DK948223 |
Clone id |
TST38A01NGRL0002_M01 |
Library |
TST38 |
Length |
688 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_M01. 5' end sequence. |
Accession |
DK948223 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3371Contig1 |
Sequence |
AGCAGCGACAGCAGAAGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTGTTTTTAA CGTCGTCGAAACTATCCCAAGAGACGACGACAGTTGAACTCAAGAGCTGTTAGTGAAGAG GGAGAGAGCAACCTCACGGCTGCGCCCCACCCTCAGGCCTGCAGGTAGACTTGCCTCTAC CCCCCTTCTGTGTCCCAGGCATTCTGGGTTGTGACAAGTGATAACAACACTGTATAAAAG GAGGCGAGCCTGGAAACAGAAGAAGAGAACTTTCAGAACAATCCAAGAGAAAACGTACCG GGAAAATGTATTCCAACGCCAATTTGCGACTGGCAACACTACAAAACCAGCTCTCGTCTT CCTCGCCGCTCTCTGATGGTGCCAAATTCTTGCAGGCAGCAGATCGGCTTGGATTCAAAG TAGAGCCAAACGTGCGGCGGGCTATCTTTGAGTCCTCTCCTGTGGTTGCATTGGAGTCAA CAATTATTACCCATGGGATGCCATATCCTCAAAATGTCCAGACTGCAAAAGAAGTAGAGG GGATTATTGTCAGACATGGGGCTGTTCCAGCAACTATTGCGATTCTGAAAGGGATTCCAT GCATAGGTTTATCTGTGGATGAACTAGAAGAGTTGGGACAAAATGGCTCAAACTTTACGA AAACAGCTCGCAGGGACATAAGTCATGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P33025 |
Definition |
sp|P33025|YEIN_ECOLI UPF0724 protein yeiN OS=Escherichia coli (strain K12) |
Align length |
88 |
Score (bit) |
103.0 |
E-value |
9.0e-22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LPS4 |
Definition |
tr|Q9LPS4|Q9LPS4_ARATH F11F12.14 protein OS=Arabidopsis thaliana |
Align length |
103 |
Score (bit) |
115.0 |
E-value |
3.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948223|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_M01, 5' (688 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LPS4|Q9LPS4_ARATH F11F12.14 protein OS=Arabidopsis thaliana... 115 3e-24 tr|Q84K35|Q84K35_ARATH Putative uncharacterized protein At1g5051... 115 3e-24 tr|Q9C6Q2|Q9C6Q2_ARATH Putative uncharacterized protein F17J6.5 ... 114 4e-24 tr|A9TWE2|A9TWE2_PHYPA Predicted protein OS=Physcomitrella paten... 112 2e-23 tr|A7PFX6|A7PFX6_VITVI Chromosome chr6 scaffold_15, whole genome... 112 3e-23 tr|Q6ZK88|Q6ZK88_ORYSJ Erwinia chrysanthemi IndA protein homolog... 111 5e-23 tr|Q6ZK87|Q6ZK87_ORYSJ cDNA clone:J013116B08, full insert sequen... 111 5e-23 tr|Q0J4M3|Q0J4M3_ORYSJ Os08g0504400 protein OS=Oryza sativa subs... 111 5e-23 tr|B8BC97|B8BC97_ORYSI Putative uncharacterized protein OS=Oryza... 111 5e-23 tr|A3BUM3|A3BUM3_ORYSJ Putative uncharacterized protein OS=Oryza... 111 5e-23 tr|B7NQ70|B7NQ70_ECOLX Putative uncharacterized protein yeiN OS=... 108 3e-22 tr|A8AE58|A8AE58_CITK8 Putative uncharacterized protein OS=Citro... 105 4e-21 tr|B1IYA5|B1IYA5_ECOLC Indigoidine synthase A family protein OS=... 104 6e-21 tr|A8A227|A8A227_ECOHS Indigoidine synthase A like protein OS=Es... 104 6e-21 tr|B3X9B3|B3X9B3_ECOLX Indigoidine synthase A like protein OS=Es... 104 6e-21 tr|B2N6R4|B2N6R4_ECOLX Indigoidine synthase A like protein OS=Es... 104 6e-21 tr|Q8XE93|Q8XE93_ECO57 Putative uncharacterized protein yeiN (Pu... 103 1e-20 tr|B6I8L6|B6I8L6_ECOSE Putative uncharacterized protein OS=Esche... 103 1e-20 tr|B5YWV6|B5YWV6_ECO5E Indigoidine synthase A like protein OS=Es... 103 1e-20 tr|B2TVS7|B2TVS7_SHIB3 Indigoidine synthase A like protein OS=Sh... 103 1e-20 tr|B1X863|B1X863_ECODH Conserved protein OS=Escherichia coli (st... 103 1e-20 tr|B1LKR2|B1LKR2_ECOSM Indigoidine synthase A like protein OS=Es... 103 1e-20 tr|A7ZNY8|A7ZNY8_ECO24 Indigoidine synthase A like protein OS=Es... 103 1e-20 tr|B7NMX9|B7NMX9_ECOLX Putative uncharacterized protein yeiN OS=... 103 1e-20 tr|B7LAI8|B7LAI8_ECOLX Putative uncharacterized protein yeiN OS=... 103 1e-20 tr|B6ZYS0|B6ZYS0_ECO57 Indigoidine synthase A like protein OS=Es... 103 1e-20 tr|B3WJV9|B3WJV9_ECOLX Indigoidine synthase A like protein OS=Es... 103 1e-20 tr|B3I155|B3I155_ECOLX Indigoidine synthase A like protein OS=Es... 103 1e-20 tr|B3C4R7|B3C4R7_ECO57 Indigoidine synthase A like protein OS=Es... 103 1e-20 tr|B3BLQ5|B3BLQ5_ECO57 Indigoidine synthase A like protein OS=Es... 103 1e-20
>tr|Q9LPS4|Q9LPS4_ARATH F11F12.14 protein OS=Arabidopsis thaliana GN=F11F12.14 PE=4 SV=1 Length = 324
Score = 115 bits (288), Expect = 3e-24 Identities = 60/103 (58%), Positives = 73/103 (70%) Frame = +3
Query: 378 GAKFLQAADRLGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRH 557 G FL+ L K+ P V A+ VVALESTII+HGMPYPQN+QTAKEVE I+ + Sbjct: 13 GPSFLKQLRSL-VKISPQVSEALSNGRAVVALESTIISHGMPYPQNLQTAKEVESIVREN 71
Query: 558 GAVPATIAILKGIPCIGLSVDELEELGQNGSNFTKTARRDISH 686 GA+PATIAIL G+PCIGLS +ELE L G + KTA RDI++ Sbjct: 72 GAIPATIAILNGVPCIGLSEEELERLASLGKSVQKTAGRDIAN 114
>tr|Q84K35|Q84K35_ARATH Putative uncharacterized protein At1g50510 OS=Arabidopsis thaliana GN=At1g50510 PE=2 SV=1 Length = 330
Score = 115 bits (287), Expect = 3e-24 Identities = 65/127 (51%), Positives = 82/127 (64%), Gaps = 2/127 (1%) Frame = +3
Query: 312 SNANLRLATLQNQXXXXXXXXDGAKFLQAADRLG--FKVEPNVRRAIFESSPVVALESTI 485 S A R++ LQN L+A ++L K+ P V A+ VVALESTI Sbjct: 4 SLAQSRISNLQNHLSP----------LEANNKLRSLVKISPQVSEALSNGRAVVALESTI 53
Query: 486 ITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILKGIPCIGLSVDELEELGQNGSNFTKT 665 I+HGMPYPQN+QTAKEVE I+ +GA+PATIAIL G+PCIGLS +ELE L G + KT Sbjct: 54 ISHGMPYPQNLQTAKEVESIVRENGAIPATIAILNGVPCIGLSEEELERLASLGKSVQKT 113
Query: 666 ARRDISH 686 A RDI++ Sbjct: 114 AGRDIAN 120
>tr|Q9C6Q2|Q9C6Q2_ARATH Putative uncharacterized protein F17J6.5 OS=Arabidopsis thaliana GN=F17J6.5 PE=4 SV=1 Length = 362
Score = 114 bits (286), Expect = 4e-24 Identities = 56/90 (62%), Positives = 68/90 (75%) Frame = +3
Query: 417 KVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILKGI 596 K+ P V A+ VVALESTII+HGMPYPQN+QTAKEVE I+ +GA+PATIAIL G+ Sbjct: 32 KISPQVSEALSNGRAVVALESTIISHGMPYPQNLQTAKEVESIVRENGAIPATIAILNGV 91
Query: 597 PCIGLSVDELEELGQNGSNFTKTARRDISH 686 PCIGLS +ELE L G + KTA RDI++ Sbjct: 92 PCIGLSEEELERLASLGKSVQKTAGRDIAN 121
>tr|A9TWE2|A9TWE2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108917 PE=4 SV=1 Length = 314
Score = 112 bits (281), Expect = 2e-23 Identities = 57/92 (61%), Positives = 68/92 (73%) Frame = +3
Query: 411 GFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILK 590 G ++ +VR A+ PVVALESTII+HGMPYPQN +TAKEVE I+ GAVPATIAIL Sbjct: 10 GIQIRADVRDALERGFPVVALESTIISHGMPYPQNFETAKEVESIVRDSGAVPATIAILD 69
Query: 591 GIPCIGLSVDELEELGQNGSNFTKTARRDISH 686 G PCIGL EL++L Q G KT+RRDI+H Sbjct: 70 GAPCIGLEEAELKKLAQLGKKAIKTSRRDIAH 101
>tr|A7PFX6|A7PFX6_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017290001 PE=4 SV=1 Length = 329
Score = 112 bits (279), Expect = 3e-23 Identities = 54/89 (60%), Positives = 68/89 (76%) Frame = +3
Query: 420 VEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILKGIP 599 + P V A+ VVALESTII+HGMPYP+N++TAKEVE I+ +GAVPAT+AIL GIP Sbjct: 20 ISPEVSNALSCGRAVVALESTIISHGMPYPRNLETAKEVEAIVRTNGAVPATVAILDGIP 79
Query: 600 CIGLSVDELEELGQNGSNFTKTARRDISH 686 CIGLS+++LE L G+ K ARRDI+H Sbjct: 80 CIGLSIEQLERLASLGTKAQKAARRDIAH 108
>tr|Q6ZK88|Q6ZK88_ORYSJ Erwinia chrysanthemi IndA protein homolog-like OS=Oryza sativa subsp. japonica GN=OJ1134_H03.5-1 PE=4 SV=1 Length = 327
Score = 111 bits (277), Expect = 5e-23 Identities = 54/93 (58%), Positives = 68/93 (73%) Frame = +3
Query: 408 LGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAIL 587 +G V P V A+ VVALESTII HGMPYP+N+QTA EVE ++ +GAVPATIAIL Sbjct: 13 MGVAVSPEVEAALARGGAVVALESTIICHGMPYPKNLQTAMEVEAVVRENGAVPATIAIL 72
Query: 588 KGIPCIGLSVDELEELGQNGSNFTKTARRDISH 686 G+P +GLS ++L+ L +G F KTARRDI+H Sbjct: 73 NGVPHVGLSGEQLKSLAVSGRQFQKTARRDIAH 105
>tr|Q6ZK87|Q6ZK87_ORYSJ cDNA clone:J013116B08, full insert sequence OS=Oryza sativa subsp. japonica GN=OJ1134_H03.5-2 PE=2 SV=1 Length = 361
Score = 111 bits (277), Expect = 5e-23 Identities = 54/93 (58%), Positives = 68/93 (73%) Frame = +3
Query: 408 LGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAIL 587 +G V P V A+ VVALESTII HGMPYP+N+QTA EVE ++ +GAVPATIAIL Sbjct: 13 MGVAVSPEVEAALARGGAVVALESTIICHGMPYPKNLQTAMEVEAVVRENGAVPATIAIL 72
Query: 588 KGIPCIGLSVDELEELGQNGSNFTKTARRDISH 686 G+P +GLS ++L+ L +G F KTARRDI+H Sbjct: 73 NGVPHVGLSGEQLKSLAVSGRQFQKTARRDIAH 105
>tr|Q0J4M3|Q0J4M3_ORYSJ Os08g0504400 protein OS=Oryza sativa subsp. japonica GN=Os08g0504400 PE=4 SV=1 Length = 304
Score = 111 bits (277), Expect = 5e-23 Identities = 54/93 (58%), Positives = 68/93 (73%) Frame = +3
Query: 408 LGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAIL 587 +G V P V A+ VVALESTII HGMPYP+N+QTA EVE ++ +GAVPATIAIL Sbjct: 13 MGVAVSPEVEAALARGGAVVALESTIICHGMPYPKNLQTAMEVEAVVRENGAVPATIAIL 72
Query: 588 KGIPCIGLSVDELEELGQNGSNFTKTARRDISH 686 G+P +GLS ++L+ L +G F KTARRDI+H Sbjct: 73 NGVPHVGLSGEQLKSLAVSGRQFQKTARRDIAH 105
>tr|B8BC97|B8BC97_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29792 PE=4 SV=1 Length = 327
Score = 111 bits (277), Expect = 5e-23 Identities = 54/93 (58%), Positives = 68/93 (73%) Frame = +3
Query: 408 LGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAIL 587 +G V P V A+ VVALESTII HGMPYP+N+QTA EVE ++ +GAVPATIAIL Sbjct: 13 MGVAVSPEVEAALARGGAVVALESTIICHGMPYPKNLQTAMEVEAVVRENGAVPATIAIL 72
Query: 588 KGIPCIGLSVDELEELGQNGSNFTKTARRDISH 686 G+P +GLS ++L+ L +G F KTARRDI+H Sbjct: 73 NGVPHVGLSGEQLKSLAVSGRQFQKTARRDIAH 105
>tr|A3BUM3|A3BUM3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026745 PE=4 SV=1 Length = 329
Score = 111 bits (277), Expect = 5e-23 Identities = 54/93 (58%), Positives = 68/93 (73%) Frame = +3
Query: 408 LGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAIL 587 +G V P V A+ VVALESTII HGMPYP+N+QTA EVE ++ +GAVPATIAIL Sbjct: 1 MGVAVSPEVEAALARGGAVVALESTIICHGMPYPKNLQTAMEVEAVVRENGAVPATIAIL 60
Query: 588 KGIPCIGLSVDELEELGQNGSNFTKTARRDISH 686 G+P +GLS ++L+ L +G F KTARRDI+H Sbjct: 61 NGVPHVGLSGEQLKSLAVSGRQFQKTARRDIAH 93
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