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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948231
Clone id TST38A01NGRL0002_M09
Library
Length 660
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_M09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GTCAGTTTTCTGGTGATATGGGTGAAAAGGTGTGAAGCTCTCTCTTTCCTTTTAGATAGA
AAATGCTGTACTTCTACTTTGAACTTCTAATTACCAGTTCTTTAAATGAGTGCTGTACCA
ATTATTGACTATTTGTAGGGAGAGAGAAAGTTCTTGCTTAACTTCTATTCTGACCATCTG
ATTTGTTGGCCGATCATTTAATAGCGTACTTGTGACTTGTATCATACAGGGTCAGAGGAG
TTGTTTTTGAGGTGTGACACGAGTATAGAACGTGTTATGGTTGTCACATATGTAAACAGA
CAGTTCAGTTGCCAAAGTATTAGCTGATTGAATGTCAAGAGCTTAGATTGCACCTTTGCA
GGTCACACTTGGAATTCAAAGGGCACATAATCGCCTGAATGTCATCTAAGAAATTGCAAT
GTTTGAAGGCTTCATCGACTTATTTAAGTTAGGGAGTAACATATGTATTGGCCTCTTCTT
TCTGATTGTAATGCAGTCCAAATGGAAATTGCCTTATGTTCTTGTCTGCTGAAGGAGCTG
TCACCACTGGAGTCCACAGTGGGACAAACTCATTACACGTTGTGGAATGGCATGGACTTG
AAACTTCAAGTTCAAACTTAGACATCAGGGAGGTGGTGTCTGTGGCACAACCGGCAGGGG
■■Homology search results ■■ -
sp_hit_id A1TSA0
Definition sp|A1TSA0|UBIG_ACIAC 3-demethylubiquinone-9 3-methyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1)
Align length 38
Score (bit) 32.7
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948231|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_M09, 5'
         (660 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A1TSA0|UBIG_ACIAC 3-demethylubiquinone-9 3-methyltransferase ...    33   1.7  
sp|Q29498|NOS1_SHEEP Nitric oxide synthase, brain (Fragments) OS...    32   3.9  
sp|O19132|NOS1_RABIT Nitric oxide synthase, brain OS=Oryctolagus...    31   6.7  
sp|P29475|NOS1_HUMAN Nitric oxide synthase, brain OS=Homo sapien...    31   6.7  

>sp|A1TSA0|UBIG_ACIAC 3-demethylubiquinone-9 3-methyltransferase
           OS=Acidovorax avenae subsp. citrulli (strain AAC00-1)
           GN=ubiG PE=3 SV=1
          Length = 238

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 522 LSAEGAVTTGVHSGTNSLHVVEWHGLETSSSNLDIREV 635
           ++ +GA  TG+   T SL V + H LE  + ++  REV
Sbjct: 69  MARKGATVTGIDLATKSLKVAQLHALEAGTPDIQYREV 106


>sp|Q29498|NOS1_SHEEP Nitric oxide synthase, brain (Fragments)
           OS=Ovis aries GN=NOS1 PE=2 SV=2
          Length = 186

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -1

Query: 189 PTNQMVRIEVKQELSLSLQIVNNWYSTH 106
           P NQ+V++E+ +E + +L +++NW   H
Sbjct: 144 PANQLVKVELLEERNTALGVISNWTDEH 171


>sp|O19132|NOS1_RABIT Nitric oxide synthase, brain OS=Oryctolagus
            cuniculus GN=NOS1 PE=2 SV=1
          Length = 1435

 Score = 30.8 bits (68), Expect = 6.7
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = -1

Query: 189  PTNQMVRIEVKQELSLSLQIVNNW 118
            P NQMV++E+ +E + +L +++NW
Sbjct: 1062 PANQMVKVELLEERNTALGVISNW 1085


>sp|P29475|NOS1_HUMAN Nitric oxide synthase, brain OS=Homo sapiens
            GN=NOS1 PE=1 SV=2
          Length = 1434

 Score = 30.8 bits (68), Expect = 6.7
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = -1

Query: 189  PTNQMVRIEVKQELSLSLQIVNNW 118
            P NQMV++E+ +E + +L +++NW
Sbjct: 1061 PVNQMVKVELLEERNTALGVISNW 1084
tr_hit_id A9SN79
Definition tr|A9SN79|A9SN79_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 67
Score (bit) 54.7
E-value 5.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948231|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_M09, 5'
         (660 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SN79|A9SN79_PHYPA Predicted protein OS=Physcomitrella paten...    55   5e-06
tr|A9U5A4|A9U5A4_PHYPA Predicted protein (Fragment) OS=Physcomit...    52   4e-05
tr|B6U4F7|B6U4F7_MAIZE Acylamino-acid-releasing enzyme OS=Zea ma...    48   6e-04
tr|Q338C1|Q338C1_ORYSJ Prolyl oligopeptidase family protein, exp...    45   0.003
tr|Q0IXP9|Q0IXP9_ORYSJ Os10g0415600 protein OS=Oryza sativa subs...    45   0.003
tr|B8BGU2|B8BGU2_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.003
tr|B6SVB6|B6SVB6_MAIZE Acylamino-acid-releasing enzyme OS=Zea ma...    45   0.005
tr|B4FYG2|B4FYG2_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.005
tr|A3C4R3|A3C4R3_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.005
tr|A7NWZ0|A7NWZ0_VITVI Chromosome chr5 scaffold_2, whole genome ...    44   0.012
tr|B6SYG8|B6SYG8_MAIZE Putative uncharacterized protein OS=Zea m...    42   0.033
tr|Q338C0|Q338C0_ORYSJ Prolyl oligopeptidase family protein, exp...    42   0.044
tr|Q0IXP8|Q0IXP8_ORYSJ Os10g0415800 protein (Fragment) OS=Oryza ...    42   0.044
tr|Q84LM4|Q84LM4_ARATH Acylamino acid-releasing enzyme OS=Arabid...    39   0.28 
tr|A3C4R4|A3C4R4_ORYSJ Putative uncharacterized protein OS=Oryza...    39   0.28 
tr|A2Z798|A2Z798_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.28 
tr|A8I517|A8I517_CHLRE Acylaminoacyl-peptidase OS=Chlamydomonas ...    38   0.48 
tr|B2G3Z3|B2G3Z3_ZYGRO Ribosomal RNA assembly protein KRR1 OS=Zy...    34   7.1  

>tr|A9SN79|A9SN79_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_186678 PE=4 SV=1
          Length = 791

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 29/67 (43%), Positives = 40/67 (59%)
 Frame = +3

Query: 456 VTYVLASSF*L*CSPNGNCLMFLSAEGAVTTGVHSGTNSLHVVEWHGLETSSSNLDIREV 635
           +T  ++S+F    SPNG  L+FLSAE AV++G H+ TNSLH + W           I++V
Sbjct: 318 LTGTISSAFSPRFSPNGKMLVFLSAETAVSSGAHNATNSLHCINWPADGIVCKQKQIKDV 377

Query: 636 VSVAQPA 656
           V V Q A
Sbjct: 378 VKVVQHA 384


>tr|A9U5A4|A9U5A4_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_30590 PE=4 SV=1
          Length = 766

 Score = 51.6 bits (122), Expect = 4e-05
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = +3

Query: 384 HIIA*MSSKKLQCLKASSTYLS*GVTYVLASSF*L*CSPNGNCLMFLSAEGAVTTGVHSG 563
           H+ A +  ++       +T L+ GV+   +  F    SP+G  L+FLSAE AV +G H+ 
Sbjct: 273 HVEAPVPDREPSDAPREATNLTEGVSSAFSPRF----SPDGKKLVFLSAEAAVKSGAHNA 328

Query: 564 TNSLHVVEW-HGLETSSSNLDIREVVSVAQPA 656
           TNSLH+++W   L        ++++V+V Q A
Sbjct: 329 TNSLHLIDWPTDLIRIGEKPQVKDIVNVVQHA 360


>tr|B6U4F7|B6U4F7_MAIZE Acylamino-acid-releasing enzyme OS=Zea mays
           PE=2 SV=1
          Length = 774

 Score = 47.8 bits (112), Expect = 6e-04
 Identities = 25/63 (39%), Positives = 39/63 (61%)
 Frame = +3

Query: 456 VTYVLASSF*L*CSPNGNCLMFLSAEGAVTTGVHSGTNSLHVVEWHGLETSSSNLDIREV 635
           +T  L+S+F    SP+G  L+F+SA+ AV +G H+ TNSLH +EW        +L + +V
Sbjct: 318 LTANLSSAFFPRFSPDGKYLVFISAKSAVDSGAHNATNSLHRIEWCTDGKLDGSLGVADV 377

Query: 636 VSV 644
           V +
Sbjct: 378 VPI 380


>tr|Q338C1|Q338C1_ORYSJ Prolyl oligopeptidase family protein,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os10g28020 PE=4 SV=1
          Length = 839

 Score = 45.4 bits (106), Expect = 0.003
 Identities = 22/63 (34%), Positives = 39/63 (61%)
 Frame = +3

Query: 456 VTYVLASSF*L*CSPNGNCLMFLSAEGAVTTGVHSGTNSLHVVEWHGLETSSSNLDIREV 635
           +T  L+S+F    SP+G  L+F+SA+ A+ +G H+ TNS+H ++W   +     L + +V
Sbjct: 382 LTSELSSAFFPRFSPDGKYLVFISAKSAIDSGTHNATNSMHKIDWPA-DGKLEGLSVADV 440

Query: 636 VSV 644
           V +
Sbjct: 441 VPI 443


>tr|Q0IXP9|Q0IXP9_ORYSJ Os10g0415600 protein OS=Oryza sativa subsp.
           japonica GN=Os10g0415600 PE=4 SV=1
          Length = 775

 Score = 45.4 bits (106), Expect = 0.003
 Identities = 22/63 (34%), Positives = 39/63 (61%)
 Frame = +3

Query: 456 VTYVLASSF*L*CSPNGNCLMFLSAEGAVTTGVHSGTNSLHVVEWHGLETSSSNLDIREV 635
           +T  L+S+F    SP+G  L+F+SA+ A+ +G H+ TNS+H ++W   +     L + +V
Sbjct: 318 LTSELSSAFFPRFSPDGKYLVFISAKSAIDSGTHNATNSMHKIDWPA-DGKLEGLSVADV 376

Query: 636 VSV 644
           V +
Sbjct: 377 VPI 379


>tr|B8BGU2|B8BGU2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_33573 PE=4 SV=1
          Length = 775

 Score = 45.4 bits (106), Expect = 0.003
 Identities = 22/63 (34%), Positives = 39/63 (61%)
 Frame = +3

Query: 456 VTYVLASSF*L*CSPNGNCLMFLSAEGAVTTGVHSGTNSLHVVEWHGLETSSSNLDIREV 635
           +T  L+S+F    SP+G  L+F+SA+ A+ +G H+ TNS+H ++W   +     L + +V
Sbjct: 318 LTSELSSAFFPRFSPDGKYLVFISAKSAIDSGTHNATNSMHKIDWPA-DGKLEGLSVADV 376

Query: 636 VSV 644
           V +
Sbjct: 377 VPI 379


>tr|B6SVB6|B6SVB6_MAIZE Acylamino-acid-releasing enzyme OS=Zea mays
           PE=2 SV=1
          Length = 783

 Score = 44.7 bits (104), Expect = 0.005
 Identities = 21/50 (42%), Positives = 31/50 (62%)
 Frame = +3

Query: 495 SPNGNCLMFLSAEGAVTTGVHSGTNSLHVVEWHGLETSSSNLDIREVVSV 644
           S +G  L+FLS++ AV +G H+ T+SLHV+ W         LD+ +VV V
Sbjct: 328 SRDGRLLVFLSSKQAVDSGAHNATDSLHVINWPSDWKMDEQLDVTQVVPV 377


>tr|B4FYG2|B4FYG2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 467

 Score = 44.7 bits (104), Expect = 0.005
 Identities = 21/50 (42%), Positives = 31/50 (62%)
 Frame = +3

Query: 495 SPNGNCLMFLSAEGAVTTGVHSGTNSLHVVEWHGLETSSSNLDIREVVSV 644
           S +G  L+FLS++ AV +G H+ T+SLHV+ W         LD+ +VV V
Sbjct: 328 SRDGRLLVFLSSKQAVDSGAHNATDSLHVINWPSDWKMDEQLDVTQVVPV 377


>tr|A3C4R3|A3C4R3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_030285 PE=4 SV=1
          Length = 781

 Score = 44.7 bits (104), Expect = 0.005
 Identities = 19/45 (42%), Positives = 32/45 (71%)
 Frame = +3

Query: 456 VTYVLASSF*L*CSPNGNCLMFLSAEGAVTTGVHSGTNSLHVVEW 590
           +T  L+S+F    SP+G  L+F+SA+ A+ +G H+ TNS+H ++W
Sbjct: 318 LTSELSSAFFPRFSPDGKYLVFISAKSAIDSGTHNATNSMHKIDW 362


>tr|A7NWZ0|A7NWZ0_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020112001
           PE=4 SV=1
          Length = 771

 Score = 43.5 bits (101), Expect = 0.012
 Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
 Frame = +3

Query: 456 VTYVLASSF*L*CSPNGNCLMFLSAEGAVTTGVHSGTNSLHVVEW--HGLETSSSNL-DI 626
           +T  ++S+F    SP+G  L+FLSA+ +V +G HS T+SLH + W   G    S+N+ D+
Sbjct: 312 LTQSISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIAWPTDGKPCPSANIVDV 371

Query: 627 REVVSVAQ 650
             V+  A+
Sbjct: 372 IPVMMCAE 379