DK948559
Clone id TST38A01NGRL0003_K05
Library
Length 693
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_K05. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GCGAAAGCCGCCTTCTTCCTGTTATCATGCCTCGTCGAAGCGGCGGTGGAGGTATGCTTG
GTTTTCTTCTCTGTTCTTCGTCTAAATCGCTGATTGTGTGAGCTACGCAGCTACTTGTTT
TCCAGGGCTCGTTTTCGCTACGTGCTCGTCTGTGAAGTAGGGTTGTTACAGCATTTCTTA
CCTGGTAGTCCTTCCTTCATCAATTGTCTGGAGTGGGTTTCTTGCTTCCGGACAACCCAC
ATTTGGTGTAGGGCTTTTATTGCTCTGACAGCTTTGATTTGATCTGTGTCTCTCCGATTC
GGCCTAGGTTTGTTTGCTACCTAGTGGCTCAACGCCAGTAGCTATTGTTCAGGGATACTT
CGAACCCTAAGTTAAGGACATACGCAGTTGACTTGGATGTGCTCTGTTTAATGTTCTTTA
TGGCTGGCATCTCGCCTACACGTCTCTTCATGCACTTACGAACAGACGCAAATGACATTT
TGTGTGTCTCCGAGGTTAAAGGTTTAGGCTTTGTGAGGGATATGTGCTAGCATAGTAGCA
GATCTTGATTCTCCCCAAATGCTGCAGAGTTACAATCTGTGTTATTGTGTAGTATTGATT
ATTTCCAGAAATCGAACCTACTGTTGGTCATTATTTTCCCCAAGCACTGTCTTGTCTGAA
AAATTTGTGCTATTTTGTTTGTGCTAGGGCGTC
■■Homology search results ■■ -
sp_hit_id Q6BS08
Definition sp|Q6BS08|ATG1_DEBHA Serine/threonine-protein kinase ATG1 OS=Debaryomyces hansenii
Align length 47
Score (bit) 37.0
E-value 0.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948559|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_K05, 5'
(693 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6BS08|ATG1_DEBHA Serine/threonine-protein kinase ATG1 OS=Deb... 37 0.10
sp|P55602|Y4OQ_RHISN Probable ABC transporter permease protein y... 33 1.9
sp|Q5A649|ATG1_CANAL Serine/threonine-protein kinase ATG1 OS=Can... 31 7.2
sp|Q9JKT7|T2R13_RAT Taste receptor type 2 member 13 OS=Rattus no... 31 7.2

>sp|Q6BS08|ATG1_DEBHA Serine/threonine-protein kinase ATG1
OS=Debaryomyces hansenii GN=ATG1 PE=3 SV=2
Length = 875

Score = 37.0 bits (84), Expect = 0.10
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3

Query: 490 ETHKMSFASVRKCMKRRVGEMPAIKNIKQSTSKSTAYVLNLGFEVSL 350
E K SFA+V KC + E AIK++ +S KS V NL E+S+
Sbjct: 27 EIGKGSFATVYKCFNTKTNESVAIKSVVRSKLKSKKLVENLEIEISI 73


>sp|P55602|Y4OQ_RHISN Probable ABC transporter permease protein y4oQ
OS=Rhizobium sp. (strain NGR234) GN=y4oQ PE=3 SV=1
Length = 309

Score = 32.7 bits (73), Expect = 1.9
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1

Query: 178 LPGSPS-FINCLEWVSCFRTTHIWCRAFIALTALI*SVSLRFGLGLFAT*WLNASSYCSG 354
+PGS FI L + R++ W + L + +VSL LG+ LN + G
Sbjct: 59 VPGSDQDFIGLLNYTDVLRSSEFWAAIRVTLIYAVVAVSLECALGILFAVLLNLEFFGRG 118

Query: 355 ILRTL 369
+ R+L
Sbjct: 119 LFRSL 123


>sp|Q5A649|ATG1_CANAL Serine/threonine-protein kinase ATG1
OS=Candida albicans GN=ATG1 PE=3 SV=1
Length = 834

Score = 30.8 bits (68), Expect = 7.2
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3

Query: 490 ETHKMSFASVRKCMKRRVGEMPAIKNIKQSTSKSTAYVLNLGFEVSLNNS 341
E K SFA+V KC+ + AIK++ +S KS + NL E+ + S
Sbjct: 63 EIGKGSFATVYKCIDTTNNKAVAIKSVYRSKLKSKKLLENLEIEIQILKS 112


>sp|Q9JKT7|T2R13_RAT Taste receptor type 2 member 13 OS=Rattus
norvegicus GN=Tas2r13 PE=1 SV=1
Length = 305

Score = 30.8 bits (68), Expect = 7.2
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1

Query: 202 NCLEWVSCFRTTHI-WCRAFIALTALI*SVSLRFGLGLFAT*WLNASSYCSGILRTLS*G 378
NC+ W+S + I W + F+A++ ++ + WL Y L
Sbjct: 31 NCIAWLSKRTLSFIGWIQLFLAISRVVLIWEMLLA-------WLKYMKYSFSYLAGTELR 83

Query: 379 HTQLTWMCSV*CSLWLASRLHV 444
LTW+ S SLWLA+ L +
Sbjct: 84 VMMLTWVVSNHFSLWLATILSI 105


tr_hit_id A3GH58
Definition tr|A3GH58|A3GH58_PICST Serine/threonine-protein kinase ATG1 (Autophagy-related protein 1) OS=Pichia stipitis
Align length 50
Score (bit) 35.0
E-value 4.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948559|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_K05, 5'
(693 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3GH58|A3GH58_PICST Serine/threonine-protein kinase ATG1 (Aut... 35 4.5
tr|B0D701|B0D701_LACBS Predicted protein OS=Laccaria bicolor (st... 34 7.8
tr|A1C447|A1C447_ASPCL Putative uncharacterized protein OS=Asper... 34 7.8

>tr|A3GH58|A3GH58_PICST Serine/threonine-protein kinase ATG1
(Autophagy-related protein 1) OS=Pichia stipitis GN=ATG1
PE=4 SV=1
Length = 808

Score = 35.0 bits (79), Expect = 4.5
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = -3

Query: 490 ETHKMSFASVRKCMKRRVGEMPAIKNIKQSTSKSTAYVLNLGFEVSLNNS 341
E K SFA+V KC+ + + AIK++ +S KS + NL E+S+ S
Sbjct: 12 EIGKGSFATVYKCIDNKTHKAVAIKSVVRSKLKSKKLIENLEIEISILKS 61


>tr|B0D701|B0D701_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_318752 PE=4 SV=1
Length = 603

Score = 34.3 bits (77), Expect = 7.8
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1

Query: 58 LVFFSVLRLNR*LCELRSYLFSRARFRYVLVCEVGLLQHFLPGSPSFINCLEWVSCFRTT 237
LV S++ R LC+ +LF R RF+Y + + G G P++ EW+ F T
Sbjct: 58 LVLGSIIETGRRLCQ---WLFERLRFQYSITIQFG------EGDPTY----EWIILFLTE 104

Query: 238 H-IWCRA 255
H +W R+
Sbjct: 105 HNVWRRS 111


>tr|A1C447|A1C447_ASPCL Putative uncharacterized protein
OS=Aspergillus clavatus GN=ACLA_058450 PE=4 SV=1
Length = 656

Score = 34.3 bits (77), Expect = 7.8
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -1

Query: 342 ATGVEPLGSKQT*AESERHRSNQSCQSNKSPTPNVGCPEARNPLQTIDEGRTTR*EML*Q 163
A+ +PL Q+ ++S+ +QS + + PT + PE R L++ D G R E+
Sbjct: 233 ASESQPLPQVQSPSQSQLQPQSQSQPNGEHPTASPAAPEQRRSLRSNDTGLRARSEL--A 290

Query: 162 PYFTD-EHVAKTSPGK 118
PYF + E + P K
Sbjct: 291 PYFWNYEQILSLEPPK 306