DK948446
Clone id TST38A01NGRL0003_F10
Library
Length 613
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_F10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CTCTCTCGCTGTCTTCTTCTTCGGAAGGGGTGGGAGATGGCGACCTTCGGGAGCTTCGCA
GGCCTTGCTGCGGGCGCCATGGGTGCCCTCTCAAGCTCCGAAATGCAGCTACTGGGCCTT
TACGACTACTCCGCATCGGGTTTCAGCCCAAAGTCCTCTTCCGAGGCTAGTCCTCCAGCA
CAGGATTCAAATCACCGCCTGCAGACGCCTGCACAAAGAAGTGGTTTACTGTCTCGATTT
GCTCTTGCAAAGCTTGCTCCTGAGTTCAATGGAATTGGTTGCTTTGACACAGTCTTTGGC
TGGCAGAGTCCTTGATGATGCGTAGCTTAGTTTTAGAAGATCCCTGAAGCAATCGAGGAT
AAGCTCTTTGTTTGTCATCTCATTTTGTGGACACTCAAAAAAGTAGCTATGCAGTTTTGG
CATTCGAGTGTCATGTTGGATTGATTTCTGGCTGTCTGCACGTGTGTGGATTCTCCCTTG
TAGGTGTTAATCTGAGAGGTGAGGTGGCTTCTTGTTTCCATCCGTTTTGGATGTCCCCTT
CAAGAGAATCTATTTTGTGTGGTTAACTGTGGACTCAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAACCC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948446|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_F10, 5'
(576 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9FL49
Definition tr|Q9FL49|Q9FL49_ARATH Similarity to unknown protein OS=Arabidopsis thaliana
Align length 61
Score (bit) 33.5
E-value 8.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948446|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_F10, 5'
(576 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9FL49|Q9FL49_ARATH Similarity to unknown protein OS=Arabidop... 33 8.6
tr|Q8RX56|Q8RX56_ARATH AT5g06970/MOJ9_14 OS=Arabidopsis thaliana... 33 8.6

>tr|Q9FL49|Q9FL49_ARATH Similarity to unknown protein OS=Arabidopsis
thaliana PE=4 SV=1
Length = 1105

Score = 33.5 bits (75), Expect = 8.6
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -3

Query: 373 KQRAYPRLLQGSSKTKLRIIKDSASQRLCQSNQFH*TQEQALQEQIETVNHFFVQASAGG 194
+ R LLQ S LR++ D + R+ FH ++ + L+E +E + FF+ +GG
Sbjct: 971 RDRIVTSLLQASLDGLLRVLLDGGASRV-----FHPSESKLLEEDVEVLKEFFI---SGG 1022

Query: 193 D 191
D
Sbjct: 1023 D 1023


>tr|Q8RX56|Q8RX56_ARATH AT5g06970/MOJ9_14 OS=Arabidopsis thaliana
GN=At5g06970 PE=2 SV=1
Length = 1101

Score = 33.5 bits (75), Expect = 8.6
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -3

Query: 373 KQRAYPRLLQGSSKTKLRIIKDSASQRLCQSNQFH*TQEQALQEQIETVNHFFVQASAGG 194
+ R LLQ S LR++ D + R+ FH ++ + L+E +E + FF+ +GG
Sbjct: 967 RDRIVTSLLQASLDGLLRVLLDGGASRV-----FHPSESKLLEEDVEVLKEFFI---SGG 1018

Query: 193 D 191
D
Sbjct: 1019 D 1019