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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948238
Clone id TST38A01NGRL0002_M16
Library
Length 659
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_M16. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TCTGCAGACCCAGAGACATTCTCCAAGAACAGGGAGCTCGAGGTGATTCACGCGAGATGG
GCAATGCTCGGCGCCCTGGGGTGTGTGACCCCCGAGTTGCTAGCCAAGAACGGGGTGAAA
TTCGGAGAGGCAGTGTGGTTCAAGGCCGGCTCCCAGATCTTCGCCGACGGCGGTCTTGAC
TACCTGGGCAACCCCAGCCTTGTGCACGCTCAGAGCATTCTGGCCATCTGGGCCTGCCAA
GTGGTTCTCATGGGTGCCGTTGAAGGCTACAGAGTGGGCGGCGGCCCTCTTGGAGAGGGC
CTAGACCCTGTCTACCCAGGCGGTGCCTTCGACCCCTTGGGTCTGGCTGACGACCCCGAC
TCCTTCGCTGAGCTGAAGGTTAAGGAAATCAAGAACGGCCGGCTGGCCATGTTCTCCATG
TTCGGCTTCTTCGTCCAGGCCATCGTCACAGGCAAGGGCCCGATCGAGAACTTGTCCGAC
CATTTGGCCGACCCCACTGTCAACAACGCATGGGCTTACGCCACCAACTTCACACCCGGC
AAGTGAGAGGCAGCACCCCTATTTTCCGCACTCCCCCATCTCCCACTAGCTACTGTAAAC
ATTTGAGAATAACTGTAACTAAATTTACTCTTGTCTCTAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 181
Score (bit) 354.0
E-value 2.0e-97
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948238|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_M16, 5'
         (638 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   354   2e-97
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   351   2e-96
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   345   1e-94
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   343   4e-94
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   343   6e-94
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   342   7e-94
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   342   7e-94
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   342   7e-94
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   342   1e-93
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   342   1e-93
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   342   1e-93
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   341   2e-93
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   341   2e-93
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   341   2e-93
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   341   2e-93
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   341   2e-93
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   340   3e-93
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   340   3e-93
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   340   4e-93
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   340   4e-93
sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty...   340   4e-93
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   340   4e-93
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   340   5e-93
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   340   5e-93
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   340   5e-93
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   340   5e-93
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   339   6e-93
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   339   8e-93
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   338   1e-92
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   338   2e-92

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  354 bits (909), Expect = 2e-97
 Identities = 168/181 (92%), Positives = 177/181 (97%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFA+GGLD
Sbjct: 85  SADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLD 144

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNPSLVHAQSILAIWACQV+LMGAVEGYRV GGPLGE  DP+YPGG+FDPLGLADDP+
Sbjct: 145 YLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPE 204

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADP VNNAWAYATNFTPG
Sbjct: 205 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPG 264

Query: 541 K 543
           K
Sbjct: 265 K 265


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  351 bits (900), Expect = 2e-96
 Identities = 165/181 (91%), Positives = 174/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKAGSQIF++GGLD
Sbjct: 85  SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLD 144

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDP+YPGGAFDPLGLADDPD
Sbjct: 145 YLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPD 204

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADP  NNAWAYATNF PG
Sbjct: 205 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPG 264

Query: 541 K 543
           K
Sbjct: 265 K 265


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  345 bits (884), Expect = 1e-94
 Identities = 162/181 (89%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKAGSQIF++GGLD
Sbjct: 85  SADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLD 144

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGAFDPLGLADDP+
Sbjct: 145 YLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPE 204

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDH+ DP  NNAWAYATNF PG
Sbjct: 205 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPG 264

Query: 541 K 543
           K
Sbjct: 265 K 265


>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R,
           chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1
          Length = 267

 Score =  343 bits (880), Expect = 4e-94
 Identities = 162/181 (89%), Positives = 174/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLD
Sbjct: 87  SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLD 146

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNPSLVHAQSILAIWACQVVLMGAVEGYRV GGPLGE +DP+YPGG+FDPLGLADDP+
Sbjct: 147 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPE 206

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  NNAW+YATNF PG
Sbjct: 207 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 266

Query: 541 K 543
           K
Sbjct: 267 K 267


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  343 bits (879), Expect = 6e-94
 Identities = 162/181 (89%), Positives = 174/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLD
Sbjct: 87  SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLD 146

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNPSLVHAQSILAIWACQVVLMGAVEGYRV GGPLGE +DP+YPGG+FDPLGLA+DP+
Sbjct: 147 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPE 206

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  NNAWAYATNF PG
Sbjct: 207 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 266

Query: 541 K 543
           K
Sbjct: 267 K 267


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  342 bits (878), Expect = 7e-94
 Identities = 161/181 (88%), Positives = 174/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLD
Sbjct: 87  SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLD 146

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNPSLVHAQSILAIWACQVVLMGAVEGYR+ GGPLGE +DP+YPGG+FDPLGLADDP+
Sbjct: 147 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPE 206

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  NNAWA+ATNF PG
Sbjct: 207 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 266

Query: 541 K 543
           K
Sbjct: 267 K 267


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  342 bits (878), Expect = 7e-94
 Identities = 161/181 (88%), Positives = 174/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLD
Sbjct: 85  SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLD 144

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNPSLVHAQSILAIWACQV+LMGAVEGYRV GGPLGE +DP+YPGG+FDPLGLA+DP+
Sbjct: 145 YLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPE 204

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  NNAWAYATNF PG
Sbjct: 205 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264

Query: 541 K 543
           K
Sbjct: 265 K 265


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  342 bits (878), Expect = 7e-94
 Identities = 160/181 (88%), Positives = 174/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLD
Sbjct: 75  SADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD 134

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNPSLVHAQSILAIWACQVVLMGAVEGYR+ GGPLGE  DP+YPGG+FDPLGLADDP+
Sbjct: 135 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPE 194

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  NNAWAYATNF PG
Sbjct: 195 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 254

Query: 541 K 543
           K
Sbjct: 255 K 255


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  342 bits (877), Expect = 1e-93
 Identities = 159/181 (87%), Positives = 175/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWFKAG+QIF++GGLD
Sbjct: 84  SADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLD 143

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPGGAFDPLGLADDP+
Sbjct: 144 YLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPE 203

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP  NNAWA+ATNF PG
Sbjct: 204 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPG 263

Query: 541 K 543
           K
Sbjct: 264 K 264


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
           chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
          Length = 266

 Score =  342 bits (876), Expect = 1e-93
 Identities = 161/181 (88%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PEL A+NGVKFGEAVWFKAGSQIF++GGLD
Sbjct: 86  SADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLD 145

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNPSLVHAQSILAIWACQVVLMGAVEGYRV GGPLGE +DP+YPGG+FDPLGLADDP+
Sbjct: 146 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPE 205

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  NNAWA+ATNF PG
Sbjct: 206 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 265

Query: 541 K 543
           K
Sbjct: 266 K 266
tr_hit_id Q8RVI4
Definition tr|Q8RVI4|Q8RVI4_PINPS Putative chlorophyll A-B binding protein type I (Fragment) OS=Pinus pinaster
Align length 181
Score (bit) 351.0
E-value 2.0e-95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948238|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_M16, 5'
         (638 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8RVI4|Q8RVI4_PINPS Putative chlorophyll A-B binding protein ...   351   2e-95
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   350   5e-95
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   348   1e-94
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   348   2e-94
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   348   2e-94
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   348   2e-94
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   347   3e-94
tr|Q40934|Q40934_PSEMZ Light-harvesting chlorophyll a/b binding ...   347   5e-94
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   346   6e-94
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   346   8e-94
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   346   8e-94
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   346   8e-94
tr|Q93XK4|Q93XK4_PINCO Chlorophyll a/b binding protein OS=Pinus ...   345   1e-93
tr|Q5PYQ1|Q5PYQ1_MANES Chloroplast chlorophyll A/B binding prote...   345   1e-93
tr|Q40788|Q40788_PINCO Chlorophyll a/b binding protein OS=Pinus ...   345   1e-93
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   345   1e-93
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   345   1e-93
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   345   1e-93
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   345   1e-93
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   345   1e-93
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   345   2e-93
tr|Q41234|Q41234_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   345   2e-93
tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding...   345   2e-93
tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding...   345   2e-93
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   345   2e-93
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   344   2e-93
tr|O64448|O64448_NICSY Light harvesting chlorophyll a/b-binding ...   344   2e-93
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   344   3e-93
tr|B4G143|B4G143_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   344   3e-93
tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea...   344   3e-93

>tr|Q8RVI4|Q8RVI4_PINPS Putative chlorophyll A-B binding protein
           type I (Fragment) OS=Pinus pinaster PE=2 SV=1
          Length = 195

 Score =  351 bits (901), Expect = 2e-95
 Identities = 165/181 (91%), Positives = 175/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWFKAG+QIF++GGLD
Sbjct: 15  SADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLD 74

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPGGAFDPLGLADDP+
Sbjct: 75  YLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPE 134

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPT NNAWAYATNF PG
Sbjct: 135 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPTANNAWAYATNFVPG 194

Query: 541 K 543
           K
Sbjct: 195 K 195


>tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll
           a/b-binding polypeptide (Fragment) OS=Pinus palustris
           GN=Lhcb2 PE=2 SV=1
          Length = 246

 Score =  350 bits (897), Expect = 5e-95
 Identities = 164/181 (90%), Positives = 175/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH+RWAMLGALGCV PELLAKNGVKFGEAVWFKAG+QIF++GGLD
Sbjct: 66  SADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLD 125

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPGGAFDPLGLADDP+
Sbjct: 126 YLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPE 185

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADP  NNAWAYATNF PG
Sbjct: 186 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPG 245

Query: 541 K 543
           K
Sbjct: 246 K 246


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  348 bits (894), Expect = 1e-94
 Identities = 163/180 (90%), Positives = 175/180 (97%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           S+DPETF++NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG+QIF++GGLD
Sbjct: 83  SSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQIFSEGGLD 142

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNPSLVHAQSILAIWACQV+LMGAVEGYRV GGPLGE  DP+YPGG+FDPLGLADDPD
Sbjct: 143 YLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPD 202

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  NNAWAYATNFTPG
Sbjct: 203 TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 262


>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  348 bits (893), Expect = 2e-94
 Identities = 163/181 (90%), Positives = 174/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWFKAG+QIF++GGLD
Sbjct: 86  SADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWFKAGAQIFSEGGLD 145

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPGGAFDPLGLADDP+
Sbjct: 146 YLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPE 205

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADP  NNAWAYATNF PG
Sbjct: 206 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPG 265

Query: 541 K 543
           K
Sbjct: 266 K 266


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  348 bits (892), Expect = 2e-94
 Identities = 162/181 (89%), Positives = 174/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAGSQIF +GGLD
Sbjct: 84  SADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFQEGGLD 143

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD +YPGGAFDPLGLADDPD
Sbjct: 144 YLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPD 203

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADP  NNAWAYATNF PG
Sbjct: 204 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFVPG 263

Query: 541 K 543
           K
Sbjct: 264 K 264


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  348 bits (892), Expect = 2e-94
 Identities = 164/181 (90%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWFKAG+QIF++GGLD
Sbjct: 84  SADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLD 143

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGAFDPLGLADDPD
Sbjct: 144 YLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGLADDPD 203

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADP  NNAWAYATNF PG
Sbjct: 204 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPG 263

Query: 541 K 543
           K
Sbjct: 264 K 264


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  347 bits (890), Expect = 3e-94
 Identities = 164/181 (90%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++GGLD
Sbjct: 85  SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLD 144

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGAFDPLGLADDPD
Sbjct: 145 YLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGLADDPD 204

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADP  NNAWAYATNF PG
Sbjct: 205 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVANNAWAYATNFVPG 264

Query: 541 K 543
           K
Sbjct: 265 K 265


>tr|Q40934|Q40934_PSEMZ Light-harvesting chlorophyll a/b binding
           protein of photosystem II (Fragment) OS=Pseudotsuga
           menziesii PE=2 SV=1
          Length = 234

 Score =  347 bits (889), Expect = 5e-94
 Identities = 163/181 (90%), Positives = 175/181 (96%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH+RWAMLGALGCV PELLAKNGVKFGEAVWFKAG+QIF++GGLD
Sbjct: 54  SADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLD 113

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPGGAFDPLGLADDP+
Sbjct: 114 YLGNPNLIHAQSILAIWAFQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPE 173

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPT NNAWAYATNF PG
Sbjct: 174 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPG 233

Query: 541 K 543
           K
Sbjct: 234 K 234


>tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 266

 Score =  346 bits (888), Expect = 6e-94
 Identities = 164/181 (90%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           SADPETF+KNRELEVIH RWAMLGALGCV PELLAK GVKFGEAVWFKAG+QIF++GGLD
Sbjct: 86  SADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLD 145

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPGGAFDPLGLADDP+
Sbjct: 146 YLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPE 205

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPT NNAWAYATNF PG
Sbjct: 206 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPTANNAWAYATNFVPG 265

Query: 541 K 543
           K
Sbjct: 266 K 266


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  346 bits (887), Expect = 8e-94
 Identities = 162/180 (90%), Positives = 175/180 (97%)
 Frame = +1

Query: 1   SADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLD 180
           S+DPETF++NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+QIF++GGLD
Sbjct: 87  SSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLD 146

Query: 181 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLADDPD 360
           YLGNPSLVHAQSILAIWACQVVLMGAVEGYRV GGPLGE  DP+YPGG+FDPLGLADDPD
Sbjct: 147 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPD 206

Query: 361 SFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPG 540
           +FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  NNAWAYATNFTPG
Sbjct: 207 TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 266