVLGGGMIFTFYNAQGLADRSSLV*ADK 352 P AA E+LLEKCD L++GGGMIFTFY A+GL SLV DK Sbjct: 190 QRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDK 246
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PIR4 |
Definition |
tr|A9PIR4|A9PIR4_POPJC Phosphoglycerate kinase OS=Populus jackii |
Align length |
117 |
Score (bit) |
169.0 |
E-value |
4.0e-42 |
Report |
|