DK948239 |
Clone id |
TST38A01NGRL0002_M17 |
Library |
TST38 |
Length |
679 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_M17. 5' end sequence. |
Accession |
DK948239 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1001Contig1 |
Sequence |
ATCCCTCCTCTCCTCTTTCAAAAGAGGCAAAACCGCGCAGCCCGCCGGACACCGTGCTCT TGCCGACGACGTAGGTGCCTCTGCGACGACGTACTACAGCAATATGAGCAGCAATGGCAA TGTTGGCAGTGGCACGTACTCTGAGCTGAATGAGGGCATTGCCCATTTCTACGACGCCTC GTCCGGAGTATGGGAAGACATTTGGGGGGAGCATATGCATCATGGCTATTACGACCCCGG CGCCCCCCTCAAAGCCGACCACAAGCAGGCACAAATCCGCATGATCGAAGAGAGCCTCAA GTGGGCTGGAATAAGTGAGGACAGCGGCAATCTGCAGAAAATCATTGATGTTGGCTGCGG CATTGGCGGCAGTTCTCGACATCTTGCTCGGAAGTATGGCGCAGAAGTCGTCGGGATTAC ATTGAGCCCGCAACAAGCCAAGAGAGCGACTCGGCTTACCGCTGATGCAGGTCTTTCTTC TCAGGTCAGTTTCCAGGTTGCCGACGCATTGAACCAACCCTTCCCCGACGGCCATTTCGA CTTTGTGTGGTCTATGGAGAGTGGGGAGCATATGCCTGATAAGGAGAAGTTCATGTCAGA ATTGGTGCGTGTCACGAAGCCNGGCGGTCAGATACTCATTGTGACATGGTGTCATCGGGA GTTGTCATCTGGGCGAGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZSK1 |
Definition |
sp|Q9ZSK1|GTOMC_ARATH Tocopherol O-methyltransferase, chloroplastic OS=Arabidopsis thaliana |
Align length |
181 |
Score (bit) |
250.0 |
E-value |
6.0e-66 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q1PBH5 |
Definition |
tr|Q1PBH5|Q1PBH5_GOSHI Gamma-tocopherol methyltransferase OS=Gossypium hirsutum |
Align length |
219 |
Score (bit) |
264.0 |
E-value |
3.0e-69 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948239|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0002_M17, 5' (679 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q1PBH5|Q1PBH5_GOSHI Gamma-tocopherol methyltransferase OS=Gos... 264 3e-69 tr|Q8GZS9|Q8GZS9_BRAOL Gamma-tocopherol methyltransferase OS=Bra... 257 5e-67 tr|Q1HBJ5|Q1HBJ5_BRANA Gamma-tocopherol methyltransferase OS=Bra... 257 5e-67 tr|B2ZC80|B2ZC80_BRANA Gamma-tocopherol methyltransferase OS=Bra... 257 5e-67 tr|B7U5G1|B7U5G1_BRANA Gamma-tocopherol methyltransferase (Fragm... 255 2e-66 tr|B2ZC77|B2ZC77_BRANA Gamma-tocopherol methyltransferase OS=Bra... 255 2e-66 tr|A9NSL2|A9NSL2_PICSI Putative uncharacterized protein OS=Picea... 254 3e-66 tr|A7PB57|A7PB57_VITVI Chromosome chr16 scaffold_10, whole genom... 254 3e-66 tr|B7U5F9|B7U5F9_BRANA Gamma-tocopherol methyltransferase (Fragm... 254 5e-66 tr|Q0GGW4|Q0GGW4_BRAJU Gamma-tocopherol methyl transferase OS=Br... 253 6e-66 tr|B7U5G0|B7U5G0_BRANA Gamma-tocopherol methyltransferase (Fragm... 253 8e-66 tr|B2ZC78|B2ZC78_BRANA Gamma-tocopherol methyltransferase OS=Bra... 251 2e-65 tr|B2ZC79|B2ZC79_BRANA Gamma-tocopherol methyltransferase OS=Bra... 250 5e-65 tr|Q1PBH9|Q1PBH9_SOLLC Gamma-tocopherol methyltransferase OS=Sol... 249 9e-65 tr|Q2XV91|Q2XV91_HELAN Gamma-tocopherol methyltransferase OS=Hel... 249 1e-64 tr|Q1PBH8|Q1PBH8_SOLTU Gamma-tocopherol methyltransferase OS=Sol... 249 1e-64 tr|Q2XV92|Q2XV92_HELAN Gamma-tocopherol methyltransferase OS=Hel... 249 1e-64 tr|Q2XV95|Q2XV95_HELAN Gamma-tocopherol methyltransferase OS=Hel... 248 3e-64 tr|B7FHY7|B7FHY7_MEDTR Putative uncharacterized protein OS=Medic... 247 6e-64 tr|Q2L7C6|Q2L7C6_ARATH Gamma-tocopherol methyltransferase OS=Ara... 246 7e-64 tr|Q2XV96|Q2XV96_HELAN Gamma-tocopherol methyltransferase OS=Hel... 246 1e-63 tr|A2X8N2|A2X8N2_ORYSI Putative uncharacterized protein OS=Oryza... 246 1e-63 tr|Q6ZIK0|Q6ZIK0_ORYSJ Os02g0701600 protein OS=Oryza sativa subs... 246 1e-63 tr|Q1PBH7|Q1PBH7_ORYSA Gamma-tocopherol methyltransferase OS=Ory... 246 1e-63 tr|A7LP02|A7LP02_ELAOL Gamma-tocopherol methyltransferase (Fragm... 246 1e-63 tr|A3AAG5|A3AAG5_ORYSJ Putative uncharacterized protein OS=Oryza... 246 1e-63 tr|Q4U3Z5|Q4U3Z5_LOTJA Gamma-tocopherol methyltransferase OS=Lot... 244 5e-63 tr|B6TCU3|B6TCU3_MAIZE Tocopherol O-methyltransferase OS=Zea may... 244 5e-63 tr|A7WK66|A7WK66_WHEAT Gamma-tocopherol methyl transferase OS=Tr... 243 6e-63 tr|Q1PBH6|Q1PBH6_MAIZE Gamma-tocopherol methyltransferase (Putat... 243 8e-63
>tr|Q1PBH5|Q1PBH5_GOSHI Gamma-tocopherol methyltransferase OS=Gossypium hirsutum GN=TMT PE=2 SV=1 Length = 344
Score = 264 bits (675), Expect = 3e-69 Identities = 134/219 (61%), Positives = 159/219 (72%), Gaps = 2/219 (0%) Frame = +2
Query: 14 SFKRGKTAQPAGHRALADDVGASATTYYXXXXXXXXXXXXTYSELNEGIAHFYDASSGVW 193 SF + P+ R+L+ V A+A++ + + L EGIA FYD SSG+W Sbjct: 28 SFPSSSRSFPSSRRSLSAHVKAAASSL-------------STTTLQEGIAEFYDQSSGIW 74
Query: 194 EDIWGEHMHHGYYDPGAPLK-ADHKQAQIRMIEESLKWAGISEDSGNLQK-IIDVGCGIG 367 EDIWG+HMHHGYYDP + + +DH AQIRMIEESL++AGI+ED N K I+DVGCGIG Sbjct: 75 EDIWGDHMHHGYYDPDSNVSGSDHPAAQIRMIEESLRFAGITEDPANKPKTIVDVGCGIG 134
Query: 368 GSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQVSFQVADALNQPFPDGHFDFV 547 GSSR+LARKYGA+ GITLSP QA RA L D GL+ +VSFQVADALNQPFPD FD V Sbjct: 135 GSSRYLARKYGAKCQGITLSPVQAGRANALAKDQGLADKVSFQVADALNQPFPDDQFDLV 194
Query: 548 WSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHREL 664 WSMESGEHMPDK KF+ EL RV PGG I+IVTWCHR+L Sbjct: 195 WSMESGEHMPDKPKFVKELARVAAPGGTIIIVTWCHRDL 233
>tr|Q8GZS9|Q8GZS9_BRAOL Gamma-tocopherol methyltransferase OS=Brassica oleracea GN=TMT PE=2 SV=1 Length = 347
Score = 257 bits (656), Expect = 5e-67 Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 3/179 (1%) Frame = +2
Query: 146 LNEGIAHFYDASSGVWEDIWGEHMHHGYYDPGAPLK---ADHKQAQIRMIEESLKWAGIS 316 L EGIA FY+ +SG+WE+IWG+HMHHG+YDP + ++ + H++AQIRMIEESL++AG++ Sbjct: 61 LREGIAEFYNETSGLWEEIWGDHMHHGFYDPDSSVQLSDSGHREAQIRMIEESLRFAGVT 120
Query: 317 EDSGNLQKIIDVGCGIGGSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQVSFQ 496 E+ +++++DVGCGIGGSSR++A K+GAE +GITLSP QAKRA L A LS +VSFQ Sbjct: 121 EEEKKIKRVVDVGCGIGGSSRYIASKFGAECIGITLSPVQAKRANDLAAAQSLSHKVSFQ 180
Query: 497 VADALNQPFPDGHFDFVWSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHRELSSG 673 VADAL+QPF DG FD VWSMESGEHMPDK KF+ ELVRVT PGG+I+IVTWCHR LS G Sbjct: 181 VADALDQPFEDGIFDLVWSMESGEHMPDKAKFVKELVRVTAPGGRIIIVTWCHRNLSQG 239
>tr|Q1HBJ5|Q1HBJ5_BRANA Gamma-tocopherol methyltransferase OS=Brassica napus GN=TMT PE=2 SV=1 Length = 347
Score = 257 bits (656), Expect = 5e-67 Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 3/179 (1%) Frame = +2
Query: 146 LNEGIAHFYDASSGVWEDIWGEHMHHGYYDPGAPLK---ADHKQAQIRMIEESLKWAGIS 316 L EGIA FY+ +SG+WE+IWG+HMHHG+YDP + ++ + H++AQIRMIEESL++AG++ Sbjct: 61 LREGIAEFYNETSGLWEEIWGDHMHHGFYDPDSSVQLSDSGHREAQIRMIEESLRFAGVT 120
Query: 317 EDSGNLQKIIDVGCGIGGSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQVSFQ 496 E+ +++++DVGCGIGGSSR++A K+GAE +GITLSP QAKRA L A LS +VSFQ Sbjct: 121 EEEKKIKRVVDVGCGIGGSSRYIASKFGAECIGITLSPVQAKRANDLAAAQSLSHKVSFQ 180
Query: 497 VADALNQPFPDGHFDFVWSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHRELSSG 673 VADAL+QPF DG FD VWSMESGEHMPDK KF+ ELVRVT PGG+I+IVTWCHR LS G Sbjct: 181 VADALDQPFEDGIFDLVWSMESGEHMPDKAKFVKELVRVTAPGGRIIIVTWCHRNLSQG 239
>tr|B2ZC80|B2ZC80_BRANA Gamma-tocopherol methyltransferase OS=Brassica napus GN=VTE4-4 PE=2 SV=1 Length = 347
Score = 257 bits (656), Expect = 5e-67 Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 3/179 (1%) Frame = +2
Query: 146 LNEGIAHFYDASSGVWEDIWGEHMHHGYYDPGAPLK---ADHKQAQIRMIEESLKWAGIS 316 L EGIA FY+ +SG+WE+IWG+HMHHG+YDP + ++ + H++AQIRMIEESL++AG++ Sbjct: 61 LREGIAEFYNETSGLWEEIWGDHMHHGFYDPDSSVQLSDSGHREAQIRMIEESLRFAGVT 120
Query: 317 EDSGNLQKIIDVGCGIGGSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQVSFQ 496 E+ +++++DVGCGIGGSSR++A K+GAE +GITLSP QAKRA L A LS +VSFQ Sbjct: 121 EEEKKIKRVVDVGCGIGGSSRYIASKFGAECIGITLSPVQAKRANDLAAAQSLSHKVSFQ 180
Query: 497 VADALNQPFPDGHFDFVWSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHRELSSG 673 VADAL+QPF DG FD VWSMESGEHMPDK KF+ ELVRVT PGG+I+IVTWCHR LS G Sbjct: 181 VADALDQPFEDGIFDLVWSMESGEHMPDKAKFVKELVRVTAPGGRIIIVTWCHRNLSQG 239
>tr|B7U5G1|B7U5G1_BRANA Gamma-tocopherol methyltransferase (Fragment) OS=Brassica napus GN=VTE4 PE=4 SV=1 Length = 291
Score = 255 bits (652), Expect = 2e-66 Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 3/179 (1%) Frame = +2
Query: 146 LNEGIAHFYDASSGVWEDIWGEHMHHGYYDPGAPLK---ADHKQAQIRMIEESLKWAGIS 316 L EGIA FY+ +SG+WE+IWG+HMHHG+YDP + ++ + H++AQIRMIEESL++AG++ Sbjct: 37 LREGIAEFYNETSGLWEEIWGDHMHHGFYDPDSSVQLSDSGHREAQIRMIEESLRFAGVT 96
Query: 317 EDSGNLQKIIDVGCGIGGSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQVSFQ 496 E+ +++++DVGCGIGGSSR++A K+GAE +GITLSP QAKRA L LS +VSFQ Sbjct: 97 EEEKKIKRVVDVGCGIGGSSRYIASKFGAECIGITLSPVQAKRANDLATAQSLSHKVSFQ 156
Query: 497 VADALNQPFPDGHFDFVWSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHRELSSG 673 VADAL+QPF DG FD VWSMESGEHMPDK KF+ ELVRVT PGG+I+IVTWCHR LS G Sbjct: 157 VADALDQPFEDGIFDLVWSMESGEHMPDKAKFVKELVRVTAPGGRIIIVTWCHRNLSQG 215
>tr|B2ZC77|B2ZC77_BRANA Gamma-tocopherol methyltransferase OS=Brassica napus GN=VTE4-1 PE=2 SV=1 Length = 347
Score = 255 bits (652), Expect = 2e-66 Identities = 117/183 (63%), Positives = 149/183 (81%), Gaps = 3/183 (1%) Frame = +2
Query: 134 TYSELNEGIAHFYDASSGVWEDIWGEHMHHGYYDPGAPLK---ADHKQAQIRMIEESLKW 304 ++ L EGIA FY+ +SG+WE+IWG+HMHHG+YDP + ++ + H++AQIRMIEESL++ Sbjct: 57 SFEALREGIAEFYNETSGLWEEIWGDHMHHGFYDPDSSVQLSDSGHREAQIRMIEESLRF 116
Query: 305 AGISEDSGNLQKIIDVGCGIGGSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQ 484 AG++E+ +++++DVGCGIGGSSR++A K+GAE +GITLSP QAKRA L A LS + Sbjct: 117 AGVTEEEKKIKRVVDVGCGIGGSSRYIASKFGAECIGITLSPVQAKRANDLAAAQSLSHK 176
Query: 485 VSFQVADALNQPFPDGHFDFVWSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHREL 664 VSFQVADAL QPF DG FD VWSMESGEHMPDK KF+ ELVRV PGG+I+IVTWCHR L Sbjct: 177 VSFQVADALEQPFEDGIFDLVWSMESGEHMPDKAKFVKELVRVAAPGGRIIIVTWCHRNL 236
Query: 665 SSG 673 S G Sbjct: 237 SPG 239
>tr|A9NSL2|A9NSL2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 354
Score = 254 bits (650), Expect = 3e-66 Identities = 122/182 (67%), Positives = 144/182 (79%), Gaps = 2/182 (1%) Frame = +2
Query: 134 TYSELNEGIAHFYDASSGVWEDIWGEHMHHGYYDPGAPLK-ADHKQAQIRMIEESLKWAG 310 ++ +L GIA FYD SSGVWED+WG+HMHHG+YD P +H+ AQIRMIEE+L +A Sbjct: 65 SFGDLRSGIAEFYDESSGVWEDMWGDHMHHGFYDLPPPQNLVNHRDAQIRMIEETLSFAA 124
Query: 311 ISE-DSGNLQKIIDVGCGIGGSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQV 487 ISE D ++++D+GCGIGGSSR+LA+KYGA V GITLSP QA+RA LTA GLS +V Sbjct: 125 ISEEDFKKPRRVVDIGCGIGGSSRYLAKKYGAHVQGITLSPLQAQRAAALTASQGLSDKV 184
Query: 488 SFQVADALNQPFPDGHFDFVWSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHRELS 667 FQVADAL+QPFPDG FD VWSMESGEHMPDK KFM ELVRV PGG I+IVTWCHR+L Sbjct: 185 VFQVADALDQPFPDGQFDLVWSMESGEHMPDKVKFMQELVRVAAPGGSIIIVTWCHRDLL 244
Query: 668 SG 673 G Sbjct: 245 PG 246
>tr|A7PB57|A7PB57_VITVI Chromosome chr16 scaffold_10, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013955001 PE=4 SV=1 Length = 345
Score = 254 bits (650), Expect = 3e-66 Identities = 121/178 (67%), Positives = 145/178 (81%), Gaps = 2/178 (1%) Frame = +2
Query: 140 SELNEGIAHFYDASSGVWEDIWGEHMHHGYYDP-GAPLKADHKQAQIRMIEESLKWAGIS 316 + L +GIA YD SSG+WEDIWG+HMHHG+Y+P A ADH+ AQIRMIEESL++AG+S Sbjct: 58 ASLKKGIAELYDQSSGLWEDIWGDHMHHGFYEPDSAASDADHRFAQIRMIEESLRFAGVS 117
Query: 317 EDSGNLQK-IIDVGCGIGGSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQVSF 493 E+ K ++DVGCGIGGSSR+LA+KYGA GITLSP QA+RA L A GL+ +VSF Sbjct: 118 EEGEKRPKRVVDVGCGIGGSSRYLAKKYGASCQGITLSPLQAQRAQTLAASQGLADKVSF 177
Query: 494 QVADALNQPFPDGHFDFVWSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHRELS 667 QVADAL+QPFPDG FD VWSMESGEHMPDK+KF+SEL RV PGG I++VTWCHR+LS Sbjct: 178 QVADALDQPFPDGQFDLVWSMESGEHMPDKKKFVSELARVVAPGGTIILVTWCHRDLS 235
>tr|B7U5F9|B7U5F9_BRANA Gamma-tocopherol methyltransferase (Fragment) OS=Brassica napus GN=VTE4 PE=4 SV=1 Length = 300
Score = 254 bits (648), Expect = 5e-66 Identities = 116/183 (63%), Positives = 148/183 (80%), Gaps = 3/183 (1%) Frame = +2
Query: 134 TYSELNEGIAHFYDASSGVWEDIWGEHMHHGYYDPGAPLK---ADHKQAQIRMIEESLKW 304 ++ L EGIA FY+ +SG+WE+IWG+HMHHG+YDP + ++ + H++AQIRMIEESL++ Sbjct: 42 SFEALREGIAEFYNETSGLWEEIWGDHMHHGFYDPDSSVQLSDSGHREAQIRMIEESLRF 101
Query: 305 AGISEDSGNLQKIIDVGCGIGGSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQ 484 AG++E+ +++++DVGCGIGGSSR++A K+GAE +GITLSP QAKRA L LS + Sbjct: 102 AGVTEEEKKIKRVVDVGCGIGGSSRYIASKFGAECIGITLSPVQAKRANDLAXXQSLSHK 161
Query: 485 VSFQVADALNQPFPDGHFDFVWSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHREL 664 VSFQVADAL QPF DG FD VWSMESGEHMPDK KF+ ELVRV PGG+I+IVTWCHR L Sbjct: 162 VSFQVADALEQPFEDGIFDLVWSMESGEHMPDKAKFVKELVRVAAPGGRIIIVTWCHRNL 221
Query: 665 SSG 673 S G Sbjct: 222 SPG 224
>tr|Q0GGW4|Q0GGW4_BRAJU Gamma-tocopherol methyl transferase OS=Brassica juncea PE=2 SV=1 Length = 347
Score = 253 bits (647), Expect = 6e-66 Identities = 117/179 (65%), Positives = 147/179 (82%), Gaps = 3/179 (1%) Frame = +2
Query: 146 LNEGIAHFYDASSGVWEDIWGEHMHHGYYDPGAPLK---ADHKQAQIRMIEESLKWAGIS 316 L EGIA FY+ +SG+WE+IWG+HMHHG+YDP + ++ + H++AQIRMIEESL++AG++ Sbjct: 61 LREGIAEFYNETSGLWEEIWGDHMHHGFYDPDSSVQLSDSGHREAQIRMIEESLRFAGVT 120
Query: 317 EDSGNLQKIIDVGCGIGGSSRHLARKYGAEVVGITLSPQQAKRATRLTADAGLSSQVSFQ 496 E+ ++ ++DVGCGIGGSSR++A K+GAE +GITLSP QAKRA L LS +VSFQ Sbjct: 121 EEEKKIKIVVDVGCGIGGSSRYIASKFGAECIGITLSPVQAKRANDLATAQSLSHKVSFQ 180
Query: 497 VADALNQPFPDGHFDFVWSMESGEHMPDKEKFMSELVRVTKPGGQILIVTWCHRELSSG 673 VADAL+QPF DG FD VWSMESGEHMPDK KF+ ELVRVT PGG+I+IVTWCHR LS G Sbjct: 181 VADALDQPFEDGIFDLVWSMESGEHMPDKAKFVKELVRVTAPGGRIIIVTWCHRNLSQG 239
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