BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948503|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_H20, 5'
         (679 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase...    33   1.8  
sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18 OS=Schizosa...    32   4.0  
sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp....    30   9.1  

>sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase
           component HRD3 OS=Saccharomyces cerevisiae GN=HRD3 PE=1
           SV=1
          Length = 833

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +3

Query: 495 TISPHLSVKRRLVYQRLFALQLGNSWLKSPMPRKWHVGFN--KQF-KNLFFYSDL 650
           T+ P  S K  L YQR  A QLGN   K  +  K++ GFN  + F K+L  Y D+
Sbjct: 165 TVIPQDSAKALLYYQR--AAQLGNLKAKQVLAYKYYSGFNVPRNFHKSLVLYRDI 217


>sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18
           OS=Schizosaccharomyces pombe GN=SPBC119.18 PE=2 SV=1
          Length = 69

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 579 SPMPRKWHVGFNKQFKNLFFYSDLHNREC 665
           +P  +K+   FN  + N F   DLHNR+C
Sbjct: 10  TPAKKKYDACFNDWYANKFLKGDLHNRDC 38


>sp|Q2JW78|DNAJ_SYNJA Chaperone protein dnaJ OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1
          Length = 394

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 229 GPHEISSSFHELSGVGGFAKLASPSDRDYLGLRAGFLPSRDKPVSTHNL 375
           G    +S F + +G+GGFA L      ++ G   G+  SR  PV   +L
Sbjct: 74  GAAAAASGFQDFAGIGGFADLFESFFTNFAGGGVGYSRSRQGPVRGDDL 122

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948503|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_H20, 5'
         (679 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein OS=Crypt...    37   1.5  
tr|B6TAR5|B6TAR5_MAIZE Prenyl transferase OS=Zea mays PE=2 SV=1        34   7.5  
tr|Q1DLV9|Q1DLV9_COCIM Putative uncharacterized protein OS=Cocci...    34   7.5  

>tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein
            OS=Cryptosporidium muris RN66 GN=CMU_027500 PE=4 SV=1
          Length = 1841

 Score = 36.6 bits (83), Expect = 1.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 564  NSWLKSPMPRKWHVGFNKQFKNLFFYSDLHNREC 665
            N WL  P  + W VG+NK   N ++ S++ N +C
Sbjct: 1626 NGWLTHPCIKSWDVGYNKSLGNKYYNSEILNFDC 1659


>tr|B6TAR5|B6TAR5_MAIZE Prenyl transferase OS=Zea mays PE=2 SV=1
          Length = 407

 Score = 34.3 bits (77), Expect = 7.5
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 153 LICLSCYCSFVEKKSKAEI--GHALSCFCMSRWVSTNLPKKRRRT 25
           ++ LSC C  V   SK  +  GH ++  C SRW     P +RRRT
Sbjct: 1   MLSLSCSCPGVSSMSKTALDWGHLVAS-CRSRWHGARAPPRRRRT 44


>tr|Q1DLV9|Q1DLV9_COCIM Putative uncharacterized protein
           OS=Coccidioides immitis GN=CIMG_08704 PE=4 SV=1
          Length = 828

 Score = 34.3 bits (77), Expect = 7.5
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -2

Query: 177 QLSEIDLQLICLSCYCSFVEKKSKAEIGHALSCFCMSRWVST 52
           Q+SE D  LICLS Y +  E +  A+ GH     C+  W++T
Sbjct: 757 QISENDRCLICLSDYAAEEEVRLLAKCGHIYHRECIDEWLTT 798