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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948317
Clone id TST38A01NGRL0002_P24
Library
Length 681
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0002_P24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CCTTCCTCCTCTGCGTAACATTTTGTGAAGCGAGGGACGATCTGCCGTGAAAGGGAGGTC
GCCATGGCCGTCGTGGCATCGAAAGCTCTGTTGTCGTCCTCTCTCTCAACAACTACCGCT
CCAGCGACTACCTCGCCCGACTGTTCCCGCCAGCAATTCTTGGGCGGGAGGGCTCTCCGA
GCAGCGGGCCCCTCTTCTTCCTCCAAGCGCGCGTCCTCCTTCACCGTTCGCGCAACCGCC
GATAAGCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCTCCAAGCAAAGTCTAAGCTAT
CTAGATGGCAGCCTTCCTGGTGACTTGGGTTTGATCCCTTGGGTTTGATGGACCCAGAGG
GGCCTGGAGGCTTCATTGAACCTGATTGGTTGAGGTATGGAGAAATCATCAATGGAAGAT
ATGCAATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGATCCTTGGCAAGGCTGGTCTCA
TCCCTCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATCCCACCTCTAGGAACCT
ACAACTACTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATGGCCCTCATGGGCTTTG
CTGAGCACCGAAGAGCACAGGATTATTATAAGCCTGGATCGATGGGAAAGCAGTATTTCT
TAGGTTTCGAGAAGGGTCTTG
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 118
Score (bit) 219.0
E-value 2.0e-67
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948317|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_P24, 5'
         (681 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   219   2e-67
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   215   1e-66
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    70   9e-18
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    69   9e-14
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    70   8e-12
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    70   1e-11
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    60   2e-11
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    50   1e-07
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    48   3e-07
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    46   1e-06
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    46   1e-06
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    44   2e-06
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    44   6e-06
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    44   7e-06
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    44   7e-06
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    42   7e-06
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    41   7e-06
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    38   1e-05
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    39   2e-05
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...    40   2e-05
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    44   3e-05
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    40   3e-05
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    39   3e-05
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    42   4e-05
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    40   6e-05
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...    42   6e-05
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    41   6e-05
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    41   7e-05
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    40   7e-05
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    40   7e-05

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  219 bits (557), Expect(2) = 2e-67
 Identities = 102/118 (86%), Positives = 107/118 (90%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ W
Sbjct: 75  GFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAW 134

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           F+TGVIPP GTYNYWAD YTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG EKGL
Sbjct: 135 FQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 192



 Score = 57.8 bits (138), Expect(2) = 2e-67
 Identities = 29/42 (69%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
 Frame = +1

Query: 220 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDLGLIP 339
           F VRA +  PVK   +RQLWFASKQSLSYLDG LPGD G  P
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDP 78


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  215 bits (547), Expect(2) = 1e-66
 Identities = 100/117 (85%), Positives = 105/117 (89%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ W
Sbjct: 77  GFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAW 136

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKG 677
           F+TGVIPP GTYNYWAD YTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG EKG
Sbjct: 137 FQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKG 193



 Score = 58.9 bits (141), Expect(2) = 1e-66
 Identities = 31/41 (75%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
 Frame = +1

Query: 226 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDLGLIP 339
           VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD G  P
Sbjct: 40  VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDP 80


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 70.1 bits (170), Expect(2) = 9e-18
 Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +3

Query: 327 GFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 503
           GFDPLGL  DPE         W    E+++ R+AMLGA G   PE L K G++   +   
Sbjct: 87  GFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS--- 137

Query: 504 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 638
           W+  G         Y+ D  TLFV+E+ L+G+AE RR  D  KPG
Sbjct: 138 WYTAG------EQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 176



 Score = 40.4 bits (93), Expect(2) = 9e-18
 Identities = 25/65 (38%), Positives = 30/65 (46%)
 Frame = +1

Query: 145 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 324
           ++  FLGG+ LR +             V A A  P   DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 325 LGLIP 339
            G  P
Sbjct: 86  FGFDP 90


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 68.6 bits (166), Expect(2) = 9e-14
 Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
 Frame = +3

Query: 327 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 503
           GFDPLGL  DPE    F++       E++NGR+AMLG  G + PE+    G+I       
Sbjct: 75  GFDPLGLAEDPENLRWFVQ------AELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 504 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMG-----KQYFL 662
           W+        G   Y+A   TLFV+E  L  + E RR QD   PGS+      KQY L
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSL 177



 Score = 28.5 bits (62), Expect(2) = 9e-14
 Identities = 19/64 (29%), Positives = 26/64 (40%)
 Frame = +1

Query: 148 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDL 327
           + +FLGG    ++G               +A   V+  +  W     S  YL GSLPGD 
Sbjct: 19  KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 328 GLIP 339
           G  P
Sbjct: 75  GFDP 78


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 70.5 bits (171), Expect = 8e-12
 Identities = 47/118 (39%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
 Frame = +3

Query: 327 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 503
           GFDPLGL  DPE    F++       E++NGR+AMLG  G + PE+  K G+I       
Sbjct: 76  GFDPLGLAEDPENLKWFVQ------AELVNGRWAMLGVAGMLLPEVFTKIGII---NVPE 126

Query: 504 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMG-----KQYFL 662
           W+        G   Y+A   TLFV+E  L  + E RR QD   PGS+      KQY L
Sbjct: 127 WY------DAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL 178


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 49/138 (35%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
 Frame = +3

Query: 264 AVMVCLQAKSKLSRW-----QPSW*-------LGFDPLGLM-DPEGPGGFIEPDWLRYGE 404
           A  VC+ A      W      P W         GFDPLGL  DPE         W +  E
Sbjct: 54  ATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLR------WNQQAE 107

Query: 405 IINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEM 584
           +++ R+AMLGA G   PE+L K G++   +   W+  G         Y+ D  TLF++E+
Sbjct: 108 LVHCRWAMLGAAGIFIPELLTKIGILNTPS---WYTAG------EQEYFTDTTTLFIVEL 158

Query: 585 ALMGFAEHRRAQDYYKPG 638
            L+G+AE RR  D  KPG
Sbjct: 159 VLIGWAEGRRWADIIKPG 176



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 26/65 (40%), Positives = 30/65 (46%)
 Frame = +1

Query: 145 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 324
           ++  FLGGR LR +            TV   AD     DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 325 LGLIP 339
            G  P
Sbjct: 86  FGFDP 90


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 60.1 bits (144), Expect(2) = 2e-11
 Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
 Frame = +3

Query: 327 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 503
           GFDPL L  DPE    F++ D      ++NGR+AMLG  G + PE+L KAGL+    A  
Sbjct: 55  GFDPLALAEDPEDLRWFVQAD------VVNGRWAMLGVAGMLIPEVLTKAGLM---NAPE 105

Query: 504 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 650
           W R   +P  G   Y+A   T   + M+   + E RR QD   PGS+ +
Sbjct: 106 WLR---LP--GKETYFASSSTALRVHMS-STYVEIRRWQDIKNPGSVNQ 148



 Score = 29.3 bits (64), Expect(2) = 2e-11
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +1

Query: 271 WFASKQSLSYLDGSLPGDLGLIP 339
           W    QS +YLDGSL GD G  P
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDP 58


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 50.4 bits (119), Expect(2) = 1e-07
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
 Frame = +3

Query: 327 GFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 503
           GFDPLGL  DP     F++  W R  E+I+GR+AML  +G      +G+A      T + 
Sbjct: 85  GFDPLGLGKDP----AFLK--WYREAELIHGRWAMLAVLGI----FVGQAW-----TGIP 129

Query: 504 WFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQY 656
           WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P S   ++
Sbjct: 130 WFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSVEW 177



 Score = 25.8 bits (55), Expect(2) = 1e-07
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 298 YLDGSLPGDLGLIP 339
           +LDGSLPGD G  P
Sbjct: 75  WLDGSLPGDFGFDP 88


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
 Frame = +3

Query: 327 GFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 503
           GFDPLGL  DP     F++  W R  E+I+GR+AM   +G      +G+A      + + 
Sbjct: 80  GFDPLGLGKDP----AFLK--WYREAELIHGRWAMAAVLGIF----VGQAW-----SGIP 124

Query: 504 WFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEK 674
           WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P S   ++   + K
Sbjct: 125 WFEAGADPGAIAPFSFG----TLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSK 178



 Score = 26.9 bits (58), Expect(2) = 3e-07
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +1

Query: 220 FTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDLGLIP 339
           FTV A A K   +       +     +LDGSLPGD G  P
Sbjct: 44  FTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDP 83


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
 Frame = +3

Query: 402 EIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGV-IPPLGTYNYWADP------ 560
           E+I+ R+AMLGA+G + PEIL K G+   E   VWF+ G  I   G  +Y  +P      
Sbjct: 96  EVIHSRWAMLGALGCVFPEILSKNGVKFGE--AVWFKAGAQIFSEGGLDYLGNPNLVHAQ 153

Query: 561 --YTLFVLEMALMGFAEHRR 614
               ++ +++ LMGF E  R
Sbjct: 154 SILAIWAVQVVLMGFVEGYR 173



 Score = 26.6 bits (57), Expect(2) = 1e-06
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 280 SKQSLSYLDGSLPGDLGLIPWV*WTQRGLEA 372
           S+Q+ SYL G  PGD G      W   GL A
Sbjct: 60  SEQTPSYLTGEFPGDYG------WDTAGLSA 84
tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 118
Score (bit) 222.0
E-value 7.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948317|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0002_P24, 5'
         (681 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   222   7e-69
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   223   1e-67
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   220   4e-67
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   219   5e-67
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   214   3e-66
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   214   4e-66
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   212   1e-64
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   215   2e-64
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   215   2e-64
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   210   3e-64
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   215   1e-63
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   208   3e-62
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   201   6e-62
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   201   6e-62
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   218   2e-61
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   218   2e-61
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   218   2e-61
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   217   4e-61
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   218   4e-55
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   215   2e-54
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   211   3e-53
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   211   3e-53
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   163   3e-46
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   163   3e-46
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   173   8e-46
tr|A6N104|A6N104_ORYSI Chloroplast chlorophyll a-b binding prote...   184   5e-45
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   168   5e-45
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   168   5e-45
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr...   168   1e-44
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   164   3e-44

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  222 bits (565), Expect(2) = 7e-69
 Identities = 104/118 (88%), Positives = 108/118 (91%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGLMDPEGPGGF+EP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ W
Sbjct: 88  GFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPW 147

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           F+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY  PGSMGKQYFLG EK L
Sbjct: 148 FQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPGSMGKQYFLGLEKFL 205



 Score = 63.2 bits (152), Expect(2) = 7e-69
 Identities = 38/67 (56%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
 Frame = +1

Query: 148 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 318
           +Q  LGG+AL              FTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLP
Sbjct: 25  QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 319 GDLGLIP 339
           GD G  P
Sbjct: 85  GDYGFDP 91


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  223 bits (567), Expect(2) = 1e-67
 Identities = 105/118 (88%), Positives = 108/118 (91%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGLMDPEGPGGFIEP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ W
Sbjct: 90  GFDPLGLMDPEGPGGFIEPGWLAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPW 149

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           FRTGVIPP GTY+YWADP+TLFVLEMALMGFAEHRR QDY  PGSM KQYFLGFEK L
Sbjct: 150 FRTGVIPPAGTYDYWADPFTLFVLEMALMGFAEHRRLQDYRYPGSMSKQYFLGFEKYL 207



 Score = 58.5 bits (140), Expect(2) = 1e-67
 Identities = 32/43 (74%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
 Frame = +1

Query: 220 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDLGLIP 339
           F VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD G  P
Sbjct: 51  FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDP 93


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  220 bits (560), Expect(2) = 4e-67
 Identities = 104/118 (88%), Positives = 107/118 (90%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ W
Sbjct: 76  GFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPW 135

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           FRTGVIPP GTY+YWADPYTLFV EMALMGFAEHRR QD+ KPGSMGKQYFLGFEK L
Sbjct: 136 FRTGVIPPAGTYSYWADPYTLFVFEMALMGFAEHRRLQDWAKPGSMGKQYFLGFEKYL 193



 Score = 59.3 bits (142), Expect(2) = 4e-67
 Identities = 30/41 (73%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = +1

Query: 220 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDLGLIP 339
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGD G  P
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDP 79


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  219 bits (559), Expect(2) = 5e-67
 Identities = 104/118 (88%), Positives = 107/118 (90%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ W
Sbjct: 76  GFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPW 135

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           FRTGVIPP GTY+YWADPYTLFV EMALMGFAEHRR QD+ KPGSMGKQYFLGFEK L
Sbjct: 136 FRTGVIPPAGTYSYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYL 193



 Score = 59.3 bits (142), Expect(2) = 5e-67
 Identities = 30/41 (73%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = +1

Query: 220 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDLGLIP 339
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGD G  P
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDP 79


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  214 bits (546), Expect(2) = 3e-66
 Identities = 101/118 (85%), Positives = 105/118 (88%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+ W
Sbjct: 77  GFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETALPW 136

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           F+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLGFEK L
Sbjct: 137 FQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194



 Score = 62.0 bits (149), Expect(2) = 3e-66
 Identities = 35/66 (53%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
 Frame = +1

Query: 151 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 321
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 322 DLGLIP 339
           D G  P
Sbjct: 75  DFGFDP 80


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  214 bits (546), Expect(2) = 4e-66
 Identities = 101/118 (85%), Positives = 105/118 (88%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+ W
Sbjct: 77  GFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETALPW 136

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           F+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLGFEK L
Sbjct: 137 FQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194



 Score = 61.2 bits (147), Expect(2) = 4e-66
 Identities = 35/66 (53%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
 Frame = +1

Query: 151 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 321
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 322 DLGLIP 339
           D G  P
Sbjct: 75  DFGFDP 80


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  212 bits (539), Expect(2) = 1e-64
 Identities = 99/118 (83%), Positives = 103/118 (87%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ W
Sbjct: 75  GFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALPW 134

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           F+TGV PP GTYNYWADPYTLFV EMALMGFAEHRR QD+  PGSMGKQYFLG EK L
Sbjct: 135 FKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYL 192



 Score = 59.3 bits (142), Expect(2) = 1e-64
 Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +1

Query: 151 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 324
           +Q LG R L++            F VRA +  PVK   DR LWFASKQSL+YLDGSLPGD
Sbjct: 19  RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 325 LGLIP 339
            G  P
Sbjct: 74  YGFDP 78


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  215 bits (548), Expect(2) = 2e-64
 Identities = 101/118 (85%), Positives = 105/118 (88%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ W
Sbjct: 75  GFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPW 134

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           F+TGVIPP GTY YWAD YTLFVLEMALMGFAEHRR QD+Y PGSMGKQYFLG EKGL
Sbjct: 135 FQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGL 192



 Score = 55.1 bits (131), Expect(2) = 2e-64
 Identities = 28/42 (66%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
 Frame = +1

Query: 220 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDLGLIP 339
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD G  P
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDP 78


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  215 bits (548), Expect(2) = 2e-64
 Identities = 101/118 (85%), Positives = 105/118 (88%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ W
Sbjct: 75  GFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPW 134

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           F+TGVIPP GTY YWAD YTLFVLEMALMGFAEHRR QD+Y PGSMGKQYFLG EKGL
Sbjct: 135 FQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGL 192



 Score = 55.1 bits (131), Expect(2) = 2e-64
 Identities = 28/42 (66%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
 Frame = +1

Query: 220 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDLGLIP 339
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD G  P
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDP 78


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
           mays PE=2 SV=1
          Length = 267

 Score =  210 bits (535), Expect(2) = 3e-64
 Identities = 97/118 (82%), Positives = 102/118 (86%)
 Frame = +3

Query: 327 GFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVW 506
           GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ W
Sbjct: 69  GFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPW 128

Query: 507 FRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 680
           F+TGVIPP GTYNYWAD YTLFV  MALMGFAEHRR QD+Y PGSMGKQYFLG EK L
Sbjct: 129 FKTGVIPPAGTYNYWADSYTLFVFNMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKFL 186



 Score = 59.3 bits (142), Expect(2) = 3e-64
 Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
 Frame = +1

Query: 220 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDLGLIP 339
           F VRA++  P K   DRQLWFASKQSLSYLDG+LPGD G  P
Sbjct: 31  FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDP 72