DK948237 |
Clone id |
TST38A01NGRL0002_M15 |
Library |
TST38 |
Length |
672 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_M15. 5' end sequence. |
Accession |
DK948237 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL385Contig1 |
Sequence |
CCTCTTTCGATGCGGGCCTTTGAGTGTATCGTCTGCAAACGCGCATCGTCAGGTGACTGC TAGGGCTTTTTCACGTCCTTCCGCTCTGCGATCGGCCTCTCTTCTTCTCTCCGAGCGCCA GTTTTCAGATCGCACCTCGTCTTTCATAAGTTTTGGATTCAGTGGTGACATTCTGTCTTT GAGAACGGATTTTGGCAAGGTCCACCCTTTTGGCTGCCATGTCGGCGGTGGTTTGTGGCA AGCGGTCTCTCTTTGACGAAATTCACCCCCCTATTCCAAAGAGGCTTCGCTGTGGAGGAG GAACTTCTCCTGTTCGATTTGCTTCCTTGAGGAGTGGTTCTCCTGTGGGCTCTTGTGAAG CAGGCTCACCTTCTCTATCTGACTTGTCAGACCAACTTTCCCATCTGAGAACCCTTTTTC CTGAGATGGATGGGCAGCTAATTGAAAAGGTCTTGGAGTCTAGTGGAAACAACCTTGACT CTGCAATACGAAGTCTCAATGAGCTTCGGCTTAGCTCTGATGTCGTGGCAAATGCCTTGA ATTTCTCCAATGACAATAGTGCACCAAACCTGACTCTTGGGCAGGAAGGTGTGGCAAATC AATCAGCTGTTTTGAATGCCGTGGAGGTTGATAAAGCGAATCAGGGTCAATCTGAAGGGA GTGAATGGGCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P62501 |
Definition |
sp|P62501|T22D1_RAT TSC22 domain family protein 1 OS=Rattus norvegicus |
Align length |
61 |
Score (bit) |
34.7 |
E-value |
0.47 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV65 |
Definition |
tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
103 |
Score (bit) |
91.3 |
E-value |
5.0e-17 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948237|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_M15, 5' (672 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea... 91 5e-17 tr|A7PF87|A7PF87_VITVI Chromosome chr11 scaffold_13, whole genom... 91 7e-17 tr|A9PBC1|A9PBC1_POPTR Putative uncharacterized protein OS=Popul... 88 6e-16 tr|A9T5N7|A9T5N7_PHYPA Predicted protein OS=Physcomitrella paten... 87 7e-16 tr|A9U3T0|A9U3T0_PHYPA Predicted protein OS=Physcomitrella paten... 86 3e-15 tr|A9PHI2|A9PHI2_POPTR Putative uncharacterized protein OS=Popul... 82 2e-14 tr|Q94K99|Q94K99_ARATH Putative uncharacterized protein At5g3244... 76 2e-12 tr|Q8H1Q3|Q8H1Q3_ARATH Putative uncharacterized protein At5g3244... 76 2e-12 tr|B3H6U1|B3H6U1_ARATH Uncharacterized protein At5g32440.2 OS=Ar... 76 2e-12 tr|B6TIC6|B6TIC6_MAIZE CUE domain containing protein OS=Zea mays... 74 1e-11 tr|B4FYB7|B4FYB7_MAIZE Putative uncharacterized protein OS=Zea m... 70 9e-11 tr|B6TCB4|B6TCB4_MAIZE CUE domain containing protein OS=Zea mays... 69 3e-10 tr|Q67WV6|Q67WV6_ORYSJ Os06g0642900 protein OS=Oryza sativa subs... 67 1e-09 tr|A3A3V8|A3A3V8_ORYSJ Putative uncharacterized protein OS=Oryza... 65 5e-09 tr|A2X1Q4|A2X1Q4_ORYSI Putative uncharacterized protein OS=Oryza... 65 5e-09 tr|B6T3P8|B6T3P8_MAIZE CUE domain containing protein OS=Zea mays... 60 1e-07 tr|B4G1V5|B4G1V5_MAIZE Putative uncharacterized protein OS=Zea m... 59 4e-07 tr|Q6UUK2|Q6UUK2_ORYSJ Putative uncharacterized protein (Putativ... 54 1e-05 tr|Q0E3B5|Q0E3B5_ORYSJ Os02g0184500 protein OS=Oryza sativa subs... 52 3e-05 tr|A7PNK4|A7PNK4_VITVI Chromosome chr8 scaffold_23, whole genome... 52 3e-05 tr|Q6H880|Q6H880_ORYSJ Putative uncharacterized protein OJ1572_F... 51 8e-05 tr|B8B0S4|B8B0S4_ORYSI Putative uncharacterized protein OS=Oryza... 50 1e-04 tr|A7QIK9|A7QIK9_VITVI Chromosome chr9 scaffold_104, whole genom... 44 0.012 tr|A5B8J1|A5B8J1_VITVI Putative uncharacterized protein OS=Vitis... 44 0.012 tr|Q0J3G0|Q0J3G0_ORYSJ Os09g0119100 protein OS=Oryza sativa subs... 39 0.30 tr|A3BW42|A3BW42_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.30 tr|A2YYJ3|A2YYJ3_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.30 tr|Q67WV8|Q67WV8_ORYSJ Putative uncharacterized protein P0416A11... 37 0.86 tr|Q0DAN6|Q0DAN6_ORYSJ Os06g0642600 protein OS=Oryza sativa subs... 37 0.86 tr|B8B0S3|B8B0S3_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.86
>tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 289
Score = 91.3 bits (225), Expect = 5e-17 Identities = 50/103 (48%), Positives = 64/103 (62%), Gaps = 2/103 (1%) Frame = +3
Query: 219 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 392 MSA+VCGKRSLF+++H PPI KRLRC G SP+RF++ + + Sbjct: 1 MSALVCGKRSLFEDLHTPPPISKRLRCSGSNSPIRFSANSPTRSPTATDIHHQNQSTEIH 60
Query: 393 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSD 521 R LFP+MD Q +E VLES GN+L SAI+SLNELRL + Sbjct: 61 HLSQLRGLFPDMDEQHLEAVLESCGNDLASAIKSLNELRLGRE 103
>tr|A7PF87|A7PF87_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016953001 PE=4 SV=1 Length = 283
Score = 90.9 bits (224), Expect = 7e-17 Identities = 63/157 (40%), Positives = 85/157 (54%), Gaps = 7/157 (4%) Frame = +3
Query: 219 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 392 MSA+VCGKRS F+++ PP+ KR+RC +SPVRF+ RS + + + Sbjct: 1 MSAIVCGKRSFFEDLPTTPPVSKRIRCSS-SSPVRFSPPRS---ISASPSQSQSTASQAS 56
Query: 393 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSAPNL 572 R LFP+MD Q +EK LE GN+LDS I+SLNELRL S N L F S L Sbjct: 57 VLDHLRALFPDMDKQFLEKALEECGNDLDSTIKSLNELRLGS--AQNNLGFGAGTSDVGL 114
Query: 573 ----TLGQEGVANQSAVLNAVEVDKANQGQS-EGSEW 668 L +GVA + + + E A + S +G+EW Sbjct: 115 ETKVQLQSQGVAATNGEVVSSEDPSAPKNLSMDGAEW 151
>tr|A9PBC1|A9PBC1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 286
Score = 87.8 bits (216), Expect = 6e-16 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 10/160 (6%) Frame = +3
Query: 219 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 389 MSA+VCGKRS F+E+ PP+ KR+RC +SPVRF+ RS + + + Sbjct: 1 MSAIVCGKRSFFEELTVTSPPVSKRIRCSS-SSPVRFSPPRSNTLASNPPSFNFGSSSSS 59
Query: 390 XXXXXXR--TLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSS----DVVANALNFSN 551 + +FP+MD QLIEKVLE G++LDSAIRSLN+LRL S A+ + + Sbjct: 60 SSTLIEQLAAIFPDMDKQLIEKVLEECGDDLDSAIRSLNDLRLGSAENFSAAADKSDVID 119
Query: 552 DNSAPNLTLGQEGVANQSAVLNAVEVDKANQGQS-EGSEW 668 +++ P +GVA A E A+ S +G+EW Sbjct: 120 ESNVP-----AQGVATTGAEAPPTEDLSASAHLSLDGAEW 154
>tr|A9T5N7|A9T5N7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191879 PE=4 SV=1 Length = 287
Score = 87.4 bits (215), Expect = 7e-16 Identities = 63/157 (40%), Positives = 83/157 (52%), Gaps = 7/157 (4%) Frame = +3
Query: 219 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 392 MSA VCGKRSLF+++ PPI KRLR G SP+ FAS S P GS + Sbjct: 1 MSAAVCGKRSLFEDLRSSPPISKRLRFAQGNSPIWFASATSSPPSGSSPS-FEPRLEAGL 59
Query: 393 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSN---DNSA 563 LFP+M+ Q +EKVLE+S N+LD AI+SLN LRL S A + S+ Sbjct: 60 LLSQLHALFPDMEEQAVEKVLEASNNDLDYAIKSLNLLRLYSSQQATPPHPDEKDASGSS 119
Query: 564 PNLTLGQEGV-ANQSAVLNAVEVDKANQG-QSEGSEW 668 P+L+ + +S + E + N QSEG +W Sbjct: 120 PSLSSFPSRLDEGRSQQVQQQEAEYTNSTVQSEGVKW 156
>tr|A9U3T0|A9U3T0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228060 PE=4 SV=1 Length = 285
Score = 85.5 bits (210), Expect = 3e-15 Identities = 61/156 (39%), Positives = 79/156 (50%), Gaps = 6/156 (3%) Frame = +3
Query: 219 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 392 MSA VCGKRSLF+++H PP KRLR G SP+ FA+ S P GS Sbjct: 1 MSAAVCGKRSLFEDLHCSPPTSKRLRFAQGNSPLWFATATSTPPSGSSPC-FELRPEADL 59
Query: 393 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSA--- 563 LFP+M+ ++EKVL +S N+LD AI+SLN LRLSS A A +D A Sbjct: 60 LLSQLHALFPDMEEHVVEKVLGASNNDLDYAIKSLNLLRLSSSQQA-ATTLPSDQDATVL 118
Query: 564 -PNLTLGQEGVANQSAVLNAVEVDKANQGQSEGSEW 668 P L + + S ++ QSEG +W Sbjct: 119 CPPLPIFSDCPDELSMQQQQQAESTSSPVQSEGGKW 154
>tr|A9PHI2|A9PHI2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 285
Score = 82.4 bits (202), Expect = 2e-14 Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 6/106 (5%) Frame = +3
Query: 219 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 389 MSA+VCGKRS F+E+ PP+ KR+RC +SPVRF+ RS + + S A Sbjct: 1 MSAIVCGKRSFFEELTVTSPPVSKRIRCSS-SSPVRFSPPRSNT-IASNPASFNFSSSSS 58
Query: 390 XXXXXXRTL---FPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSS 518 L FP+MD QL+EK LE G++LD AIRSLNELRL+S Sbjct: 59 SSSAFVEQLAAIFPDMDKQLLEKALEECGDDLDLAIRSLNELRLAS 104
>tr|Q94K99|Q94K99_ARATH Putative uncharacterized protein At5g32440 OS=Arabidopsis thaliana GN=At5g32440 PE=2 SV=1 Length = 264
Score = 76.3 bits (186), Expect = 2e-12 Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 9/159 (5%) Frame = +3
Query: 219 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 389 MSA+VCGKRSLF+++ PP+ K+LRC +S RF+ P+ + Sbjct: 1 MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP-----PIPPSSS--------- 46
Query: 390 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSA-- 563 +FP+MD Q++E+ +E G++LDSAIR LN+LRL S AN + S N + Sbjct: 47 LLLDHLAAIFPDMDRQILERAIEECGDDLDSAIRCLNQLRLES---ANKNSDSATNQSPV 103
Query: 564 ----PNLTLGQEGVANQSAVLNAVEVDKANQGQSEGSEW 668 PN+ Q+G A + N + +D G+EW Sbjct: 104 VIQEPNVEPQQQGSAKEEP--NVLNLD--------GTEW 132
>tr|Q8H1Q3|Q8H1Q3_ARATH Putative uncharacterized protein At5g32440 OS=Arabidopsis thaliana GN=At5g32440 PE=2 SV=1 Length = 264
Score = 76.3 bits (186), Expect = 2e-12 Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 9/159 (5%) Frame = +3
Query: 219 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 389 MSA+VCGKRSLF+++ PP+ K+LRC +S RF+ P+ + Sbjct: 1 MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP-----PIPPSSS--------- 46
Query: 390 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSA-- 563 +FP+MD Q++E+ +E G++LDSAIR LN+LRL S AN + S N + Sbjct: 47 LLLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLES---ANKNSDSATNQSPV 103
Query: 564 ----PNLTLGQEGVANQSAVLNAVEVDKANQGQSEGSEW 668 PN+ Q+G A + N + +D G+EW Sbjct: 104 VIQEPNVEPQQQGSAKEEP--NVLNLD--------GTEW 132
>tr|B3H6U1|B3H6U1_ARATH Uncharacterized protein At5g32440.2 OS=Arabidopsis thaliana GN=At5g32440 PE=4 SV=1 Length = 187
Score = 76.3 bits (186), Expect = 2e-12 Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 9/159 (5%) Frame = +3
Query: 219 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 389 MSA+VCGKRSLF+++ PP+ K+LRC +S RF+ P+ + Sbjct: 1 MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP-----PIPPSSS--------- 46
Query: 390 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRLSSDVVANALNFSNDNSA-- 563 +FP+MD Q++E+ +E G++LDSAIR LN+LRL S AN + S N + Sbjct: 47 LLLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLES---ANKNSDSATNQSPV 103
Query: 564 ----PNLTLGQEGVANQSAVLNAVEVDKANQGQSEGSEW 668 PN+ Q+G A + N + +D G+EW Sbjct: 104 VIQEPNVEPQQQGSAKEEP--NVLNLD--------GTEW 132
>tr|B6TIC6|B6TIC6_MAIZE CUE domain containing protein OS=Zea mays PE=2 SV=1 Length = 282
Score = 73.6 bits (179), Expect = 1e-11 Identities = 60/158 (37%), Positives = 81/158 (51%), Gaps = 8/158 (5%) Frame = +3
Query: 219 MSAVVCGKRS---LFDEIHPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 389 MSAVVCGKRS DE+ PP P +P R S RS S GS + Sbjct: 1 MSAVVCGKRSSSIFADELLPPSPTSPHSSHQPAPKR--SRRSPSHRGSSDGHRREALVHH 58
Query: 390 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL-SSDVVANALNFSNDNSAP 566 LFP+MD QL+EK LE+SG++LDSAI+SLN LRL S++ + ++ F ++N Sbjct: 59 LLL-----LFPDMDPQLLEKALEASGDDLDSAIKSLNLLRLESAEAILSSTGFKSENGQH 113
Query: 567 N-LTLGQEGVAN---QSAVLNAVEVDKANQGQSEGSEW 668 + EG++N + + VD Q GSEW Sbjct: 114 TAIQPAVEGISNGGVDTTTEHHPTVDN-YQTSKNGSEW 150
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