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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948435
Clone id TST38A01NGRL0003_E23
Library
Length 616
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_E23. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAAAAATGTCTACATGATTAGAATGAT
TGGCCGCACAGACTTGGGCGGCGAATACAAAAACAAGGCTCTTAAAAGAGATGAATTAAA
ATTTGGTGATGTGCCTCATCGTTACAAAAGTGTATGTTCACAAGGTCTCCTTGAGAGAAA
AAAGGGCTACAAACGCATTGTCGTTGTCTCCGAGGATAAATCATTGATTTCTAGACAGAG
GGCTTCTGGACAAGGAAGCCGGAAACCTGCACCTGCCTCTTGGCGTCAAAGCCCAGCACG
CGGATGAAGGCTTCGGGGTACTCCTTGGCGCACTCTGCAATTTCACGCAGCACAGCGGCG
GCATCTTGGCAGCCAAACATGGGCAACTTCCACATCACCCAGTATCGCCCATCGTAGTAG
CCGCTGCCATGGAAGTGCTCTCGGTATACGCTTCCAATTTTGTCGAACTCAATGCAGGGG
GTCCAGCCCTTCCGGACCATGAAGTCCACCTGCTTCGCAATCTGCTCGCTTGTCAAAGGC
GGCAAGTAGGACAGAGTCTCGAACTTCTTGTTGTCAGACCAGTCTTTTAGAACAAAACCA
TTGTGAATTGTGTGTG
■■Homology search results ■■ -
sp_hit_id O48550
Definition sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica
Align length 110
Score (bit) 164.0
E-value 2.0e-40
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948435|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_E23, 5'
         (584 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   164   2e-40
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   163   5e-40
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   162   9e-40
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   160   4e-39
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   160   6e-39
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   160   6e-39
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   159   7e-39
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   159   7e-39
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   159   7e-39
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   159   1e-38
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   159   1e-38
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   159   1e-38
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   159   1e-38
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   159   1e-38
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   159   1e-38
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   159   1e-38
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   158   2e-38
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   158   2e-38
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   157   5e-38
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   157   5e-38
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   156   6e-38
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   156   6e-38
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha...   156   6e-38
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   155   1e-37
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   155   1e-37
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   155   1e-37
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   155   2e-37
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   154   3e-37
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   154   3e-37

>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  164 bits (416), Expect = 2e-40
 Identities = 70/110 (63%), Positives = 87/110 (79%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 358
           KKFETLSYLPPLT EQ+ ++VD+++R GW PCIEF K+G VYRE+ +  GYYDGRYW MW
Sbjct: 66  KKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMW 125

Query: 357 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           KLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 126 KLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  163 bits (413), Expect = 5e-40
 Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 361
           KK+ETLSYLPPL+ E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW M
Sbjct: 67  KKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 126

Query: 360 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           WKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 127 WKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  162 bits (411), Expect = 9e-40
 Identities = 72/111 (64%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 361
           KKFETLSYLPPL+SEQ+AK+VD+++RK   PC+EF+ + G VYREH    GYYDGRYW M
Sbjct: 69  KKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTM 128

Query: 360 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           WKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 129 WKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  160 bits (406), Expect = 3e-39
 Identities = 71/121 (58%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
 Frame = -3

Query: 558 LKDW--SDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKI-GSVYREHFHGSG 388
           +K W   + K++ETLSYLPPLT++Q+A+QVD+++   W PC+EF+   G VYREH +  G
Sbjct: 58  MKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPG 117

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YYDGRYW MWKLPMFGC D A VL E+ EC KEYP AFIR++GFD+ RQVQ   F+  KP
Sbjct: 118 YYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKP 177

Query: 207 S 205
           +
Sbjct: 178 A 178


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  160 bits (405), Expect = 4e-39
 Identities = 68/110 (61%), Positives = 85/110 (77%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 358
           KKFETLSYLPPL++E ++KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MW
Sbjct: 56  KKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 115

Query: 357 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           KLPMFGC DA  VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  160 bits (404), Expect = 6e-39
 Identities = 67/110 (60%), Positives = 84/110 (76%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 358
           KKFETLSYLPPL++E + KQVD+++R  W PC+EF K+G ++REH    GYYDGRYW MW
Sbjct: 56  KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 115

Query: 357 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           KLPMFGC DA  VL E+ E  KEYP+A++R++GFD  RQVQ   F+  KP
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
           PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
          Length = 175

 Score =  160 bits (404), Expect = 6e-39
 Identities = 68/110 (61%), Positives = 84/110 (76%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 358
           KKFETLSYLPPL++E + KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MW
Sbjct: 57  KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 116

Query: 357 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           KLPMFGC DA  VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRP 166


>sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small chain
           A, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RBCS-A PE=2 SV=2
          Length = 175

 Score =  159 bits (403), Expect = 7e-39
 Identities = 67/110 (60%), Positives = 84/110 (76%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 358
           KKFETLSYLPPLT E + KQ+++++R  W PC+EF K+G VYRE+    GYYDGRYW MW
Sbjct: 57  KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMW 116

Query: 357 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           KLPMFGC DA  VL+E+ E  K YP+AF+R++GFD  RQVQ+  F+  KP
Sbjct: 117 KLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166


>sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS
           PE=1 SV=1
          Length = 175

 Score =  159 bits (403), Expect = 7e-39
 Identities = 67/110 (60%), Positives = 84/110 (76%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 358
           KKFETLSYLPPLT E + KQ+++++R  W PC+EF K+G VYRE+    GYYDGRYW MW
Sbjct: 57  KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMW 116

Query: 357 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           KLPMFGC DA  VL+E+ E  K YP+AF+R++GFD  RQVQ+  F+  KP
Sbjct: 117 KLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166


>sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2
           SV=2
          Length = 175

 Score =  159 bits (403), Expect = 7e-39
 Identities = 67/110 (60%), Positives = 84/110 (76%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 358
           KKFETLSYLPPLT E + KQ+++++R  W PC+EF K+G VYRE+    GYYDGRYW MW
Sbjct: 57  KKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMW 116

Query: 357 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           KLPMFGC DA  VL+E+ E  K YP+AF+R++GFD  RQVQ+  F+  KP
Sbjct: 117 KLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 113
Score (bit) 221.0
E-value 2.0e-56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948435|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_E23, 5'
         (584 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   221   2e-56
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   171   4e-41
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   166   1e-39
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   162   2e-38
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   161   2e-38
tr|Q9SBU5|Q9SBU5_9POAL Ribulose bisphosphate carboxylase small c...   161   3e-38
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   161   3e-38
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   161   3e-38
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   161   3e-38
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q9ZRS5|Q9ZRS5_SECCE Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   159   8e-38
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   159   8e-38
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c...   159   8e-38
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   159   8e-38

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  221 bits (564), Expect = 2e-56
 Identities = 100/113 (88%), Positives = 109/113 (96%)
 Frame = -3

Query: 543 DNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWV 364
           DNKKFETLSYLPPLT++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+
Sbjct: 61  DNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWI 120

Query: 363 MWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 205
           MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 121 MWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  171 bits (432), Expect = 4e-41
 Identities = 76/129 (58%), Positives = 97/129 (75%), Gaps = 5/129 (3%)
 Frame = -3

Query: 579 TIHNG---FVLKDWS--DNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSV 415
           T+ NG   F +K W+  +NKKFE LSYLPPL+ + IAK++D+M++KGW PC+EFD++GSV
Sbjct: 40  TVSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSV 99

Query: 414 YREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQ 235
            REH    GYYDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q
Sbjct: 100 RREHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQ 159

Query: 234 VSGFLVQKP 208
              F++QKP
Sbjct: 160 CMAFVIQKP 168


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  167 bits (423), Expect = 4e-40
 Identities = 79/133 (59%), Positives = 100/133 (75%), Gaps = 8/133 (6%)
 Frame = -3

Query: 579 TIHNGF---VLKDWSD--NKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSV 415
           ++HNG     ++ W+     KFET SYLPPLT +QIAKQVDFM+++   PCIEFD +GSV
Sbjct: 47  SVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSV 106

Query: 414 YREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 244
            R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+
Sbjct: 107 SRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKK 166

Query: 243 QVQVSGFLVQKPS 205
           QVQ+ GFLV +P+
Sbjct: 167 QVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  167 bits (423), Expect = 4e-40
 Identities = 79/133 (59%), Positives = 100/133 (75%), Gaps = 8/133 (6%)
 Frame = -3

Query: 579 TIHNGF---VLKDWSD--NKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSV 415
           ++HNG     ++ W+     KFET SYLPPLT +QIAKQVDFM+++   PCIEFD +GSV
Sbjct: 47  SVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSV 106

Query: 414 YREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 244
            R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+
Sbjct: 107 SRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKK 166

Query: 243 QVQVSGFLVQKPS 205
           QVQ+ GFLV +P+
Sbjct: 167 QVQICGFLVARPN 179


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  166 bits (419), Expect = 1e-39
 Identities = 70/111 (63%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 361
           KK+ETLSYLPPL+ E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW M
Sbjct: 67  KKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTM 126

Query: 360 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           WKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 127 WKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small
           chain OS=Vitis vinifera GN=GSVIVT00031354001 PE=3 SV=1
          Length = 169

 Score =  164 bits (416), Expect = 3e-39
 Identities = 73/130 (56%), Positives = 97/130 (74%), Gaps = 5/130 (3%)
 Frame = -3

Query: 579 TIHNG---FVLKDWS--DNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSV 415
           T+ NG     +K W+  +NKKFETLSYLPPL+ + IAK++D+M++KGW PC+EFD++G V
Sbjct: 38  TVSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYV 97

Query: 414 YREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQ 235
           +R++    GYYDGRYW +WKLPMFGC DA+ VL EI EC K YP A+IR L FD + Q Q
Sbjct: 98  FRKNSQIPGYYDGRYWTLWKLPMFGCNDASQVLNEIHECKKTYPNAYIRCLAFDNEHQGQ 157

Query: 234 VSGFLVQKPS 205
              F++QKP+
Sbjct: 158 CMAFVIQKPT 167


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  164 bits (415), Expect = 3e-39
 Identities = 73/113 (64%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
 Frame = -3

Query: 534 KFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 364
           KFET SYLPPLT +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW 
Sbjct: 102 KFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWT 161

Query: 363 MWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 205
           MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 162 MWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  164 bits (415), Expect = 3e-39
 Identities = 71/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
 Frame = -3

Query: 537 KKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 361
           KKFETLSYLP LT EQ++K+VD+++R GW PC+EF+ + G VYREH H  GYYDGRYW M
Sbjct: 68  KKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTM 127

Query: 360 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           WKLPMFGC D++ VL+E+ EC KEYP A+IR++GFD  RQVQ   F+  KP
Sbjct: 128 WKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  164 bits (415), Expect = 3e-39
 Identities = 73/113 (64%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
 Frame = -3

Query: 534 KFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 364
           KFET SYLPPLT +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW 
Sbjct: 72  KFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWT 131

Query: 363 MWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 205
           MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 132 MWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  162 bits (411), Expect = 1e-38
 Identities = 72/113 (63%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
 Frame = -3

Query: 534 KFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 364
           KFET SYLPPLT ++IAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW 
Sbjct: 71  KFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWT 130

Query: 363 MWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 205
           MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 131 MWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183