BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948307|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_P14, 5'
         (578 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01714|SP1_RAT Transcription factor Sp1 OS=Rattus norvegicus ...    31   5.1  
sp|Q3KQ80|CA201_XENLA UPF0490 protein C1orf201 homolog OS=Xenopu...    30   6.7  
sp|Q7KBL8|MED29_DROME Mediator of RNA polymerase II transcriptio...    30   8.7  

>sp|Q01714|SP1_RAT Transcription factor Sp1 OS=Rattus norvegicus
           GN=Sp1 PE=1 SV=2
          Length = 786

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 86  QVQFDDSKPVVLAPRENLLPTNSPEMLSLSNSNQSGKPGVVGEGEAGAR 232
           Q Q+  + PV L     LLP NS    +L+ S+Q+G     G  E+G++
Sbjct: 250 QTQYVTNVPVALNGNITLLPVNSVSAATLTPSSQAGTISSSGSQESGSQ 298


>sp|Q3KQ80|CA201_XENLA UPF0490 protein C1orf201 homolog OS=Xenopus
           laevis PE=2 SV=1
          Length = 352

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 22/76 (28%), Positives = 29/76 (38%)
 Frame = -3

Query: 348 SHRVIHYLCSYPIPAVRDPXXXXXXXXXXRTLSITHICFLAPASPSPTTPGFPD*FELDR 169
           S   ++ +   P PA  DP            L   ++CF APA P P  P  P     D 
Sbjct: 234 SRNSLNVISDNPGPASYDPYKSSESEKKIIFLRKHYLCFSAPAMPIPKAPPVPGPGHYDI 293

Query: 168 ESISGLFVGKRFSRGA 121
               GL   K++  GA
Sbjct: 294 VDYEGL--PKQYMSGA 307


>sp|Q7KBL8|MED29_DROME Mediator of RNA polymerase II transcription
           subunit 29 OS=Drosophila melanogaster GN=ix PE=1 SV=1
          Length = 188

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 125 PRENLLPTNSPEMLSLSNSNQSGKPGVV 208
           P  N++P + P+M+ +  S+ SG PG V
Sbjct: 3   PNMNMMPMSGPQMMQVMQSSPSGPPGPV 30

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948307|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_P14, 5'
         (578 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7TNM4|A7TNM4_VANPO Putative uncharacterized protein OS=Vande...    33   8.7  

>tr|A7TNM4|A7TNM4_VANPO Putative uncharacterized protein
           OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=Kpol_1070p24 PE=3 SV=1
          Length = 881

 Score = 33.5 bits (75), Expect = 8.7
 Identities = 20/46 (43%), Positives = 26/46 (56%)
 Frame = +2

Query: 83  TQVQFDDSKPVVLAPRENLLPTNSPEMLSLSNSNQSGKPGVVGEGE 220
           T+V F  SKP  L  + NLLPTNS E L  +NS +      +G+ E
Sbjct: 194 TKVNFSHSKP--LGKQNNLLPTNSNESLRANNSYERKSAPRLGKQE 237