DK948494 |
Clone id |
TST38A01NGRL0003_H11 |
Library |
TST38 |
Length |
665 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_H11. 5' end sequence. |
Accession |
DK948494 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1076Contig1 |
Sequence |
GGTTATGGCTTCGTGCTGTTCTCGTCTATCACTCACGTCGCCCTTCTTGTCCAAGCTAAT AGCTCCATCTCGGCTTCATCATCACCCAAGCTATGCAAGATTGGTCCCTCTTCTCCCGCC TTCATCGCTGTCTCGGCTTTGCTCGGCAACGTGCTCCGCGGCGACCTCAATTCAAATTCT GTGTCCTGATGCTGGAAGATCCCCTGCCATAGCTCGCAATGTCATAGACGTTCTTGAAGA GCGAGGTCTCATAGAGTCTCTCACCCACGAGGACATCAAGGCTGCATGCGCCCGCCCTTT TTCTACCCCCGTCAAGGTCTATTGCGGCTTTGATCCCACAGCAGAAAGCCTGCATCTTGG CAACTTGCTTGGGTTGATCGTGCTTTCATGGTTCCAGAGATGTGGCCATGTCCCTTTTGC GCTGCTCGGTGGAGCTACTGTCCGCGTTGGGGACCCATCTGGTAAGAGCGTTGAACGACC CACTCTTGATGAAGACACCATTGAAAGAAATTTGAAAGGTGTAGTAGCCAACATAGAGAA AGTTCTCAAGGTTAGGGAAAATGGGTCATCAGAAAATGCATGGCAGAGCGAAGAAGGAAT GCGCATGCATCCAGCCCGAGTACTCAACAACTATGAGTGGGGGAGCAAGTTCAGCCTATT GCAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6MC06 |
Definition |
sp|Q6MC06|SYY_PARUW Tyrosyl-tRNA synthetase OS=Protochlamydia amoebophila (strain UWE25) |
Align length |
148 |
Score (bit) |
119.0 |
E-value |
1.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RBJ1 |
Definition |
tr|A9RBJ1|A9RBJ1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
216 |
Score (bit) |
151.0 |
E-value |
3.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948494|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0003_H11, 5' (665 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RBJ1|A9RBJ1_PHYPA Predicted protein OS=Physcomitrella paten... 151 3e-35 tr|Q9M876|Q9M876_ARATH Putative tyrosyl-tRNA synthetase (At3g026... 142 1e-32 tr|Q943W5|Q943W5_ORYSJ cDNA clone:J013075A21, full insert sequen... 125 3e-27 tr|A2WQF7|A2WQF7_ORYSI Putative uncharacterized protein OS=Oryza... 125 3e-27 tr|A7QMU3|A7QMU3_VITVI Chromosome chr14 scaffold_128, whole geno... 124 7e-27 tr|A5C3T3|A5C3T3_VITVI Putative uncharacterized protein OS=Vitis... 124 7e-27 tr|B4FWY6|B4FWY6_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23 tr|A8JAY5|A8JAY5_CHLRE Predicted protein OS=Chlamydomonas reinha... 110 8e-23 tr|Q01EE8|Q01EE8_OSTTA TyrS Tyrosyl-tRNA synthetase, probable (I... 107 9e-22 tr|A2ZTJ0|A2ZTJ0_ORYSJ Putative uncharacterized protein OS=Oryza... 103 1e-20 tr|A4RSR2|A4RSR2_OSTLU Tyrosyl-tRNA synthetase, probable OS=Ostr... 101 5e-20 tr|A7V9D2|A7V9D2_BACUN Putative uncharacterized protein OS=Bacte... 92 4e-17 tr|A3U596|A3U596_9FLAO Tyrosyl-tRNA synthetase OS=Croceibacter a... 91 8e-17 tr|B0NS62|B0NS62_BACSE Putative uncharacterized protein OS=Bacte... 90 1e-16 tr|B6LDC8|B6LDC8_BRAFL Putative uncharacterized protein OS=Branc... 90 1e-16 tr|B6L0A0|B6L0A0_BRAFL Putative uncharacterized protein OS=Branc... 90 1e-16 tr|B7ALV0|B7ALV0_9BACE Putative uncharacterized protein OS=Bacte... 90 1e-16 tr|A3ZYI4|A3ZYI4_9PLAN Tyrosyl-tRNA synthetase OS=Blastopirellul... 88 5e-16 tr|B6XIE5|B6XIE5_9ENTR Putative uncharacterized protein OS=Provi... 87 9e-16 tr|B3C961|B3C961_9BACE Putative uncharacterized protein OS=Bacte... 87 9e-16 tr|B7GGP6|B7GGP6_9BACI Tyrosyl-tRNA synthetase OS=Anoxybacillus ... 86 2e-15 tr|B6X8B4|B6X8B4_9ENTR Putative uncharacterized protein OS=Provi... 86 2e-15 tr|A3VUE6|A3VUE6_9PROT Tyrosyl-tRNA synthetase OS=Parvularcula b... 86 2e-15 tr|B4UGQ8|B4UGQ8_ANASK Tyrosyl-tRNA synthetase OS=Anaeromyxobact... 86 3e-15 tr|B8JFS8|B8JFS8_9DELT Tyrosyl-tRNA synthetase OS=Anaeromyxobact... 86 3e-15 tr|A4BX41|A4BX41_9FLAO Tyrosyl-tRNA synthetase OS=Polaribacter i... 85 4e-15 tr|B6R4D3|B6R4D3_9RHOB Tyrosyl-tRNA synthetase OS=Pseudovibrio s... 85 5e-15 tr|A2TYL7|A2TYL7_9FLAO Tyrosyl-tRNA synthetase OS=Polaribacter s... 85 5e-15 tr|B5CUA7|B5CUA7_9BACE Putative uncharacterized protein OS=Bacte... 84 6e-15 tr|A8UJ46|A8UJ46_9FLAO Tyrosyl-tRNA synthetase OS=Flavobacterial... 84 6e-15
>tr|A9RBJ1|A9RBJ1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_62167 PE=3 SV=1 Length = 502
Score = 151 bits (382), Expect = 3e-35 Identities = 90/216 (41%), Positives = 125/216 (57%) Frame = +2
Query: 14 CCSRLSLTSPFLSKLIAPSRLHHHPSYARLVXXXXXXXXXRLCSATCSAATSIQILCPDA 193 CCS L+ S + +R +H + + L R +CSA+ S+ Sbjct: 22 CCSSLAFASRPSANAFLGARYGNHNTLSVL----------RRSVVSCSAS-SLSTAASAG 70
Query: 194 GRSPAIARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXXXXX 373 + ++RNV++VLEERGLIES+T E++KA C + +KVYCGFDPTAES Sbjct: 71 VAAEGVSRNVVEVLEERGLIESVTSEELKATCMKQ---RLKVYCGFDPTAESLHLGNLLG 127
Query: 374 XXXXSWFQRCGHVPFALLGGATVRVGDPSGKSVERPTLDEDTIERNLKGVVANIEKVLKV 553 SWFQRCGH+P AL+GGAT R+GDPSGKS ERP LD+DT+ RN+ G+ + +LK Sbjct: 128 IIVLSWFQRCGHIPVALIGGATGRIGDPSGKSKERPALDDDTLVRNVNGIRKILSNILK- 186
Query: 554 RENGSSENAWQSEEGMRMHPARVLNNYEWGSKFSLL 661 G+S+ + E+ + VLNNY+W + SLL Sbjct: 187 ---GNSD---EDEKVV------VLNNYDWLKEISLL 210
>tr|Q9M876|Q9M876_ARATH Putative tyrosyl-tRNA synthetase (At3g02660) OS=Arabidopsis thaliana GN=At3g02660 PE=2 SV=1 Length = 511
Score = 142 bits (359), Expect = 1e-32 Identities = 72/159 (45%), Positives = 97/159 (61%) Frame = +2
Query: 185 PDAGRSPAIARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXX 364 P+ NV+D+LEERGL+ES+T E++++AC+ P P++VYCGFDPTAES Sbjct: 73 PETENQAVFRPNVVDILEERGLLESITSENLRSACSDPKVAPLRVYCGFDPTAESLHLGN 132
Query: 365 XXXXXXXSWFQRCGHVPFALLGGATVRVGDPSGKSVERPTLDEDTIERNLKGVVANIEKV 544 SWFQRCGH L+GGAT RVGDPSGKS+ERP LD DT+E+N+ G+ I K+ Sbjct: 133 LLGIIVLSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGITKIIIKI 192
Query: 545 LKVRENGSSENAWQSEEGMRMHPARVLNNYEWGSKFSLL 661 L GS+ + S + NNY+W ++L Sbjct: 193 L-----GSNPSPGGSYV--------IFNNYDWWKDMTML 218
>tr|Q943W5|Q943W5_ORYSJ cDNA clone:J013075A21, full insert sequence OS=Oryza sativa subsp. japonica GN=B1080D07.16 PE=2 SV=1 Length = 497
Score = 125 bits (313), Expect = 3e-27 Identities = 71/169 (42%), Positives = 98/169 (57%), Gaps = 12/169 (7%) Frame = +2
Query: 191 AGRSPAIARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXXXX 370 A S I R+V++VL ERGL+E+ T E + +A A P +K YCGFDPTAES Sbjct: 39 AAASTVIRRSVVEVLRERGLVEATTSESLGSASASP--RELKAYCGFDPTAESLHLGNLL 96
Query: 371 XXXXXSWFQRCGHVPFALLGGATVRVGDPSGKSVERPTLDEDTIERNLKGVVANIEKVL- 547 SWF+RCGH AL+GGAT RVGDPSGKS ERP LD +E N + + I ++L Sbjct: 97 GLVVLSWFRRCGHNAVALVGGATGRVGDPSGKSAERPELDLAAVETNSNAIKSLIGQILD 156
Query: 548 ------KVRENGSSENAWQSEE-----GMRMHPARVLNNYEWGSKFSLL 661 + ++G + N Q+E+ G +M ++L+NY+W +LL Sbjct: 157 RAPEPSQHSQSGKNLNLEQNEQALVNSGEKMGSFQILDNYDWWKDITLL 205
>tr|A2WQF7|A2WQF7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02083 PE=3 SV=1 Length = 497
Score = 125 bits (313), Expect = 3e-27 Identities = 71/169 (42%), Positives = 98/169 (57%), Gaps = 12/169 (7%) Frame = +2
Query: 191 AGRSPAIARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXXXX 370 A S I R+V++VL ERGL+E+ T E + +A A P +K YCGFDPTAES Sbjct: 39 AAASTVIRRSVVEVLRERGLVEATTSESLGSASASP--RELKAYCGFDPTAESLHLGNLL 96
Query: 371 XXXXXSWFQRCGHVPFALLGGATVRVGDPSGKSVERPTLDEDTIERNLKGVVANIEKVL- 547 SWF+RCGH AL+GGAT RVGDPSGKS ERP LD +E N + + I ++L Sbjct: 97 GLVVLSWFRRCGHNAVALVGGATGRVGDPSGKSAERPELDLAAVETNSNAIKSLIGQILD 156
Query: 548 ------KVRENGSSENAWQSEE-----GMRMHPARVLNNYEWGSKFSLL 661 + ++G + N Q+E+ G +M ++L+NY+W +LL Sbjct: 157 RAPEPSQHSQSGKNLNLEQNEQALVNSGEKMGSFQILDNYDWWKDITLL 205
>tr|A7QMU3|A7QMU3_VITVI Chromosome chr14 scaffold_128, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002216001 PE=3 SV=1 Length = 485
Score = 124 bits (310), Expect = 7e-27 Identities = 63/153 (41%), Positives = 92/153 (60%) Frame = +2
Query: 203 PAIARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXXXXXXXX 382 P NVI++LE+RGL++S+T ++A+ + + +KVYCGFDPTAES Sbjct: 55 PLHRSNVIEILEQRGLVDSITSPILRASSS---TQTLKVYCGFDPTAESLHLGNLLGLIV 111
Query: 383 XSWFQRCGHVPFALLGGATVRVGDPSGKSVERPTLDEDTIERNLKGVVANIEKVLKVREN 562 SWF+RCGH AL+GGAT R+GDPSGKS+ERP L+ + +E+N G+ I +L Sbjct: 112 LSWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTT 171
Query: 563 GSSENAWQSEEGMRMHPARVLNNYEWGSKFSLL 661 ++++ VLNNY+W +F+LL Sbjct: 172 NGGDDSFV-----------VLNNYDWWKEFTLL 193
>tr|A5C3T3|A5C3T3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016956 PE=4 SV=1 Length = 868
Score = 124 bits (310), Expect = 7e-27 Identities = 63/153 (41%), Positives = 92/153 (60%) Frame = +2
Query: 203 PAIARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXXXXXXXX 382 P NVI++LE+RGL++S+T ++A+ + + +KVYCGFDPTAES Sbjct: 55 PLHRSNVIEILEQRGLVDSITSPILRASSS---TQTLKVYCGFDPTAESLHLGNLLGLIV 111
Query: 383 XSWFQRCGHVPFALLGGATVRVGDPSGKSVERPTLDEDTIERNLKGVVANIEKVLKVREN 562 SWF+RCGH AL+GGAT R+GDPSGKS+ERP L+ + +E+N G+ I +L Sbjct: 112 LSWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTT 171
Query: 563 GSSENAWQSEEGMRMHPARVLNNYEWGSKFSLL 661 ++++ VLNNY+W +F+LL Sbjct: 172 NGGDDSFV-----------VLNNYDWWKEFTLL 193
>tr|B4FWY6|B4FWY6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 496
Score = 112 bits (280), Expect = 2e-23 Identities = 68/166 (40%), Positives = 92/166 (55%), Gaps = 9/166 (5%) Frame = +2
Query: 191 AGRSPAIARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXXXX 370 A + A + V+DVL +RGL+E++T E + A ARP +KVYCGFDPTAES Sbjct: 43 APAATAASPGVVDVLMKRGLVEAITSEAL--AAARPGE--LKVYCGFDPTAESLHLGNLL 98
Query: 371 XXXXXSWFQRCGHVPFALLGGATVRVGDPSGKSVERPTLDEDTIERNLKGVVANIEKVL- 547 SWF+RCGH AL+GGAT RVGDPSGKS ERP L +E N + + + ++L Sbjct: 99 GLVALSWFRRCGHTAVALIGGATGRVGDPSGKSSERPELGIAAVEGNSDAIKSLVAQILG 158
Query: 548 KVRENGSSENAWQSE--------EGMRMHPARVLNNYEWGSKFSLL 661 +V E ++ Q E M +L+NY+W +LL Sbjct: 159 RVPEPAHRSHSGQKELSLDNSANSSQTMGSFLILDNYDWWKDITLL 204
>tr|A8JAY5|A8JAY5_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_139405 PE=3 SV=1 Length = 492
Score = 110 bits (275), Expect = 8e-23 Identities = 71/182 (39%), Positives = 96/182 (52%), Gaps = 6/182 (3%) Frame = +2
Query: 134 RLCSATCSAATSIQILCPDAGRSPAIAR-----NVIDVLEERGLIESLTH-EDIKAACAR 295 RL S +AA + P A S +A N++ +L RGLI+ +T+ E+++ A A Sbjct: 29 RLVSHVAAAAAEVAE-APAASTSAPLAGLDGRPNIVSLLRARGLIQEVTNTEELERAAA- 86
Query: 296 PFSTPVKVYCGFDPTAESXXXXXXXXXXXXSWFQRCGHVPFALLGGATVRVGDPSGKSVE 475 + + VYCGFDPTA+S +WFQRCGH P ALLGGAT RVGDPSG+S E Sbjct: 87 --AGRLSVYCGFDPTADSLHLGNLLGIVVLAWFQRCGHEPVALLGGATGRVGDPSGRSTE 144
Query: 476 RPTLDEDTIERNLKGVVANIEKVLKVRENGSSENAWQSEEGMRMHPARVLNNYEWGSKFS 655 RP L E+ IE N+ + N+ + + VR + A RVLNN +W Sbjct: 145 RPVLSEEQIEHNVTS-IGNLLRGILVRNSPPDAPA-----------VRVLNNLDWFGSMG 192
Query: 656 LL 661 L Sbjct: 193 FL 194
>tr|Q01EE8|Q01EE8_OSTTA TyrS Tyrosyl-tRNA synthetase, probable (IC) OS=Ostreococcus tauri GN=TyrS PE=3 SV=2 Length = 488
Score = 107 bits (266), Expect = 9e-22 Identities = 67/157 (42%), Positives = 82/157 (52%) Frame = +2
Query: 191 AGRSPAIARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXXXX 370 A S A ++I L+ RGL +S T E + A P+KVYCGFDPTA+S Sbjct: 54 ACNSSASDEDLITTLKARGLFDSCTDE---TSLAEALQKPLKVYCGFDPTADSLHLGNLL 110
Query: 371 XXXXXSWFQRCGHVPFALLGGATVRVGDPSGKSVERPTLDEDTIERNLKGVVANIEKVLK 550 SWFQR GH P L+GGAT RVGDPSGKS ERP LDE T+ N V A VL+ Sbjct: 111 GIVVLSWFQRKGHRPIILVGGATGRVGDPSGKSQERPLLDEATLSTN---VAAISNSVLR 167
Query: 551 VRENGSSENAWQSEEGMRMHPARVLNNYEWGSKFSLL 661 + +S A VL+NY+W +LL Sbjct: 168 ILTRAASNPA-----------VVVLDNYDWFRNITLL 193
>tr|A2ZTJ0|A2ZTJ0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001862 PE=3 SV=1 Length = 545
Score = 103 bits (257), Expect = 1e-20 Identities = 61/151 (40%), Positives = 81/151 (53%), Gaps = 1/151 (0%) Frame = +2
Query: 212 ARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXXXXXXXXXSW 391 A + VL ERGL+E+ T E + +A A P +K YCGFDPTAES SW Sbjct: 118 ATRPVSVLRERGLVEATTSESLGSASASP--RELKAYCGFDPTAESLHLGNLLGLVVLSW 175
Query: 392 FQRCGHVPFALLGGATVRVGDPSGKSVERPTLDEDTIERNLKGVVANIEKVL-KVRENGS 568 F+RCGH AL+GGAT RVG PSGKS ERP L+ +E N + + I ++L + E + Sbjct: 176 FRRCGHNAVALVGGATGRVGYPSGKSPERPELELAAVETNSNAIKSLIGQILDRAPEPSN 235
Query: 569 SENAWQSEEGMRMHPARVLNNYEWGSKFSLL 661 N +L+NY+W +LL Sbjct: 236 IRNP-------------ILDNYDWWKDITLL 253
Score = 80.1 bits (196), Expect = 1e-13 Identities = 41/83 (49%), Positives = 51/83 (61%) Frame = +2
Query: 191 AGRSPAIARNVIDVLEERGLIESLTHEDIKAACARPFSTPVKVYCGFDPTAESXXXXXXX 370 A S I R+V++VL ERGL+E+ T E + +A A P +K YCGFDPTAES Sbjct: 39 AAASTVIRRSVVEVLRERGLVEATTSESLGSASASP--RELKAYCGFDPTAESLHLGNLL 96
Query: 371 XXXXXSWFQRCGHVPFALLGGAT 439 SWF+RCGH AL+GGAT Sbjct: 97 GLVVLSWFRRCGHNAVALVGGAT 119
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