NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948545
Clone id TST38A01NGRL0003_J15
Library
Length 668
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_J15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CTGCTACATTGCAAGTGACTGTGAGGGAGGGTGAGCCTTTGATATGGCAACAATGGCGGC
TGCAGCGCTTTCTTCAAGCACCTTCGCCGGCCAGGCTGTGTATAAGCCCCAGAGCGAGCT
GAGCTCTAAGGTAGGCAATGTGGGCGAGGCCCGCGTGTCCATGAGGAAAACAGTGTCAAA
GAGCTCCGACAGCCCCTGGTATGGCCCCGACCGCGTGAAGTACCTTGGCCCTTTCTCCGG
CGAGGCCCCCAGCTATCTCAAGGGAGAATTTCCCGGCGACTACGGCTGGGACACCGCCGG
CCTGTCTGCCGACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATTCACGCACG
GTGGGCTATGTTGGGAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGTGT
GAAGTTTGGCGAGGCCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGGCT
TGACTACTTGGGCAACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCCATCTGGGCATG
TCAGGTAATTCTCATGGGCGCTGTTGAGGGATACAGAGTGGCAGGTGGGCCCCTGGGCGA
GGTGGAGGATCCCATCTACCCTGGTGGCTCCTTTGACCCCTTGGGCCTGGCAGACGACCC
GGAGGCAT
■■Homology search results ■■ -
sp_hit_id P12329
Definition sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
Align length 184
Score (bit) 341.0
E-value 2.0e-93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948545|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_J15, 5'
         (668 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   341   2e-93
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   338   2e-92
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   337   3e-92
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   337   3e-92
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   337   3e-92
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   335   1e-91
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   335   1e-91
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   335   1e-91
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   335   1e-91
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   335   2e-91
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   335   2e-91
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   335   2e-91
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   334   2e-91
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   333   6e-91
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   333   6e-91
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   332   8e-91
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   332   1e-90
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   331   2e-90
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   331   2e-90
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   331   2e-90
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   330   3e-90
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   330   3e-90
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   330   4e-90
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   330   4e-90
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   330   5e-90
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   330   5e-90
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   330   5e-90
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   329   9e-90
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   328   2e-89
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   327   3e-89

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  341 bits (874), Expect = 2e-93
 Identities = 160/184 (86%), Positives = 172/184 (93%), Gaps = 4/184 (2%)
 Frame = +2

Query: 128 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 295
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 296 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 475
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 476 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 655
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 656 DPEA 667
           DPEA
Sbjct: 199 DPEA 202


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  338 bits (867), Expect = 2e-92
 Identities = 166/195 (85%), Positives = 181/195 (92%), Gaps = 3/195 (1%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 259
           GQ++ KP +ELS KV GNV EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14  GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 260 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 439
            GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 440 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 619
           WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 192

Query: 620 PGGSFDPLGLADDPE 664
           PGGSFDPLGLADDP+
Sbjct: 193 PGGSFDPLGLADDPD 207



 Score = 30.8 bits (68), Expect = 6.8
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 269 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 418
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  337 bits (865), Expect = 3e-92
 Identities = 168/189 (88%), Positives = 171/189 (90%), Gaps = 1/189 (0%)
 Frame = +2

Query: 104 KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 280
           KP +ELS KVG  GEARV M    SK+ S S WYG DR  YLGPFSG  PSYL GEFPGD
Sbjct: 18  KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76

Query: 281 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 460
           YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 77  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 461 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 640
           IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196

Query: 641 LGLADDPEA 667
           LGLADDPEA
Sbjct: 197 LGLADDPEA 205


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  337 bits (865), Expect = 3e-92
 Identities = 161/177 (90%), Positives = 168/177 (94%), Gaps = 2/177 (1%)
 Frame = +2

Query: 143 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 316
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 317 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 496
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 497 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 667
           PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEA
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 205


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  337 bits (864), Expect = 3e-92
 Identities = 159/180 (88%), Positives = 167/180 (92%), Gaps = 4/180 (2%)
 Frame = +2

Query: 140 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 307
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 308 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 487
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 488 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 667
           LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEA
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEA 207


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  335 bits (860), Expect = 1e-91
 Identities = 159/179 (88%), Positives = 167/179 (93%), Gaps = 4/179 (2%)
 Frame = +2

Query: 143 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 310
           G  RV+MRKT +K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 311 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 490
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 491 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 667
           GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEA
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEA 207


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  335 bits (860), Expect = 1e-91
 Identities = 159/177 (89%), Positives = 167/177 (94%), Gaps = 2/177 (1%)
 Frame = +2

Query: 143 GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 316
           G A+ +MRKT SKS  S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADP
Sbjct: 19  GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 317 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 496
           ETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 79  ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 497 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 667
           PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADDPEA
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEA 195


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  335 bits (859), Expect = 1e-91
 Identities = 163/196 (83%), Positives = 175/196 (89%), Gaps = 3/196 (1%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 259
           GQAV     +LS     + G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15  GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 260 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 439
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 440 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 619
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 189

Query: 620 PGGSFDPLGLADDPEA 667
           PGGSFDPLGLA+DPEA
Sbjct: 190 PGGSFDPLGLAEDPEA 205


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
           chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
          Length = 266

 Score =  335 bits (859), Expect = 1e-91
 Identities = 164/197 (83%), Positives = 173/197 (87%), Gaps = 4/197 (2%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSY 256
           G+AV  P S   +     G  + +MRKTV+K    SS SPWYGPDRVKYLGPFSGEAPSY
Sbjct: 15  GKAVNVPSSSQIT-----GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSY 69

Query: 257 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEA 436
           L GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A+NGVKFGEA
Sbjct: 70  LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 129

Query: 437 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 616
           VWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+
Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPL 189

Query: 617 YPGGSFDPLGLADDPEA 667
           YPGGSFDPLGLADDPEA
Sbjct: 190 YPGGSFDPLGLADDPEA 206


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
          Length = 267

 Score =  335 bits (858), Expect = 2e-91
 Identities = 159/179 (88%), Positives = 166/179 (92%), Gaps = 4/179 (2%)
 Frame = +2

Query: 143 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 310
           G  +  MRKTV+K    SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 88

Query: 311 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 490
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 491 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 667
           GNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEA
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEA 207
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 192
Score (bit) 349.0
E-value 8.0e-95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948545|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_J15, 5'
         (668 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   349   8e-95
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   346   7e-94
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   345   1e-93
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   345   1e-93
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   344   2e-93
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   344   3e-93
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   341   2e-92
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   341   2e-92
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   341   3e-92
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   340   4e-92
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   339   8e-92
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   339   8e-92
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   339   1e-91
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   338   2e-91
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   338   2e-91
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   338   2e-91
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   338   2e-91
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   338   2e-91
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   338   2e-91
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   338   2e-91
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   338   2e-91
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   337   3e-91
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   337   4e-91
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   337   4e-91
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   337   5e-91
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   337   5e-91
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   336   7e-91
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   336   7e-91
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   336   7e-91
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin...   336   9e-91

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  349 bits (896), Expect = 8e-95
 Identities = 169/192 (88%), Positives = 179/192 (93%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 268
           GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 269 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 448
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 449 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 628
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGG
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGG 192

Query: 629 SFDPLGLADDPE 664
           SFDPLGLADDP+
Sbjct: 193 SFDPLGLADDPD 204


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  346 bits (888), Expect = 7e-94
 Identities = 168/198 (84%), Positives = 180/198 (90%), Gaps = 5/198 (2%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 253
           GQ V KPQ+E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16  GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 254 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 433
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 434 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 613
           AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192

Query: 614 IYPGGSFDPLGLADDPEA 667
           IYPGGSFDPLGLADDP+A
Sbjct: 193 IYPGGSFDPLGLADDPDA 210


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  345 bits (885), Expect = 1e-93
 Identities = 169/194 (87%), Positives = 180/194 (92%), Gaps = 2/194 (1%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 262
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 263 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 442
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 443 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 622
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 623 GGSFDPLGLADDPE 664
           GGSFDPLGLADDP+
Sbjct: 194 GGSFDPLGLADDPD 207


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  345 bits (885), Expect = 1e-93
 Identities = 169/194 (87%), Positives = 180/194 (92%), Gaps = 2/194 (1%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 262
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 263 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 442
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 443 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 622
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 623 GGSFDPLGLADDPE 664
           GGSFDPLGLADDP+
Sbjct: 194 GGSFDPLGLADDPD 207


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  344 bits (883), Expect = 2e-93
 Identities = 168/194 (86%), Positives = 180/194 (92%), Gaps = 2/194 (1%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 262
           GQ V KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 263 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 442
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 443 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 622
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 623 GGSFDPLGLADDPE 664
           GGSFDPLGLADDP+
Sbjct: 193 GGSFDPLGLADDPD 206


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  344 bits (882), Expect = 3e-93
 Identities = 167/194 (86%), Positives = 181/194 (93%), Gaps = 2/194 (1%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 262
           GQ++ KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 263 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 442
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 443 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 622
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 623 GGSFDPLGLADDPE 664
           GGSFDPLGLADDP+
Sbjct: 193 GGSFDPLGLADDPD 206


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  341 bits (875), Expect = 2e-92
 Identities = 166/194 (85%), Positives = 180/194 (92%), Gaps = 2/194 (1%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 262
           GQ++ KP +ELS KVG+  +ARV+MR+TV+KS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 263 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 442
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 443 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 622
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 623 GGSFDPLGLADDPE 664
           GGSFDPLGLADDP+
Sbjct: 193 GGSFDPLGLADDPD 206


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  341 bits (875), Expect = 2e-92
 Identities = 168/194 (86%), Positives = 179/194 (92%), Gaps = 2/194 (1%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 262
           GQ++ KP +ELS KVGNV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 263 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 442
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 443 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 622
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYP 192

Query: 623 GGSFDPLGLADDPE 664
           GGSFDPLGLADDP+
Sbjct: 193 GGSFDPLGLADDPD 206


>tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 262

 Score =  341 bits (874), Expect = 3e-92
 Identities = 160/184 (86%), Positives = 172/184 (93%), Gaps = 4/184 (2%)
 Frame = +2

Query: 128 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 295
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 296 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 475
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 476 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 655
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 656 DPEA 667
           DPEA
Sbjct: 199 DPEA 202


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
          Length = 267

 Score =  340 bits (873), Expect = 4e-92
 Identities = 163/194 (84%), Positives = 182/194 (93%), Gaps = 2/194 (1%)
 Frame = +2

Query: 89  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 262
           GQ++++P +ELS KVGNV ++RV+MR+TV+KS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 263 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 442
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 443 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 622
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 623 GGSFDPLGLADDPE 664
           GGSFDPLGLADDP+
Sbjct: 193 GGSFDPLGLADDPD 206