DK948370 |
Clone id |
TST38A01NGRL0003_C06 |
Library |
TST38 |
Length |
678 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_C06. 5' end sequence. |
Accession |
DK948370 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL589Contig1 |
Sequence |
GTGGCAAAGTATGTTTTGAGAGAGTCGAGTGCGTGCGTGCGCGCGCGCTCTTCTGCTCCT CGCTGAGAGTCGCACCGTCGCACTACGAATGGCTCTACTTTCAGCATCGTCTCTCTCACC AGCAGCTTCCATTTCTGCGTCCTTACTTTCCTCGGCGCCGCCCTCTTTCCCCTATTTCTC TTCTGCGCAGTCAGCCTTTCTCTTCAGTTCTCTCAAATATGTACACTTAAAATCAAGTCA TGGCTGCCATTTCAAGAAGATTACACAATGTGCTCTGTCCGTGAGATCGGAGGTGAAGTA TGTTGATGGAGTTGAAGCCAAGAAGCTTGTCACAGAAGAAGGTTACTCTGTCTTAGATAT CAGAGACCGCATTCAATATGACAAAGCCCACATTGTCCCCAGCACACACATTCCTGTCTA CATCGAAAATATGGACAATGACATTAATACCATCATATACAGGACTCTGCACAACAACTT TTCTGGCTTGTTCTATGGCTTGGCTTTCACAAAACCCAATCCAGATTTCTTGTCCTCAGT AGAGAAGAAGTTTTCAAAGGACAGCAAGTTATTACTTGTTTGCCAGGAGGGTCTAAGGTC TGGGGCAGCAGCAGACCAACTTGAGAGGGCAGGCTTTCAAAATTTAGCCTACATAAGCTC GGGTTTGCAGAAAGTTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P54433 |
Definition |
sp|P54433|YRKF_BACSU UPF0033 protein yrkF OS=Bacillus subtilis |
Align length |
118 |
Score (bit) |
40.0 |
E-value |
0.011 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6SNU6 |
Definition |
tr|B6SNU6|B6SNU6_MAIZE Rhodanese family protein OS=Zea mays |
Align length |
136 |
Score (bit) |
187.0 |
E-value |
4.0e-46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948370|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0003_C06, 5' (678 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6SNU6|B6SNU6_MAIZE Rhodanese family protein OS=Zea mays PE=2... 187 4e-46 tr|A7PVU0|A7PVU0_VITVI Chromosome chr8 scaffold_34, whole genome... 181 4e-44 tr|Q94AY4|Q94AY4_ARATH At2g42220/T24P15.13 (Fragment) OS=Arabido... 181 5e-44 tr|O48529|O48529_ARATH Rhodanese-like family protein OS=Arabidop... 181 5e-44 tr|A2YZA3|A2YZA3_ORYSI Putative uncharacterized protein OS=Oryza... 177 5e-43 tr|A9NS64|A9NS64_PICSI Putative uncharacterized protein OS=Picea... 177 7e-43 tr|Q6H444|Q6H444_ORYSJ Os09g0279400 protein OS=Oryza sativa subs... 175 2e-42 tr|A3BWU3|A3BWU3_ORYSJ Putative uncharacterized protein OS=Oryza... 175 2e-42 tr|A2Q4U4|A2Q4U4_MEDTR Rhodanese-like OS=Medicago truncatula GN=... 171 4e-41 tr|A9SZ80|A9SZ80_PHYPA Predicted protein (Fragment) OS=Physcomit... 170 9e-41 tr|B7FN62|B7FN62_MEDTR Putative uncharacterized protein OS=Medic... 169 1e-40 tr|Q8LBR6|Q8LBR6_ARATH Rhodanese-like family protein OS=Arabidop... 96 2e-18 tr|Q9SR92|Q9SR92_ARATH T16O11.14 protein (Putative rhodanese fam... 94 8e-18 tr|Q8RY72|Q8RY72_ARATH Putative rhodanese family protein (Fragme... 94 8e-18 tr|A7QHR3|A7QHR3_VITVI Chromosome chr8 scaffold_99, whole genome... 93 2e-17 tr|A5B641|A5B641_VITVI Putative uncharacterized protein OS=Vitis... 92 2e-17 tr|A9TJL4|A9TJL4_PHYPA Predicted protein OS=Physcomitrella paten... 89 3e-16 tr|A7KNZ8|A7KNZ8_GOSBA Rhodanese-like family protein-like protei... 87 7e-16 tr|Q10MY4|Q10MY4_ORYSJ Os03g0289400 protein OS=Oryza sativa subs... 78 6e-13 tr|Q501G8|Q501G8_ARATH At4g24750 OS=Arabidopsis thaliana PE=2 SV=1 76 2e-12 tr|Q0WWT7|Q0WWT7_ARATH Putative uncharacterized protein At4g2475... 76 2e-12 tr|Q6ZI49|Q6ZI49_ORYSJ Os02g0596000 protein OS=Oryza sativa subs... 75 5e-12 tr|B8AER2|B8AER2_ORYSI Putative uncharacterized protein OS=Oryza... 75 5e-12 tr|A2XFF7|A2XFF7_ORYSI Putative uncharacterized protein OS=Oryza... 75 5e-12 tr|A7PCP1|A7PCP1_VITVI Chromosome chr17 scaffold_12, whole genom... 74 6e-12 tr|A9RKM5|A9RKM5_PHYPA Predicted protein OS=Physcomitrella paten... 73 1e-11 tr|A9T240|A9T240_PHYPA Predicted protein (Fragment) OS=Physcomit... 73 2e-11 tr|B4G1T0|B4G1T0_MAIZE Putative uncharacterized protein OS=Zea m... 70 2e-10 tr|A3A8M6|A3A8M6_ORYSJ Putative uncharacterized protein OS=Oryza... 66 2e-09 tr|A9GRF0|A9GRF0_SORC5 Rhodanese-like domain-containing protein ... 60 2e-07
>tr|B6SNU6|B6SNU6_MAIZE Rhodanese family protein OS=Zea mays PE=2 SV=1 Length = 239
Score = 187 bits (476), Expect = 4e-46 Identities = 92/136 (67%), Positives = 111/136 (81%) Frame = +2
Query: 269 CALSVRSEVKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVPSTHIPVYIENMDNDIN 448 CA VR+EV +VD EAK+LV EEGY+VLDIRDR Q ++AHI STH+P++IEN DNDI Sbjct: 43 CAAVVRAEVSFVDADEAKRLVGEEGYTVLDIRDRAQRERAHIKSSTHVPLFIENQDNDIG 102
Query: 449 TIIYRTLHNNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLVCQEGLRSGAAADQLER 628 TI+ R LHNNF+GLF+GL FTK NPDF +V+ KFS +SKLL+VCQEGLRS AAAD LE+ Sbjct: 103 TIVKRQLHNNFAGLFFGLPFTKLNPDFALTVKDKFSPESKLLVVCQEGLRSAAAADALEK 162
Query: 629 AGFQNLAYISSGLQKV 676 GFQN+A I+SGLQ V Sbjct: 163 EGFQNIACITSGLQTV 178
>tr|A7PVU0|A7PVU0_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025354001 PE=4 SV=1 Length = 213
Score = 181 bits (459), Expect = 4e-44 Identities = 88/152 (57%), Positives = 117/152 (76%), Gaps = 2/152 (1%) Frame = +2
Query: 227 LKSSHGCHF--KKITQCALSVRSEVKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVP 400 L++ HG K + + L +++EV +V+ E KKL+ EGY++LD+RD+ QYD+AHI Sbjct: 2 LETRHGRTMVGKSLGRRNLQIKAEVNFVNAEEGKKLIAVEGYAILDVRDKSQYDRAHIKS 61
Query: 401 STHIPVYIENMDNDINTIIYRTLHNNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLV 580 H+P++IEN DND+ TII RT+HNNFSGLF+GL FTK NPDF+ SV+ +FS +SKLLLV Sbjct: 62 CYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKVNPDFVQSVKSQFSPESKLLLV 121
Query: 581 CQEGLRSGAAADQLERAGFQNLAYISSGLQKV 676 CQEGLRS AAA +LE+AGF N+A I+SGLQ V Sbjct: 122 CQEGLRSAAAASKLEQAGFANIACITSGLQTV 153
>tr|Q94AY4|Q94AY4_ARATH At2g42220/T24P15.13 (Fragment) OS=Arabidopsis thaliana PE=2 SV=1 Length = 227
Score = 181 bits (458), Expect = 5e-44 Identities = 85/139 (61%), Positives = 114/139 (82%) Frame = +2
Query: 260 ITQCALSVRSEVKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVPSTHIPVYIENMDN 439 I + +L + +E+K+V+ EAK+L+ EEGYSV+D+RD+ Q+++AHI +HIP++I N DN Sbjct: 31 IRRRSLRIAAELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCSHIPLFIYNEDN 90
Query: 440 DINTIIYRTLHNNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLVCQEGLRSGAAADQ 619 DI TII RT+HNNFSGLF+GL FTK NP+FL SV +FS+DSKLLLVCQEGLRS AAA + Sbjct: 91 DIGTIIKRTVHNNFSGLFFGLPFTKVNPEFLKSVRNEFSQDSKLLLVCQEGLRSAAAASR 150
Query: 620 LERAGFQNLAYISSGLQKV 676 LE AG++N+A ++SGLQ V Sbjct: 151 LEEAGYENIACVTSGLQSV 169
>tr|O48529|O48529_ARATH Rhodanese-like family protein OS=Arabidopsis thaliana GN=At2g42220 PE=2 SV=1 Length = 234
Score = 181 bits (458), Expect = 5e-44 Identities = 85/139 (61%), Positives = 114/139 (82%) Frame = +2
Query: 260 ITQCALSVRSEVKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVPSTHIPVYIENMDN 439 I + +L + +E+K+V+ EAK+L+ EEGYSV+D+RD+ Q+++AHI +HIP++I N DN Sbjct: 38 IRRRSLRIAAELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCSHIPLFIYNEDN 97
Query: 440 DINTIIYRTLHNNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLVCQEGLRSGAAADQ 619 DI TII RT+HNNFSGLF+GL FTK NP+FL SV +FS+DSKLLLVCQEGLRS AAA + Sbjct: 98 DIGTIIKRTVHNNFSGLFFGLPFTKVNPEFLKSVRNEFSQDSKLLLVCQEGLRSAAAASR 157
Query: 620 LERAGFQNLAYISSGLQKV 676 LE AG++N+A ++SGLQ V Sbjct: 158 LEEAGYENIACVTSGLQSV 176
>tr|A2YZA3|A2YZA3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30678 PE=4 SV=1 Length = 239
Score = 177 bits (449), Expect = 5e-43 Identities = 88/133 (66%), Positives = 106/133 (79%) Frame = +2
Query: 272 ALSVRSEVKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVPSTHIPVYIENMDNDINT 451 A+ VR+EV +VDG EAK+LV EEGY+VLDIRDR Q ++AHI S H+P+++EN D DI T Sbjct: 44 AIGVRAEVSFVDGDEAKRLVAEEGYTVLDIRDRTQRERAHIKNSAHVPLFVENDDGDIGT 103
Query: 452 IIYRTLHNNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLVCQEGLRSGAAADQLERA 631 II RT+HNNF+GLF+GL FTK N +F V+ KFS +SKLL+VCQEGLRS AAD LER Sbjct: 104 IIKRTVHNNFAGLFFGLPFTKRNLEFTKMVKDKFSPESKLLVVCQEGLRSTGAADVLERE 163
Query: 632 GFQNLAYISSGLQ 670 GFQNLA I SGLQ Sbjct: 164 GFQNLACIKSGLQ 176
>tr|A9NS64|A9NS64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 237
Score = 177 bits (448), Expect = 7e-43 Identities = 85/145 (58%), Positives = 112/145 (77%) Frame = +2
Query: 242 GCHFKKITQCALSVRSEVKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVPSTHIPVY 421 GC+ + + +++R+EVKYV EAK+LVT+EGY++LD+RD+ QYD+AHI H+P++ Sbjct: 29 GCNLACLNR-TMAIRAEVKYVSPKEAKRLVTDEGYTILDVRDQTQYDRAHIKSCHHVPIF 87
Query: 422 IENMDNDINTIIYRTLHNNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLVCQEGLRS 601 IEN D D T+I RTLHNN SGLF+GL FTK N DF+ V+++F DSKLLLVCQEGLRS Sbjct: 88 IENNDGDFGTVIKRTLHNNVSGLFFGLPFTKSNSDFVPVVQQQFPTDSKLLLVCQEGLRS 147
Query: 602 GAAADQLERAGFQNLAYISSGLQKV 676 AA +LE AG+QNL+ I+SGLQ V Sbjct: 148 SLAARRLEEAGYQNLSSITSGLQSV 172
>tr|Q6H444|Q6H444_ORYSJ Os09g0279400 protein OS=Oryza sativa subsp. japonica GN=P0651G05.2 PE=2 SV=1 Length = 239
Score = 175 bits (444), Expect = 2e-42 Identities = 87/133 (65%), Positives = 106/133 (79%) Frame = +2
Query: 272 ALSVRSEVKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVPSTHIPVYIENMDNDINT 451 A+ VR+EV +VDG EAK+LV EEGY+VLDIRDR Q ++AHI S H+P+++EN D DI T Sbjct: 44 AIGVRAEVSFVDGDEAKRLVAEEGYTVLDIRDRTQRERAHIKNSAHVPLFVENDDGDIGT 103
Query: 452 IIYRTLHNNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLVCQEGLRSGAAADQLERA 631 II RT+H+NF+GLF+GL FTK N +F V+ KFS +SKLL+VCQEGLRS AAD LER Sbjct: 104 IIKRTVHSNFAGLFFGLPFTKRNLEFTKMVKDKFSPESKLLVVCQEGLRSTGAADVLERE 163
Query: 632 GFQNLAYISSGLQ 670 GFQNLA I SGLQ Sbjct: 164 GFQNLACIKSGLQ 176
>tr|A3BWU3|A3BWU3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027515 PE=4 SV=1 Length = 238
Score = 175 bits (444), Expect = 2e-42 Identities = 87/133 (65%), Positives = 106/133 (79%) Frame = +2
Query: 272 ALSVRSEVKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVPSTHIPVYIENMDNDINT 451 A+ VR+EV +VDG EAK+LV EEGY+VLDIRDR Q ++AHI S H+P+++EN D DI T Sbjct: 44 AIGVRAEVSFVDGDEAKRLVAEEGYTVLDIRDRTQRERAHIKNSAHVPLFVENDDGDIGT 103
Query: 452 IIYRTLHNNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLVCQEGLRSGAAADQLERA 631 II RT+H+NF+GLF+GL FTK N +F V+ KFS +SKLL+VCQEGLRS AAD LER Sbjct: 104 IIKRTVHSNFAGLFFGLPFTKRNLEFTKMVKDKFSPESKLLVVCQEGLRSTGAADVLERE 163
Query: 632 GFQNLAYISSGLQ 670 GFQNLA I SGLQ Sbjct: 164 GFQNLACIKSGLQ 176
>tr|A2Q4U4|A2Q4U4_MEDTR Rhodanese-like OS=Medicago truncatula GN=MtrDRAFT_AC157891g17v2 PE=4 SV=1 Length = 234
Score = 171 bits (433), Expect = 4e-41 Identities = 78/145 (53%), Positives = 114/145 (78%), Gaps = 4/145 (2%) Frame = +2
Query: 254 KKITQCAL----SVRSEVKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVPSTHIPVY 421 K ++QC + ++++E+K+V +AK+LV +GY+VLD+RD+ QY++AHI H+P++ Sbjct: 30 KLVSQCKMRKKFTIKAEIKFVTADDAKELVKVDGYNVLDVRDKSQYERAHIKTCYHVPLF 89
Query: 422 IENMDNDINTIIYRTLHNNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLVCQEGLRS 601 +EN DND T + RT+HNNFSGLF+G+ FT+PNPDF+ SV+ + ++KLL+VCQEGLRS Sbjct: 90 VENTDNDPGTFLLRTVHNNFSGLFFGIPFTRPNPDFVQSVKSQIQPETKLLIVCQEGLRS 149
Query: 602 GAAADQLERAGFQNLAYISSGLQKV 676 AAA++LE AGFQN+A I+SGLQ V Sbjct: 150 AAAANKLEDAGFQNVACITSGLQTV 174
>tr|A9SZ80|A9SZ80_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_137884 PE=4 SV=1 Length = 190
Score = 170 bits (430), Expect = 9e-41 Identities = 79/128 (61%), Positives = 104/128 (81%) Frame = +2
Query: 293 VKYVDGVEAKKLVTEEGYSVLDIRDRIQYDKAHIVPSTHIPVYIENMDNDINTIIYRTLH 472 V+Y+D EAKK+V+EEGY+V+DIRD QYD++HI S H+P++I N D D T+I + H Sbjct: 3 VQYLDQEEAKKMVSEEGYTVVDIRDGSQYDRSHIAKSVHVPLFIANEDMDPGTLIKKFAH 62
Query: 473 NNFSGLFYGLAFTKPNPDFLSSVEKKFSKDSKLLLVCQEGLRSGAAADQLERAGFQNLAY 652 N+F+G FYGLAFTK N DFL + E++F KD K+LLVCQEGLRSGAAA++LE AG+QN+AY Sbjct: 63 NSFAGAFYGLAFTKENDDFLPTFERQFKKDDKILLVCQEGLRSGAAAEKLEEAGYQNVAY 122
Query: 653 ISSGLQKV 676 + +GLQKV Sbjct: 123 LMNGLQKV 130
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