DK948410 |
Clone id |
TST38A01NGRL0003_D22 |
Library |
TST38 |
Length |
612 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_D22. 5' end sequence. |
Accession |
DK948410 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL57Contig1 |
Sequence |
CGCTGCTACAGCCATGGCGTGTTTCGCTGCTGCTTCCGCAGCCATCTCCTCCTCCTCTTT TGCCGATGTCTCGGCTAAATTATGTTTCTCCTCTTCTTCCTCCGTTTCTGGCTCTCGCCT TTGCGCACCTGTCTCTCTAACGGTTCCTTCCTCCCGCGCCCGCTCGTCGTCCGTGTCTGC TGCACTGTATTCTGATTCCTCATATGACCTTTCCTCCTTCAAGTTTGAGCCCATTCGGGA ATCCATTGTTGCCCGTGAGATGACCCGCCGCTACCTGACAGACATGATCACCCATGCTTA CGCTGATGATGTGGTTGTGGGTGCTGGTTCTGCTGGCCTGTCACGTGCGTATGAGCTCAA CAAGAACCCCGACATCAAGGTTGCCATTGTGGAGCAGTCTGTAATCCCAGGTGGTGGAGC TTGGCTCGGTGGGCAGCTCTTCTCTGCCATGATTGTAAGGAAGCCAGCCCACCTCTTCCT TGATGAGATTGGTGTGCCCTACCATGAGAAGGATACCTATCTTGTTATCAAGCATGCTGC GCTCTTCACATCCACCATCATGAGCAAGCTTCTGGCCAGGCCAAATGTGAAGCTCTTTAA TGCTGTTGCTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q38814 |
Definition |
sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana |
Align length |
131 |
Score (bit) |
221.0 |
E-value |
2.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948410|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0003_D22, 5' (612 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 221 2e-57 sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 219 7e-57 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 212 1e-54 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 209 9e-54 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 205 1e-52 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 180 4e-45 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 177 3e-44 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 174 4e-43 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 174 4e-43 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 172 9e-43 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 162 1e-39 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 76 1e-13 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 74 6e-13 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 74 8e-13 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 72 2e-12 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 72 2e-12 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 72 3e-12 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 67 6e-11 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 67 9e-11 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 62 2e-09 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 59 1e-08 sp|O29556|THI4_ARCFU Putative thiazole biosynthetic enzyme OS=Ar... 59 2e-08 sp|Q3IMI0|THI4_NATPD Putative thiazole biosynthetic enzyme OS=Na... 57 1e-07 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 56 1e-07 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 56 2e-07 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 56 2e-07 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 55 3e-07 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 55 3e-07 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 55 4e-07 sp|Q12U93|THI4_METBU Putative thiazole biosynthetic enzyme OS=Me... 55 4e-07
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 221 bits (564), Expect = 2e-57 Identities = 109/131 (83%), Positives = 123/131 (93%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELNKNPDIKVAIVEQ 397 F F+PI+ESIV+REMTRRY+TDMIT+A D VVVGAGSAGLS AYE++KNP+++VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 398 SVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHEKDTYLVIKHAALFTSTIMSKLLA 577 SV PGGGAWLGGQLFSAMIVRKPAHLFLDEIGV Y E+DTY+V+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 578 RPNVKLFNAVA 610 RPNVKLFNAVA Sbjct: 176 RPNVKLFNAVA 186
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 219 bits (559), Expect = 7e-57 Identities = 107/131 (81%), Positives = 123/131 (93%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELNKNPDIKVAIVEQ 397 FKF+PI+ESIV+REMTRRY+TDMIT+A D VVVGAGSAGLS AYEL+KNP+I++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 398 SVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHEKDTYLVIKHAALFTSTIMSKLLA 577 SV PGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ Y E+D Y+VIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 578 RPNVKLFNAVA 610 RPNVKLFNAVA Sbjct: 183 RPNVKLFNAVA 193
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 212 bits (539), Expect = 1e-54 Identities = 103/131 (78%), Positives = 119/131 (90%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELNKNPDIKVAIVEQ 397 F+F PI+ESIV+REMTRRY+TDMITHA D V+VGAGSAGLS AYEL+K+P + VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 398 SVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHEKDTYLVIKHAALFTSTIMSKLLA 577 SV PGGGAWLGGQLFSAM+VR+PAHLFLDE+GV Y E + Y+V+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 578 RPNVKLFNAVA 610 RPNVKLFNAVA Sbjct: 179 RPNVKLFNAVA 189
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 209 bits (532), Expect = 9e-54 Identities = 103/131 (78%), Positives = 118/131 (90%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELNKNPDIKVAIVEQ 397 F+F PI+ESIV+REMTRRY+TDMIT+A D V+VGAGSAGLS AYEL+K+P + +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 398 SVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHEKDTYLVIKHAALFTSTIMSKLLA 577 SV PGGGAWLGGQLFSAM+VRKPAHLFLDE+GV Y E + Y+VIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 578 RPNVKLFNAVA 610 RPNVKLFNAVA Sbjct: 182 RPNVKLFNAVA 192
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 205 bits (522), Expect = 1e-52 Identities = 102/131 (77%), Positives = 117/131 (89%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELNKNPDIKVAIVEQ 397 F F+PI+ESIV+REMTRRY+ DMIT+A D VVVGAGS+GL YEL+KNP ++VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLV-CYELSKNPSVQVAIIEQ 118
Query: 398 SVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHEKDTYLVIKHAALFTSTIMSKLLA 577 SV PGGGAWLGGQLFS M+VRKPAHLFLDE+G+ Y E+D Y+VIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 578 RPNVKLFNAVA 610 RPNVKLFNAVA Sbjct: 179 RPNVKLFNAVA 189
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 180 bits (457), Expect = 4e-45 Identities = 88/132 (66%), Positives = 109/132 (82%), Gaps = 1/132 (0%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELN-KNPDIKVAIVE 394 F F PIRES V+R MTRRY +D+ +A +D V+VGAGSAGL+ AY + + PD+K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 395 QSVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHEKDTYLVIKHAALFTSTIMSKLL 574 SV PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY ++ Y+V+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 575 ARPNVKLFNAVA 610 A PNVKLFNA A Sbjct: 169 ALPNVKLFNATA 180
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 177 bits (450), Expect = 3e-44 Identities = 88/130 (67%), Positives = 105/130 (80%), Gaps = 1/130 (0%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELNKN-PDIKVAIVE 394 FKF PIRES V+R MTRRY D+ +A +D V++GAGS GLS AY L K PD+K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 395 QSVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHEKDTYLVIKHAALFTSTIMSKLL 574 SV PGGGAWLGGQLFSAMI+RKPA FL E+GVPY ++ Y+V+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 575 ARPNVKLFNA 604 PN+KLFNA Sbjct: 164 QMPNIKLFNA 173
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 174 bits (440), Expect = 4e-43 Identities = 87/130 (66%), Positives = 103/130 (79%), Gaps = 1/130 (0%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELNKN-PDIKVAIVE 394 FKF PIRES V+R MTRRY D+ +A +D V+VGAGS GLS Y L K PD+K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 395 QSVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHEKDTYLVIKHAALFTSTIMSKLL 574 SV PGGGAWLGGQLFSAM++RKPA FL E+GVPY ++ Y+V+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 575 ARPNVKLFNA 604 PN KLFNA Sbjct: 168 QLPNCKLFNA 177
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 174 bits (440), Expect = 4e-43 Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 3/134 (2%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELNK-NPDIKVAIVE 394 FKF PIRES V+R MTRRY D+ +A +D V+VGAGS GLS AY L K PD+K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 395 QSVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHE--KDTYLVIKHAALFTSTIMSK 568 SV PGGGAWLGGQLFSAM++R+PA +FL+E+GVPY E Y+V+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 569 LLARPNVKLFNAVA 610 +L+ PNVKLFNA A Sbjct: 168 VLSFPNVKLFNATA 181
>sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1 Length = 326
Score = 172 bits (437), Expect = 9e-43 Identities = 83/130 (63%), Positives = 104/130 (80%), Gaps = 1/130 (0%) Frame = +2
Query: 218 FKFEPIRESIVAREMTRRYLTDMITHAYADDVVVGAGSAGLSRAYELNKN-PDIKVAIVE 394 FKF PIRES V+R MT RY D+ A +D ++VGAGS+GLS AY + KN PD+KV I+E Sbjct: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
Query: 395 QSVIPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYHEKDTYLVIKHAALFTSTIMSKLL 574 SV PGGG+WLGGQLFSAM++RKPAHLFL E+ +PY ++ Y+V+KHAALF ST++SK+L Sbjct: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
Query: 575 ARPNVKLFNA 604 PNVKLFNA Sbjct: 158 QLPNVKLFNA 167
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
131 |
Score (bit) |
228.0 |
E-value |
2.0e-58 |
Report |
|