DK948327 |
Clone id |
TST38A01NGRL0003_A10 |
Library |
TST38 |
Length |
681 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_A10. 5' end sequence. |
Accession |
DK948327 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1797Contig1 |
Sequence |
CGGAGGTTTAAACATTCTCCCGCAGAAACGATGGAATGTCTACAATTTCGATAATAGGGA GAAGGTTCGCAAGGATGAGGAGGCAGCAGCCAGGGAGGAGAGTATACGGCAACAGCAGCA GAGAGAGAAGGATTCAGAAGACCGCCTTGCCAAGCTTCGTGATGCGGCGCTTGCCAAACA CAGAGACGGGGCTCAAAACGCAGAGGAGGCCCTTAACAACGATGGTGAATCCACTCACGA AAGTCAAGTAGATGAGATCCAAAAAGTGAAACTTTTTGATGGGCTCATCTCATTCAAGAG ACTCGCTCCTGGTTCTGTTGCAAGTGAGACGTACAAGGGTCCCCAGGAAGTGGACAAGAA GATTTTTCGTGGCGATAAGGAGCTTGAACGTCTCTACAAGAGGGCTACAAAAGAGGCAAC CCGTGTTGGTAAGGATGGAGTTGAAGCGGATGACGAGCACTACAGACTTGGGTATGGTTG CTTAGACAGAACTAGAAAAAGGCCCTGGTATCTTCTCAAAAGCTTGATGCAGGAGGAGAC TGGAGCAGTCACTGGAACAAATGTAGATCATTCAGTGAAACCACAAAAGAAGCAAAAGAA GACAATCGAGGAATTGCGACAAGAAAGACTGAAGAGGGAACAGCAGGAGCGGGAGAGAGC TCAAAAAATAGTTTCGGCTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96BZ8 |
Definition |
sp|Q96BZ8|LENG1_HUMAN Leukocyte receptor cluster member 1 OS=Homo sapiens |
Align length |
170 |
Score (bit) |
33.1 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TCK4 |
Definition |
tr|A9TCK4|A9TCK4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
214 |
Score (bit) |
75.5 |
E-value |
3.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948327|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0003_A10, 5' (681 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TCK4|A9TCK4_PHYPA Predicted protein OS=Physcomitrella paten... 75 3e-12 tr|O23497|O23497_ARATH Putative uncharacterized protein dl4290w ... 75 4e-12 tr|A2Z965|A2Z965_ORYSI Putative uncharacterized protein OS=Oryza... 70 2e-10 tr|A7PR63|A7PR63_VITVI Chromosome chr14 scaffold_26, whole genom... 67 1e-09 tr|Q8LN93|Q8LN93_ORYSJ Os10g0507500 protein OS=Oryza sativa subs... 66 2e-09 tr|A3C6B7|A3C6B7_ORYSJ Putative uncharacterized protein OS=Oryza... 65 4e-09 tr|B4FRI5|B4FRI5_MAIZE Putative uncharacterized protein OS=Zea m... 63 2e-08 tr|A8INU5|A8INU5_CHLRE Predicted protein OS=Chlamydomonas reinha... 48 7e-04 tr|A0CT76|A0CT76_PARTE Chromosome undetermined scaffold_27, whol... 45 0.004 tr|B6KTM4|B6KTM4_TOXGO Putative uncharacterized protein OS=Toxop... 43 0.016 tr|A9V3N6|A9V3N6_MONBE Predicted protein OS=Monosiga brevicollis... 40 0.14 tr|Q4UAB1|Q4UAB1_THEAN Putative uncharacterized protein OS=Theil... 40 0.18 tr|Q4N120|Q4N120_THEPA Putative uncharacterized protein OS=Theil... 40 0.18 tr|B3L452|B3L452_PLAKH Putative uncharacterized protein OS=Plasm... 40 0.18 tr|A7AWT4|A7AWT4_BABBO Putative uncharacterized protein OS=Babes... 40 0.18 tr|Q9Y011|Q9Y011_PLAF7 Putative uncharacterized protein MAL3P5.7... 39 0.23 tr|Q7RM97|Q7RM97_PLAYO Putative uncharacterized protein PY02286 ... 39 0.31 tr|Q4XP89|Q4XP89_PLACH Putative uncharacterized protein (Fragmen... 39 0.31 tr|Q54MR2|Q54MR2_DICDI Putative uncharacterized protein OS=Dicty... 39 0.40 tr|A5KBF6|A5KBF6_PLAVI Putative uncharacterized protein OS=Plasm... 39 0.40 tr|A7F2S6|A7F2S6_SCLS1 Putative uncharacterized protein OS=Scler... 36 2.6 tr|A6RMZ5|A6RMZ5_BOTFB Putative uncharacterized protein OS=Botry... 36 2.6 tr|B7PKY0|B7PKY0_IXOSC Putative uncharacterized protein OS=Ixode... 35 5.8 tr|A7RRI5|A7RRI5_NEMVE Predicted protein OS=Nematostella vectens... 35 5.8 tr|A6RDG2|A6RDG2_AJECN Putative uncharacterized protein OS=Ajell... 35 5.8 tr|B0WAC5|B0WAC5_CULQU Leukocyte receptor cluster member 1 OS=Cu... 34 9.8 tr|Q4PFA4|Q4PFA4_USTMA Putative uncharacterized protein OS=Ustil... 34 9.8 tr|B6NWW7|B6NWW7_BRAFL Putative uncharacterized protein OS=Branc... 34 9.9
>tr|A9TCK4|A9TCK4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169315 PE=4 SV=1 Length = 290
Score = 75.5 bits (184), Expect = 3e-12 Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 14/214 (6%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKDXXXXXXXXXXXXXXXXXKDSEXXXXXXXXXXXXXH 181 GGLNILPQKRWNVYNFDNREKV++D +++E Sbjct: 5 GGLNILPQKRWNVYNFDNREKVKRDEEKAAREEAIERQQARQREAELRLEKLREVAQAKR 64
Query: 182 R--------DGAQNAEEALNNDGESTHESQVDEIQKVKLFDGLISFKRLAPGSVASETYK 337 DG AE+ L + + + + E + K F+ F+ + K Sbjct: 65 NGSCEFRVADGEGTAEQPLLGNEQENEVAALAEAEGAKHFN---LFEIAGQPEQGTAKAK 121
Query: 338 GPQEV--DKKI-FRG--DKELERLYKRATKEATRVGKDGVEADDEHYRLGYGCLDRTRKR 502 G + D K+ RG DK+ R K+ K R +DE Y G G + ++ K+ Sbjct: 122 GNNDWINDLKVGTRGGLDKQDIRELKKMEKSKDRA------PEDEGYEFGCGLVGKSGKK 175
Query: 503 PWYLLKSLMQEETG-AVTGTNVDHSVKPQKKQKK 601 PWY K M E T G+ + S P+++ K Sbjct: 176 PWYATKRFMVERTSDGGVGSRISRSRSPEERPSK 209
>tr|O23497|O23497_ARATH Putative uncharacterized protein dl4290w (Putative uncharacterized protein AT4g16530) OS=Arabidopsis thaliana GN=dl4290w PE=4 SV=1 Length = 773
Score = 75.1 bits (183), Expect = 4e-12 Identities = 65/204 (31%), Positives = 85/204 (41%), Gaps = 4/204 (1%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKDXXXXXXXXXXXXXXXXXKDSEXXXXXXXXXXXXXH 181 GGLNILPQKRWNVYNFDNREKVRK + Sbjct: 556 GGLNILPQKRWNVYNFDNREKVRK------------------AEEAAAREEQIKREEARK 597
Query: 182 RDGAQNAEEALNNDGESTHESQVDEIQKVK----LFDGLISFKRLAPGSVASETYKGPQE 349 RD E N G + + E +K K + ++ + SV SE K +E Sbjct: 598 RDAESRLEVLRNVRGLAPLKRASPEAEKGKDEAVVAAAVVKSTAVVVESVESEEPKTEKE 657
Query: 350 VDKKIFRGDKELERLYKRATKEATRVGKDGVEADDEHYRLGYGCLDRTRKRPWYLLKSLM 529 D++ + E A A R G + D+E YRLGYG + KRPWYL K Sbjct: 658 EDEERSGCNGE-----SSAKDAAARAG----DPDEEKYRLGYGVAGKGVKRPWYLEK--R 706
Query: 530 QEETGAVTGTNVDHSVKPQKKQKK 601 +E +V G + D + +KK Sbjct: 707 NDENDSVRGEDDDGGCGGYEAKKK 730
>tr|A2Z965|A2Z965_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34257 PE=4 SV=1 Length = 246
Score = 69.7 bits (169), Expect = 2e-10 Identities = 57/205 (27%), Positives = 78/205 (38%), Gaps = 3/205 (1%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKDXXXXXXXXXXXXXXXXXKDSEXXXXXXXXXXXXXH 181 GGLNILPQKRWNVYNFDNREKVR+D ++S Sbjct: 5 GGLNILPQKRWNVYNFDNREKVRRDEAEAAREEQLQREADRRRESGLRLAALRRNRGLQS 64
Query: 182 RDGAQNAEEALNNDGESTHESQVDEIQ---KVKLFDGLISFKRLAPGSVASETYKGPQEV 352 D A + + + S + + LF G+ A A + G + Sbjct: 65 ADAAPLSPRPPTDAADPADPSPAADDSDGGHINLFSGVPGVSGGAADFAALASADGGRGA 124
Query: 353 DKKIFRGDKELERLYKRATKEATRVGKDGVEADDEHYRLGYGCLDRTRKRPWYLLKSLMQ 532 ++ + KR +E VG D+E YRLGYG + PWY+ K L Sbjct: 125 AREREPPANPNPKKRKRKEEEVRAVG-----PDEEKYRLGYGLAGKGVAAPWYMSKPLAS 179
Query: 533 EETGAVTGTNVDHSVKPQKKQKKTI 607 + SV + KK+I Sbjct: 180 SSKATKDREVGEGSVGKKNGGKKSI 204
>tr|A7PR63|A7PR63_VITVI Chromosome chr14 scaffold_26, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022345001 PE=4 SV=1 Length = 209
Score = 67.0 bits (162), Expect = 1e-09 Identities = 58/201 (28%), Positives = 82/201 (40%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKDXXXXXXXXXXXXXXXXXKDSEXXXXXXXXXXXXXH 181 GGLNILPQK WNVY+++NRE+VR+D +D+E Sbjct: 5 GGLNILPQKSWNVYSYENRERVRRDEEAAARNEQMKREQSRKRDTEFRLERLRLSRGLA- 63
Query: 182 RDGAQNAEEALNNDGESTHESQVDEIQKVKLFDGLISFKRLAPGSVASETYKGPQEVDKK 361 A E+ +D +S+H + LF+GL F + V + Sbjct: 64 --SPSQAVESSASDSKSSH---------INLFEGLRVFDSVEGEGVGQKR---------- 102
Query: 362 IFRGDKELERLYKRATKEATRVGKDGVEADDEHYRLGYGCLDRTRKRPWYLLKSLMQEET 541 K+A KE G V +++ YRLGYG R K PWYL S + + Sbjct: 103 ------------KKAKKE--EAGAKVVFPENDKYRLGYGVGGRGMKLPWYL--SRLGNDL 146
Query: 542 GAVTGTNVDHSVKPQKKQKKT 604 A G D + + KKQ K+ Sbjct: 147 FAENGN--DGTARSGKKQSKS 165
>tr|Q8LN93|Q8LN93_ORYSJ Os10g0507500 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0015K05.14 PE=4 SV=1 Length = 248
Score = 66.2 bits (160), Expect = 2e-09 Identities = 57/190 (30%), Positives = 74/190 (38%), Gaps = 17/190 (8%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKDXXXXXXXXXXXXXXXXXKDSEXXXXXXXXXXXXXH 181 GGLNILPQKRWNVYNFDNREKVR+D +DS+ Sbjct: 5 GGLNILPQKRWNVYNFDNREKVRRDEAEAAREEQLQREAVRRRDSDLRLAALRRNRGLQS 64
Query: 182 RDGA--------QNAEEALNNDGESTHESQVDEIQKVKLFD------GLISFKRLAP--- 310 D A AE+ + + + + + + LF G F LA Sbjct: 65 ADAAPLPPRPPTYAAEQCPADPADPSPAADDSDGGHINLFSARGGGGGATDFAVLASADG 124
Query: 311 GSVASETYKGPQEVDKKIFRGDKELERLYKRATKEATRVGKDGVEADDEHYRLGYGCLDR 490 G A+ + P + K KR +E VG D+E YRLGYG + Sbjct: 125 GRGAAREREPPANPNPK----------KRKRKEEEVRAVG-----PDEEKYRLGYGLAGK 169
Query: 491 TRKRPWYLLK 520 PWY+ K Sbjct: 170 GVAAPWYMSK 179
>tr|A3C6B7|A3C6B7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030839 PE=4 SV=1 Length = 248
Score = 65.1 bits (157), Expect = 4e-09 Identities = 56/190 (29%), Positives = 74/190 (38%), Gaps = 17/190 (8%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKDXXXXXXXXXXXXXXXXXKDSEXXXXXXXXXXXXXH 181 GGLNILPQKRWNVYNFDNREKVR+D +DS+ Sbjct: 5 GGLNILPQKRWNVYNFDNREKVRRDEAEAAREEQLQREAVRRRDSDLRLAALRRNRGLQS 64
Query: 182 RDGA--------QNAEEALNNDGESTHESQVDEIQKVKLFD------GLISFKRLAP--- 310 D + AE+ + + + + + + LF G F LA Sbjct: 65 ADASPLPPRPPTYAAEQCPADPADPSPAADDSDGGHINLFSARGGGGGATDFAVLASADG 124
Query: 311 GSVASETYKGPQEVDKKIFRGDKELERLYKRATKEATRVGKDGVEADDEHYRLGYGCLDR 490 G A+ + P + K KR +E VG D+E YRLGYG + Sbjct: 125 GRGAAREREPPANPNPK----------KRKRKEEEVRAVG-----PDEEKYRLGYGLAGK 169
Query: 491 TRKRPWYLLK 520 PWY+ K Sbjct: 170 GVAAPWYMSK 179
>tr|B4FRI5|B4FRI5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 249
Score = 62.8 bits (151), Expect = 2e-08 Identities = 53/185 (28%), Positives = 72/185 (38%), Gaps = 14/185 (7%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKDXXXXXXXXXXXXXXXXXKDSE----------XXXX 151 GGLNILPQKRWNVYNFDNREKV+KD ++S+ Sbjct: 5 GGLNILPQKRWNVYNFDNREKVQKDEAAAAREEQLQREAERRRESDLRLAALRRNRGLVQ 64
Query: 152 XXXXXXXXXHRDGAQNAEEALNNDGESTHESQVDEIQKVKLFDG----LISFKRLAPGSV 319 H G + +AL + ++ D + LF G F LA S Sbjct: 65 AETPPAPPSHPAGPADPADALPSPADALPSPATDG-DHINLFSGGSGVATDFDALASASG 123
Query: 320 ASETYKGPQEVDKKIFRGDKELERLYKRATKEATRVGKDGVEADDEHYRLGYGCLDRTRK 499 + + D + ++ +E RV V D+E YRLGYG + Sbjct: 124 GRGAAREREP--------DADPNPKKRKKKEEEVRV----VGPDEEKYRLGYGLAGKGVA 171
Query: 500 RPWYL 514 PWY+ Sbjct: 172 VPWYM 176
>tr|A8INU5|A8INU5_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_188919 PE=4 SV=1 Length = 229
Score = 47.8 bits (112), Expect = 7e-04 Identities = 21/25 (84%), Positives = 22/25 (88%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKD 76 GGLNILPQKRWNVYN DNR KV +D Sbjct: 5 GGLNILPQKRWNVYNRDNRLKVAQD 29
>tr|A0CT76|A0CT76_PARTE Chromosome undetermined scaffold_27, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00010227001 PE=4 SV=1 Length = 297
Score = 45.1 bits (105), Expect = 0.004 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKD 76 GGLNILPQK+WNVYN +NR V +D Sbjct: 5 GGLNILPQKKWNVYNMENRNIVERD 29
>tr|B6KTM4|B6KTM4_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49 GN=TGME49_097770 PE=4 SV=1 Length = 590
Score = 43.1 bits (100), Expect = 0.016 Identities = 17/25 (68%), Positives = 22/25 (88%) Frame = +2
Query: 2 GGLNILPQKRWNVYNFDNREKVRKD 76 GGLNILPQKRW++Y DNR +V++D Sbjct: 5 GGLNILPQKRWHLYRHDNRLRVQRD 29
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