DK948519 |
Clone id |
TST38A01NGRL0003_I12 |
Library |
TST38 |
Length |
660 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_I12. 5' end sequence. |
Accession |
DK948519 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1893Contig1 |
Sequence |
CCGCATAGCATCCGCCTCAAGACATTCGCCGAAGGATCTTTCAAGAGGTGGGCACCCAAA TTTCCAGCCTGGAGGTGGGTTCCGAAGTGCAAAGTGGGTCCATGAGCGGGCATATTTATC TGCTCATGGGCCCATGTCGCACATCAGAAATGCTCAGAAAACGAATGGTTTTGTCAGTTT CGGTCGGTATTGCTGGAGGACAGCTTGGGAAACATCAAGAAGACCTACAGTACCTCTTCC GCCTATTGGAGCGATTGCGAAAGCTTTCAGTGTTACATGTGCACACTCCCACCTTCCTAT CGGCATATTGGCAATTGTTCTTGGAAGCCATTCTGTGGCACATGCCCAGACGCATGCTGT TTCTTTGCCAAGCAATCCATCATCATTGGCATTATCAGCGGTGCACACATTTTTTGACCT ATGTGGGTTAGTTACAAGATCTGTGTACTTGTGGATCCTCTTCATGCCGGCCATATTGAC AGCTCCTTTTGCAAGCATGTTTGGGGGCTACTTTTGGCGGGCGTGGTTGCAACTTGTGCA CCACACTTTGGAGTTTGCAGGTGCAGCTTTTATCAAGTGGGGACAATGGGCTGCCACCCG ACCAGATTTGTTTCCGAAGGATCTTTGCGCAGAGCTGGAAAAGCTGCACTCAAATGCACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9P7M0 |
Definition |
sp|Q9P7M0|YOS3_SCHPO ABC1 family protein C21C3.03, mitochondrial OS=Schizosaccharomyces pombe |
Align length |
84 |
Score (bit) |
68.9 |
E-value |
2.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LL04 |
Definition |
tr|B8LL04|B8LL04_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
150 |
Score (bit) |
129.0 |
E-value |
2.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948519|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0003_I12, 5' (660 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LL04|B8LL04_PICSI Putative uncharacterized protein OS=Picea... 129 2e-28 tr|A9SKE9|A9SKE9_PHYPA Predicted protein OS=Physcomitrella paten... 113 9e-24 tr|B6U2C9|B6U2C9_MAIZE Protein kinase-like OS=Zea mays PE=2 SV=1 112 2e-23 tr|Q8S3N5|Q8S3N5_ORYSJ Putative 62.8 kDa protein (Putative uncha... 110 1e-22 tr|Q7XR01|Q7XR01_ORYSJ OSJNBa0015K02.12 protein OS=Oryza sativa ... 110 1e-22 tr|Q0J9D1|Q0J9D1_ORYSJ Os04g0660200 protein (Fragment) OS=Oryza ... 110 1e-22 tr|Q01JL8|Q01JL8_ORYSA H0112G12.2 protein OS=Oryza sativa GN=H01... 110 1e-22 tr|B7F5N2|B7F5N2_ORYSJ cDNA clone:J013044B08, full insert sequen... 110 1e-22 tr|A2XYJ4|A2XYJ4_ORYSI Putative uncharacterized protein OS=Oryza... 110 1e-22 tr|Q2HTV1|Q2HTV1_MEDTR Protein kinase-like OS=Medicago truncatul... 107 8e-22 tr|B7ZWW5|B7ZWW5_MAIZE Putative uncharacterized protein OS=Zea m... 106 1e-21 tr|Q6Z415|Q6Z415_ORYSJ Os07g0558000 protein OS=Oryza sativa subs... 104 4e-21 tr|B8B7J1|B8B7J1_ORYSI Putative uncharacterized protein OS=Oryza... 104 4e-21 tr|A3BL36|A3BL36_ORYSJ Putative uncharacterized protein OS=Oryza... 104 4e-21 tr|A8IBE0|A8IBE0_CHLRE Predicted protein OS=Chlamydomonas reinha... 100 1e-19 tr|Q8L6Y8|Q8L6Y8_ARATH Putative uncharacterized protein At1g6164... 91 6e-17 tr|Q3ECK9|Q3ECK9_ARATH Uncharacterized protein At1g61640.2 OS=Ar... 91 6e-17 tr|Q9LPZ6|Q9LPZ6_ARATH T23J18.5 OS=Arabidopsis thaliana PE=4 SV=1 89 2e-16 tr|A7R084|A7R084_VITVI Chromosome undetermined scaffold_298, who... 87 9e-16 tr|A9S7E7|A9S7E7_PHYPA Predicted protein (Fragment) OS=Physcomit... 85 3e-15 tr|A9S7D2|A9S7D2_PHYPA Predicted protein OS=Physcomitrella paten... 85 5e-15 tr|Q5KP53|Q5KP53_CRYNE Mitochondrion protein, putative (Putative... 69 2e-10 tr|A4S6Z2|A4S6Z2_OSTLU Predicted protein OS=Ostreococcus lucimar... 69 3e-10 tr|A2R2C4|A2R2C4_ASPNC Similarity to hypothetical membrane prote... 68 4e-10 tr|Q00VK5|Q00VK5_OSTTA Predicted unusual protein kinase (ISS) OS... 67 7e-10 tr|A5DGL5|A5DGL5_PICGU Putative uncharacterized protein OS=Pichi... 67 7e-10 tr|Q9SY86|Q9SY86_ARATH T25B24.1 protein OS=Arabidopsis thaliana ... 67 1e-09 tr|A1C907|A1C907_ASPCL Ubiquinone biosynthesis protein, putative... 66 2e-09 tr|Q5AXI4|Q5AXI4_EMENI Putative uncharacterized protein OS=Emeri... 65 3e-09 tr|A5E4D1|A5E4D1_LODEL ABC1 family protein OS=Lodderomyces elong... 65 3e-09
>tr|B8LL04|B8LL04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 657
Score = 129 bits (324), Expect = 2e-28 Identities = 72/150 (48%), Positives = 87/150 (58%), Gaps = 10/150 (6%) Frame = +2
Query: 239 PPIGAIAKAFSVTCAHSHLPIGILAIVLGSHSVAHAQTHXXXXXXXXXXXXXXXXH---- 406 P I IA+A S+ C SHL ILA+++G S AH + Sbjct: 138 PAISKIARAVSLACVRSHLTPRILAVIIGEASWAHNSWAESQELYPSVPLNSQVINRHAI 197
Query: 407 ------TFFDLCGLVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAA 568 +F + LV R++YL LF PAI+ AP ASMF G + WLQLVH +LE AGAA Sbjct: 198 FTSSIWSFLEGLILVIRALYLITLFTPAIVMAPLASMFEGRYRERWLQLVHRSLEKAGAA 257
Query: 569 FIKWGQWAATRPDLFPKDLCAELEKLHSNA 658 FIKWGQWAATRPDLFP+DLC EL KLH+ A Sbjct: 258 FIKWGQWAATRPDLFPRDLCKELAKLHTKA 287
>tr|A9SKE9|A9SKE9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_213247 PE=4 SV=1 Length = 492
Score = 113 bits (283), Expect = 9e-24 Identities = 53/84 (63%), Positives = 62/84 (73%) Frame = +2
Query: 407 TFFDLCGLVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAAFIKWGQ 586 T +L LV R+ YL +LF PAI+ APFA FG F + W+ LVH +LE GAAFIKWGQ Sbjct: 43 TLLELVLLVIRATYLAVLFTPAIVLAPFADSFGPKFRKRWISLVHFSLEHGGAAFIKWGQ 102
Query: 587 WAATRPDLFPKDLCAELEKLHSNA 658 WAA RPDLFP+DLCA+L KLHS A Sbjct: 103 WAAARPDLFPRDLCAQLTKLHSKA 126
>tr|B6U2C9|B6U2C9_MAIZE Protein kinase-like OS=Zea mays PE=2 SV=1 Length = 625
Score = 112 bits (281), Expect = 2e-23 Identities = 51/81 (62%), Positives = 61/81 (75%) Frame = +2
Query: 416 DLCGLVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAAFIKWGQWAA 595 +L ++ RS+YL +LF P+IL APFA G + + WL+LVH TLE AG AFIKWGQWAA Sbjct: 175 ELVIIIFRSIYLALLFTPSILMAPFAETLGSKYRKTWLRLVHRTLELAGPAFIKWGQWAA 234
Query: 596 TRPDLFPKDLCAELEKLHSNA 658 TRPDLFP DLC EL KLH+ A Sbjct: 235 TRPDLFPSDLCTELSKLHTKA 255
>tr|Q8S3N5|Q8S3N5_ORYSJ Putative 62.8 kDa protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=24K23.22 PE=4 SV=1 Length = 694
Score = 110 bits (274), Expect = 1e-22 Identities = 51/81 (62%), Positives = 61/81 (75%) Frame = +2
Query: 416 DLCGLVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAAFIKWGQWAA 595 +L ++ RS+YL +LF P+IL APFA G + + WL+LVH TLE AG AFIKWGQWAA Sbjct: 244 ELVIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAA 303
Query: 596 TRPDLFPKDLCAELEKLHSNA 658 TRPDLF DLCAEL KLH+ A Sbjct: 304 TRPDLFESDLCAELSKLHTKA 324
>tr|Q7XR01|Q7XR01_ORYSJ OSJNBa0015K02.12 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0015K02.12 PE=4 SV=1 Length = 694
Score = 110 bits (274), Expect = 1e-22 Identities = 51/81 (62%), Positives = 61/81 (75%) Frame = +2
Query: 416 DLCGLVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAAFIKWGQWAA 595 +L ++ RS+YL +LF P+IL APFA G + + WL+LVH TLE AG AFIKWGQWAA Sbjct: 244 ELVIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAA 303
Query: 596 TRPDLFPKDLCAELEKLHSNA 658 TRPDLF DLCAEL KLH+ A Sbjct: 304 TRPDLFESDLCAELSKLHTKA 324
>tr|Q0J9D1|Q0J9D1_ORYSJ Os04g0660200 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0660200 PE=4 SV=1 Length = 662
Score = 110 bits (274), Expect = 1e-22 Identities = 51/81 (62%), Positives = 61/81 (75%) Frame = +2
Query: 416 DLCGLVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAAFIKWGQWAA 595 +L ++ RS+YL +LF P+IL APFA G + + WL+LVH TLE AG AFIKWGQWAA Sbjct: 212 ELVIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAA 271
Query: 596 TRPDLFPKDLCAELEKLHSNA 658 TRPDLF DLCAEL KLH+ A Sbjct: 272 TRPDLFESDLCAELSKLHTKA 292
>tr|Q01JL8|Q01JL8_ORYSA H0112G12.2 protein OS=Oryza sativa GN=H0112G12.2 PE=4 SV=1 Length = 694
Score = 110 bits (274), Expect = 1e-22 Identities = 51/81 (62%), Positives = 61/81 (75%) Frame = +2
Query: 416 DLCGLVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAAFIKWGQWAA 595 +L ++ RS+YL +LF P+IL APFA G + + WL+LVH TLE AG AFIKWGQWAA Sbjct: 244 ELVIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAA 303
Query: 596 TRPDLFPKDLCAELEKLHSNA 658 TRPDLF DLCAEL KLH+ A Sbjct: 304 TRPDLFESDLCAELSKLHTKA 324
>tr|B7F5N2|B7F5N2_ORYSJ cDNA clone:J013044B08, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 629
Score = 110 bits (274), Expect = 1e-22 Identities = 51/81 (62%), Positives = 61/81 (75%) Frame = +2
Query: 416 DLCGLVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAAFIKWGQWAA 595 +L ++ RS+YL +LF P+IL APFA G + + WL+LVH TLE AG AFIKWGQWAA Sbjct: 179 ELVIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAA 238
Query: 596 TRPDLFPKDLCAELEKLHSNA 658 TRPDLF DLCAEL KLH+ A Sbjct: 239 TRPDLFESDLCAELSKLHTKA 259
>tr|A2XYJ4|A2XYJ4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17767 PE=4 SV=1 Length = 694
Score = 110 bits (274), Expect = 1e-22 Identities = 51/81 (62%), Positives = 61/81 (75%) Frame = +2
Query: 416 DLCGLVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAAFIKWGQWAA 595 +L ++ RS+YL +LF P+IL APFA G + + WL+LVH TLE AG AFIKWGQWAA Sbjct: 244 ELVIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAA 303
Query: 596 TRPDLFPKDLCAELEKLHSNA 658 TRPDLF DLCAEL KLH+ A Sbjct: 304 TRPDLFESDLCAELSKLHTKA 324
>tr|Q2HTV1|Q2HTV1_MEDTR Protein kinase-like OS=Medicago truncatula GN=MtrDRAFT_AC149642g9v2 PE=4 SV=1 Length = 630
Score = 107 bits (266), Expect = 8e-22 Identities = 49/77 (63%), Positives = 60/77 (77%) Frame = +2
Query: 428 LVTRSVYLWILFMPAILTAPFASMFGGYFWRAWLQLVHHTLEFAGAAFIKWGQWAATRPD 607 L+ R++YL ILF P+IL AP A FG F + WL++VH TLE AG AFIKWGQWAATRPD Sbjct: 185 LLGRAIYLAILFSPSILMAPLADYFGPEFRKMWLRVVHRTLERAGPAFIKWGQWAATRPD 244
Query: 608 LFPKDLCAELEKLHSNA 658 LFP+D+C +L +LHS A Sbjct: 245 LFPQDICTKLAELHSKA 261
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