DK948219 |
Clone id |
TST38A01NGRL0002_L21 |
Library |
TST38 |
Length |
665 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_L21. 5' end sequence. |
Accession |
DK948219 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL944Contig1 |
Sequence |
ATAGTGCGCGTGCGCCTTCGCAGCAGCGCGCAAAACGCAGCTATGGCGGCAGCAGCAGCA ATGAGGAATGGCGCGGCCATGGGTCTCTCTACGCCCATCCCCACCTCCAAGCGTGGCCTC TGCTCATCCTTCTTACCGCCTCTGCAGCCTCGCAGCAGATGCCTTGGCATGGCTCCAGGT CTCTCGTTGCCTGCACGCCTGGGCTTGGCCCCATCGCCTCACCGCCCCCTCCACATTTCT GCTTCTGCTGCCGCTCAAACTGCCTCGGCCCCAGCTGAGCCCCCCAAGGCTACCCCCAGC AATATTTGGCTCTCCAACGTTACCCCCATTTGGAAGAAACCCTATTTCTTGAACAGGACC TGGTCAGCCAGTGACATTGGAATTGGGATCTATTTGCTACTCACTCATCTGGGCTGCCTC CTTGCCCCCTTCACGTTCACCTGGAAGGCTTTTGGGGTGTTTCTTGGCATGTATGTAATT ACGGGTATGCTCGGAATCACCCTATCGTTTCACAGAAACCTCTCCCACAAGAGCTTCACC CTTCCTAAGTGGTTGGAGTATACATTTGCATACTGTGGCGTCCTGGCTCTTCAGGGGGAT CCTTTGGAATGGGTGAGCTCACATCGATACCATCATCAACACTGTGATACAGAGATGGAT CCCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q949X0 |
Definition |
sp|Q949X0|ADS3_ARATH Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana |
Align length |
110 |
Score (bit) |
154.0 |
E-value |
4.0e-37 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SDT2 |
Definition |
tr|A9SDT2|A9SDT2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
121 |
Score (bit) |
179.0 |
E-value |
2.0e-43 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948219|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_L21, 5' (665 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SDT2|A9SDT2_PHYPA Predicted protein (Fragment) OS=Physcomit... 179 2e-43 tr|Q8S4Q3|Q8S4Q3_PICGL Desaturase delta 9 OS=Picea glauca GN=Des... 168 3e-40 tr|A9NXX9|A9NXX9_PICSI Putative uncharacterized protein OS=Picea... 168 3e-40 tr|A4S9D8|A4S9D8_OSTLU Predicted protein OS=Ostreococcus lucimar... 165 2e-39 tr|A9U463|A9U463_PHYPA Predicted protein OS=Physcomitrella paten... 159 1e-37 tr|A8J015|A8J015_CHLRE MGDG specific palmitate delta-7 desaturas... 150 9e-35 tr|A7QIM3|A7QIM3_VITVI Chromosome chr9 scaffold_104, whole genom... 150 9e-35 tr|B4X949|B4X949_DESSO Delta-9 fatty acid desaturase OS=Descurai... 141 3e-32 tr|Q7DN88|Q7DN88_ROSHC Delta-9 desaturase OS=Rosa hybrid cultiva... 127 8e-28 tr|O04700|O04700_ROSHC Senescence-inducible gene protein (Fragme... 127 8e-28 tr|Q9FV68|Q9FV68_LIMDO Delta5 acyl-CoA desaturase (Fragment) OS=... 123 1e-26 tr|A8JEN2|A8JEN2_CHLRE Fatty acid desaturase OS=Chlamydomonas re... 119 2e-25 tr|A0ZMU4|A0ZMU4_NODSP Delta-9 desaturase OS=Nodularia spumigena... 115 3e-24 tr|B1XIS7|B1XIS7_SYNP2 Delta-9 acyl-lipid desaturase OS=Synechoc... 112 2e-23 tr|O07873|O07873_SYNP2 Delta-9 desaturase OS=Synechococcus sp. (... 112 2e-23 tr|Q44502|Q44502_ANASP Delta-9 desaturase OS=Anabaena sp. (strai... 112 2e-23 tr|Q79F73|Q79F73_ANAVA Fatty-acid desaturase OS=Anabaena variabi... 112 2e-23 tr|B7JXH1|B7JXH1_SYNP8 Stearoyl-CoA 9-desaturase OS=Synechococcu... 112 2e-23 tr|B4BVL8|B4BVL8_9CHRO Stearoyl-CoA 9-desaturase OS=Cyanothece s... 112 2e-23 tr|Q44117|Q44117_SYNP6 Delta-9 acyl-lipid desaturase OS=Synechoc... 112 3e-23 tr|Q3M5C5|Q3M5C5_ANAVT Delta-9 acyl-phospholipid desaturase OS=A... 112 3e-23 tr|Q31K28|Q31K28_SYNE7 Delta-9 acyl-phospholipid desaturase OS=S... 112 3e-23 tr|Q4BXX0|Q4BXX0_CROWT Stearoyl-CoA 9-desaturase OS=Crocosphaera... 110 8e-23 tr|A0Z057|A0Z057_9CYAN Delta-9 desaturase OS=Lyngbya sp. PCC 810... 109 2e-22 tr|B1WWX9|B1WWX9_CYAA5 Fatty acid desaturase OS=Cyanothece (stra... 108 3e-22 tr|Q115U2|Q115U2_TRIEI Delta-9 acyl-phospholipid desaturase OS=T... 108 4e-22 tr|B0JWW8|B0JWW8_MICAN Delta 9 acyl-lipid desaturase OS=Microcys... 107 9e-22 tr|O33722|O33722_SPIPL Delta-9 desaturase OS=Spirulina platensis... 107 9e-22 tr|B7KE48|B7KE48_9CHRO Stearoyl-CoA 9-desaturase OS=Cyanothece s... 107 9e-22 tr|B5W728|B5W728_SPIMA Stearoyl-CoA 9-desaturase OS=Arthrospira ... 107 9e-22
>tr|A9SDT2|A9SDT2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_15475 PE=3 SV=1 Length = 292
Score = 179 bits (453), Expect = 2e-43 Identities = 80/121 (66%), Positives = 97/121 (80%), Gaps = 1/121 (0%) Frame = +1
Query: 304 IWLSNVTPIWKKPYFLNRTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVIT 483 IWLS+V ++ YF NR W++ D+ +++ H CL AP TF+W+A GVF+G+YVIT Sbjct: 2 IWLSDVVVKRRRNYFKNRQWTSKDLTYAGFMIFMHGLCLFAPATFSWEAVGVFMGLYVIT 61
Query: 484 GMLGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLAL-QGDPLEWVSSHRYHHQHCDTEMD 660 GMLGITLS+HRNLSHKSF +PKWLEYTFAYCGV A+ QGDP EWVS+HRYHHQHCDTE D Sbjct: 62 GMLGITLSYHRNLSHKSFKVPKWLEYTFAYCGVQAVQQGDPTEWVSAHRYHHQHCDTEND 121
Query: 661 P 663 P Sbjct: 122 P 122
>tr|Q8S4Q3|Q8S4Q3_PICGL Desaturase delta 9 OS=Picea glauca GN=Des9 PE=2 SV=1 Length = 382
Score = 168 bits (425), Expect = 3e-40 Identities = 75/111 (67%), Positives = 89/111 (80%), Gaps = 1/111 (0%) Frame = +1
Query: 334 KKPYFLN-RTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVITGMLGITLSF 510 +KP+ L R WS DIG + H CLLAPFTFTWKAFGVF +YV+TG+LGITLS+ Sbjct: 98 RKPFLLELREWSLGDIGAAGTVFGMHALCLLAPFTFTWKAFGVFAVLYVVTGLLGITLSY 157
Query: 511 HRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHCDTEMDP 663 HRNLSH+SF LPKWLEY FAYCGV A+QGDPL+WVS+HRYHH++CD+ DP Sbjct: 158 HRNLSHRSFRLPKWLEYLFAYCGVQAVQGDPLDWVSTHRYHHEYCDSVKDP 208
>tr|A9NXX9|A9NXX9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 383
Score = 168 bits (425), Expect = 3e-40 Identities = 75/111 (67%), Positives = 89/111 (80%), Gaps = 1/111 (0%) Frame = +1
Query: 334 KKPYFLN-RTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVITGMLGITLSF 510 +KP+ L R WS DIG + H CLLAPFTFTWKAFGVF +YV+TG+LGITLS+ Sbjct: 99 RKPFLLELREWSLGDIGAAGTVFGMHALCLLAPFTFTWKAFGVFAVLYVVTGLLGITLSY 158
Query: 511 HRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHCDTEMDP 663 HRNLSH+SF LPKWLEY FAYCGV A+QGDPL+WVS+HRYHH++CD+ DP Sbjct: 159 HRNLSHRSFRLPKWLEYLFAYCGVQAVQGDPLDWVSTHRYHHEYCDSVKDP 209
>tr|A4S9D8|A4S9D8_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_51664 PE=3 SV=1 Length = 358
Score = 165 bits (418), Expect = 2e-39 Identities = 76/120 (63%), Positives = 89/120 (74%) Frame = +1
Query: 304 IWLSNVTPIWKKPYFLNRTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVIT 483 ++LS++ K+ FL R W +DI ++ + HLGCLLAPFTFTW AF FL MY IT Sbjct: 65 VFLSDILASPKRNAFL-RKWIPTDITYVSFIGVMHLGCLLAPFTFTWGAFKCFLAMYFIT 123
Query: 484 GMLGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHCDTEMDP 663 G LGITLS+HR ++HKSF PKWLEY AYCG LA+QGDPLEW SSHRYHHQHCDT DP Sbjct: 124 GCLGITLSYHRQIAHKSFRTPKWLEYALAYCGALAMQGDPLEWASSHRYHHQHCDTPKDP 183
>tr|A9U463|A9U463_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_61927 PE=3 SV=1 Length = 257
Score = 159 bits (403), Expect = 1e-37 Identities = 70/83 (84%), Positives = 75/83 (90%) Frame = +1
Query: 415 CLLAPFTFTWKAFGVFLGMYVITGMLGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLALQ 594 CLLAP TF+W A GV LG+YVITG+ GITLSFHRNLSHKSF LPKWLEY+FAYCGV A+Q Sbjct: 5 CLLAPATFSWDALGVSLGLYVITGLFGITLSFHRNLSHKSFKLPKWLEYSFAYCGVQAVQ 64
Query: 595 GDPLEWVSSHRYHHQHCDTEMDP 663 GDPLEWVSSHRYHHQHCDTE DP Sbjct: 65 GDPLEWVSSHRYHHQHCDTEKDP 87
>tr|A8J015|A8J015_CHLRE MGDG specific palmitate delta-7 desaturase OS=Chlamydomonas reinhardtii GN=FAD5A PE=3 SV=1 Length = 306
Score = 150 bits (378), Expect = 9e-35 Identities = 69/120 (57%), Positives = 87/120 (72%) Frame = +1
Query: 304 IWLSNVTPIWKKPYFLNRTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVIT 483 ++LS+V K+P FLNR W+++D ++ HL APFT++ + +FL Y +T Sbjct: 9 VFLSDVATKGKRPSFLNRDWNSTDKAFLAFIGGMHLLACCAPFTYSPQMVALFLASYFVT 68
Query: 484 GMLGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHCDTEMDP 663 G LGITLS+HR LSHKSFT+PKWLEY AYCGVLA+QGDPLEW SSHRYHH H DT +DP Sbjct: 69 GCLGITLSYHRMLSHKSFTVPKWLEYILAYCGVLAVQGDPLEWSSSHRYHHLHTDTPLDP 128
>tr|A7QIM3|A7QIM3_VITVI Chromosome chr9 scaffold_104, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000320001 PE=3 SV=1 Length = 382
Score = 150 bits (378), Expect = 9e-35 Identities = 63/103 (61%), Positives = 79/103 (76%) Frame = +1
Query: 355 RTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVITGMLGITLSFHRNLSHKS 534 R W++ D+G +L H + APF F W AF + + +Y +TG+LGITLS+HRNLSHKS Sbjct: 103 RKWNSLDVGTAGVILAMHFLSVFAPFVFNWSAFWLAMALYAVTGLLGITLSYHRNLSHKS 162
Query: 535 FTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHCDTEMDP 663 F LPKWLEY+FAYCGV ALQG+P +WVS+HRYHHQ CD+E DP Sbjct: 163 FKLPKWLEYSFAYCGVQALQGNPTDWVSTHRYHHQFCDSERDP 205
>tr|B4X949|B4X949_DESSO Delta-9 fatty acid desaturase OS=Descurainia sophia PE=2 SV=1 Length = 377
Score = 141 bits (356), Expect = 3e-32 Identities = 67/118 (56%), Positives = 84/118 (71%) Frame = +1
Query: 310 LSNVTPIWKKPYFLNRTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVITGM 489 LS V + KK F R W+ D+ + ++ HL L APF F W AF VFL + +I G+ Sbjct: 87 LSEVVVVGKKRAFWERNWNYWDMTKLVIIVGLHLLSLSAPFYFNWTAFRVFLSLAIINGI 146
Query: 490 LGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHCDTEMDP 663 ITLS+HRNLSH+SF LPKWLEY FAY GVLA +GDP+EWVS+HRYHH+HC+T+ DP Sbjct: 147 C-ITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFEGDPVEWVSNHRYHHKHCETQRDP 203
>tr|Q7DN88|Q7DN88_ROSHC Delta-9 desaturase OS=Rosa hybrid cultivar PE=2 SV=1 Length = 297
Score = 127 bits (318), Expect = 8e-28 Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 4/110 (3%) Frame = +1
Query: 346 FLNRTWSASDIGIGIYLLLTHLG----CLLAPFTFTWKAFGVFLGMYVITGMLGITLSFH 513 F R W D+ Y L LG CLLAPF FTW A V + +Y+++GM G+T+S+H Sbjct: 12 FFGREWDFMDL----YHLTLFLGVPFVCLLAPFQFTWGALWVAISLYLVSGM-GVTISYH 66
Query: 514 RNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHCDTEMDP 663 RNL+H+SF +PKWLEY+ AYC VL+LQG PLEWVS+HRYHHQ + DP Sbjct: 67 RNLAHQSFKVPKWLEYSLAYCAVLSLQGSPLEWVSTHRYHHQFTEKLRDP 116
>tr|O04700|O04700_ROSHC Senescence-inducible gene protein (Fragment) OS=Rosa hybrid cultivar GN=senescence-inducible gene PE=2 SV=1 Length = 303
Score = 127 bits (318), Expect = 8e-28 Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 4/110 (3%) Frame = +1
Query: 346 FLNRTWSASDIGIGIYLLLTHLG----CLLAPFTFTWKAFGVFLGMYVITGMLGITLSFH 513 F R W D+ Y L LG CLLAPF FTW A V + +Y+++GM G+T+S+H Sbjct: 18 FFGREWDFMDL----YHLTLFLGVPFVCLLAPFQFTWGALWVAISLYLVSGM-GVTISYH 72
Query: 514 RNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHCDTEMDP 663 RNL+H+SF +PKWLEY+ AYC VL+LQG PLEWVS+HRYHHQ + DP Sbjct: 73 RNLAHQSFKVPKWLEYSLAYCAVLSLQGSPLEWVSTHRYHHQFTEKLRDP 122
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