DK948480 |
Clone id |
TST38A01NGRL0003_G21 |
Library |
TST38 |
Length |
647 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_G21. 5' end sequence. |
Accession |
DK948480 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1139Contig1 |
Sequence |
GTGGTGCTGATTACGGCAATTGTTACGGCGTGACGTTGGAGAGACGTTGGACCTCATTGT TGGCCGGCCATGGCGACATCCTTTTCTGCGTCAGACACTACCTTTCTGCTCCATCATCAC ACGTCTACAGATACTAACATCACGCGACCTCCCTTGCCGCCACGCAGAGGCGCGTTTGTA TCTTTTCGGCCTCTTCCTAAGGCGCGAGCTCGCCACAGCCAACTTCGCTGCAGAAGCTTG CGAGTATATGCCTTGGCCAGTGCCAGCAGTAACAACAATAACAACAGCTTGGATGATCTT GCAGCCCGCCTTGTGGATGCCGCTCGTTCTCTCAGCCAAAGAACAGGCCACATAATCGAA TCTGCTTGGCTTCAAACGGTTAAGTTTGTAGAGTCTCAGAATTTCCAGGGAAAGTTTGAG CAGGGGTTCAATGCTGCTAATCGCAAGGTTGAGGAGTTTACCTACGATGCCCGCAAAGGT GCCAAGGATTTTGATCGCCGGTTTAGGGTTTCAGAACGTGCACAAGAAATGAGTGATTTT GCTAGTCAGCAAGTGAAGAACTTTGATCAGCAGCTTGGTCTGGTGCAGAAATTTCGAAAT TTCTCTTCTGATCTTCAGAGAAATTGGCCTAGGTACAGACGGCAGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P49816 |
Definition |
sp|P49816|TSC2_RAT Tuberin OS=Rattus norvegicus |
Align length |
147 |
Score (bit) |
35.0 |
E-value |
0.32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RYD4 |
Definition |
tr|A9RYD4|A9RYD4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
69 |
Score (bit) |
70.9 |
E-value |
6.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948480|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0003_G21, 5' (632 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RYD4|A9RYD4_PHYPA Predicted protein (Fragment) OS=Physcomit... 71 6e-11 tr|B6TRA3|B6TRA3_MAIZE Putative uncharacterized protein OS=Zea m... 67 7e-10 tr|B4FHR1|B4FHR1_MAIZE Putative uncharacterized protein OS=Zea m... 67 1e-09 tr|Q8S7Q1|Q8S7Q1_ORYSJ Putative uncharacterized protein OSJNBa00... 64 8e-09 tr|Q0IVI4|Q0IVI4_ORYSJ Os10g0569000 protein OS=Oryza sativa subs... 64 8e-09 tr|A3C7H2|A3C7H2_ORYSJ Putative uncharacterized protein OS=Oryza... 64 8e-09 tr|A2ZAE5|A2ZAE5_ORYSI Putative uncharacterized protein OS=Oryza... 64 8e-09 tr|O22164|O22164_ARATH Expressed protein (Putative uncharacteriz... 59 2e-07 tr|A7PBG8|A7PBG8_VITVI Chromosome chr16 scaffold_10, whole genom... 50 1e-04 tr|A8IYI2|A8IYI2_CHLRE Predicted protein OS=Chlamydomonas reinha... 46 0.002 tr|B8PKV5|B8PKV5_9APHY Predicted protein OS=Postia placenta Mad-... 38 0.44 tr|B8A8C5|B8A8C5_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.58 tr|A2ZX28|A2ZX28_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.58 tr|Q1YP49|Q1YP49_9GAMM Extragenic suppressor protein SuhB OS=gam... 36 1.7 tr|Q4L9G8|Q4L9G8_STAHJ CapK protein OS=Staphylococcus haemolytic... 35 3.7 tr|Q22715|Q22715_CAEEL Protein T24B8.4, partially confirmed by t... 35 3.7 tr|B8P5T9|B8P5T9_9APHY Predicted protein OS=Postia placenta Mad-... 35 4.9 tr|A1L1D1|A1L1D1_XENTR LOC100036715 protein (Fragment) OS=Xenopu... 34 6.4 tr|Q6C8R0|Q6C8R0_YARLI YALI0D17710p OS=Yarrowia lipolytica GN=YA... 34 6.4 tr|B8P0Q4|B8P0Q4_9APHY Predicted protein OS=Postia placenta Mad-... 34 6.4 tr|Q6P100|Q6P100_DANRE SMEK homolog 2, suppressor of mek1 (Dicty... 34 8.3 tr|B6HNK7|B6HNK7_PENCH Pc21g05120 protein OS=Penicillium chrysog... 34 8.3
>tr|A9RYD4|A9RYD4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_121251 PE=4 SV=1 Length = 189
Score = 70.9 bits (172), Expect = 6e-11 Identities = 31/69 (44%), Positives = 49/69 (71%) Frame = +1
Query: 424 NRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNFDQQLGLVQKFRNFSSDLQ 603 N K EEF YD K +DR++RV+E+AQ++ ++A++Q +N D+Q G+ QK RN ++D + Sbjct: 8 NLKFEEFAYDFNKQLGKWDRQYRVTEKAQQVKEYATEQAQNVDRQFGIRQKARNATTDFR 67
Query: 604 RNWPRYRRQ 630 +P YRRQ Sbjct: 68 LKFPTYRRQ 76
>tr|B6TRA3|B6TRA3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 232
Score = 67.4 bits (163), Expect = 7e-10 Identities = 30/82 (36%), Positives = 47/82 (57%) Frame = +1
Query: 385 NFQGKFEQGFNAANRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNFDQQLG 564 +F G + + AN E F ++AR+ A+ D RF +S R + S A + D + G Sbjct: 39 DFDGFVRRAWQGANAGAERFAFEARQAAQRLDSRFSISRRLADASRAARARAVEIDAEFG 98
Query: 565 LVQKFRNFSSDLQRNWPRYRRQ 630 + +++R+FS D RNWPRYRR+ Sbjct: 99 IGRRWRSFSVDFSRNWPRYRRE 120
>tr|B4FHR1|B4FHR1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 183
Score = 66.6 bits (161), Expect = 1e-09 Identities = 30/81 (37%), Positives = 46/81 (56%) Frame = +1
Query: 385 NFQGKFEQGFNAANRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNFDQQLG 564 +F G + + AN E F ++AR+ A+ D RF +S R + S A + D + G Sbjct: 40 DFDGFVRRAWQGANAGAERFAFEARQAAQRLDSRFSISRRLADASRAARARAVEIDAEFG 99
Query: 565 LVQKFRNFSSDLQRNWPRYRR 627 + +++R+FS D RNWPRYRR Sbjct: 100 IGRRWRSFSVDFSRNWPRYRR 120
>tr|Q8S7Q1|Q8S7Q1_ORYSJ Putative uncharacterized protein OSJNBa0095C07.2 (Expressed protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0095C07.2 PE=4 SV=1 Length = 237
Score = 63.9 bits (154), Expect = 8e-09 Identities = 29/82 (35%), Positives = 46/82 (56%) Frame = +1
Query: 385 NFQGKFEQGFNAANRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNFDQQLG 564 +F G + + AN E ++ R+ A+ D RF +S R E + A + D +LG Sbjct: 44 DFDGFVRRAWRGANAGAERLAFEVRQTAQRLDGRFSISRRLAEAARAARARAVEIDAELG 103
Query: 565 LVQKFRNFSSDLQRNWPRYRRQ 630 + +++R+FS D RNWPRYRR+ Sbjct: 104 IGRRWRSFSVDFSRNWPRYRRE 125
>tr|Q0IVI4|Q0IVI4_ORYSJ Os10g0569000 protein OS=Oryza sativa subsp. japonica GN=Os10g0569000 PE=4 SV=1 Length = 195
Score = 63.9 bits (154), Expect = 8e-09 Identities = 29/82 (35%), Positives = 46/82 (56%) Frame = +1
Query: 385 NFQGKFEQGFNAANRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNFDQQLG 564 +F G + + AN E ++ R+ A+ D RF +S R E + A + D +LG Sbjct: 44 DFDGFVRRAWRGANAGAERLAFEVRQTAQRLDGRFSISRRLAEAARAARARAVEIDAELG 103
Query: 565 LVQKFRNFSSDLQRNWPRYRRQ 630 + +++R+FS D RNWPRYRR+ Sbjct: 104 IGRRWRSFSVDFSRNWPRYRRE 125
>tr|A3C7H2|A3C7H2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031244 PE=4 SV=1 Length = 143
Score = 63.9 bits (154), Expect = 8e-09 Identities = 29/82 (35%), Positives = 46/82 (56%) Frame = +1
Query: 385 NFQGKFEQGFNAANRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNFDQQLG 564 +F G + + AN E ++ R+ A+ D RF +S R E + A + D +LG Sbjct: 44 DFDGFVRRAWRGANAGAERLAFEVRQTAQRLDGRFSISRRLAEAARAARARAVEIDAELG 103
Query: 565 LVQKFRNFSSDLQRNWPRYRRQ 630 + +++R+FS D RNWPRYRR+ Sbjct: 104 IGRRWRSFSVDFSRNWPRYRRE 125
>tr|A2ZAE5|A2ZAE5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34714 PE=4 SV=1 Length = 243
Score = 63.9 bits (154), Expect = 8e-09 Identities = 29/82 (35%), Positives = 46/82 (56%) Frame = +1
Query: 385 NFQGKFEQGFNAANRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNFDQQLG 564 +F G + + AN E ++ R+ A+ D RF +S R E + A + D +LG Sbjct: 47 DFDGFVRRAWRGANAGAERLAFEVRQTAQRLDGRFSISRRLAEAARAARARAVEIDAELG 106
Query: 565 LVQKFRNFSSDLQRNWPRYRRQ 630 + +++R+FS D RNWPRYRR+ Sbjct: 107 IGRRWRSFSVDFSRNWPRYRRE 128
>tr|O22164|O22164_ARATH Expressed protein (Putative uncharacterized protein) (Putative uncharacterized protein unannotated coding sequence from BAC T13E15) OS=Arabidopsis thaliana GN=At2g44870 PE=2 SV=2 Length = 248
Score = 58.9 bits (141), Expect = 2e-07 Identities = 24/77 (31%), Positives = 46/77 (59%) Frame = +1
Query: 400 FEQGFNAANRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNFDQQLGLVQKF 579 + + +AN E+F ++A+K A+ DR++ VS R + A+ + + D++ G+ + Sbjct: 48 WRDAWRSANDGFEQFVFEAKKTAERIDRQYAVSRRFSSAASSAADRAREIDREFGITPRV 107
Query: 580 RNFSSDLQRNWPRYRRQ 630 R S+D RN+P+YR+Q Sbjct: 108 RTVSADFSRNFPKYRKQ 124
>tr|A7PBG8|A7PBG8_VITVI Chromosome chr16 scaffold_10, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014089001 PE=4 SV=1 Length = 302
Score = 50.1 bits (118), Expect = 1e-04 Identities = 23/77 (29%), Positives = 42/77 (54%) Frame = +1
Query: 400 FEQGFNAANRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNFDQQLGLVQKF 579 + + +AN E ++A+K A+ +R++ VS R E A + D++ + +++ Sbjct: 54 WRDAWRSANDGFELLIFEAKKTAERINRQYAVSRRFSEAVGSAGDWAREVDREFEIGRRW 113
Query: 580 RNFSSDLQRNWPRYRRQ 630 R + D RNWPRYR+Q Sbjct: 114 RTVTLDFGRNWPRYRKQ 130
>tr|A8IYI2|A8IYI2_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_157887 PE=4 SV=1 Length = 181
Score = 45.8 bits (107), Expect = 0.002 Identities = 23/87 (26%), Positives = 39/87 (44%) Frame = +1
Query: 370 FVESQNFQGKFEQGFNAANRKVEEFTYDARKGAKDFDRRFRVSERAQEMSDFASQQVKNF 549 F Q + K Q E+ AR+ D + +S + + + A + ++ Sbjct: 67 FAREQELEKKANQAMKKGGEVFEQAKDKARRVYVRLDSEYDISSKTAKAAKKAGEAARDI 126
Query: 550 DQQLGLVQKFRNFSSDLQRNWPRYRRQ 630 DQQ GL ++FR DL R WP +++Q Sbjct: 127 DQQYGLRRRFRAAREDLARKWPGWQKQ 153
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