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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948602
Clone id TST38A01NGRL0003_M01
Library
Length 661
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_M01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CAACAGCAATGGCAACAACAGGACTGGAGTCGCTAGTCGACCAAACAATATCCGTCATAA
CGAACGATGGCCGGAATATAGTGGGTGTACTTAAGGGCTTTGATCAGGCCACAAACCTCA
TTTTGGACGAGTCCCACGAGCGAGTTTACTCCACAAAGGTCGGTGTGGAGCCTATAGTGT
TAGGACTATACATTATAAGGGGAGACAACATTGCGGTTGTAGGTGAGTTGGATGAGGAGC
TAGATGAGCATCTGGACCTCTCTTCTCTACGAGCACATCCTCTAAAGCCTGTGCAGCATT
AATGAGTTCATGGAGTGGACTTTAGGGTTTTCAGGTTTTTCTGGTCTTACGGCCAATGGG
CACTCTCTTGCTTTCAACCTTAACTTGTCTCCAACGAAAGGTTACAACTTTACTAGCACC
GACATCATGACACCAGACGTAGATTGGGAGACTTCTAAGTGCAGCAATGGGTCGCCTTTC
TACAATGCAAGTGGGCGGGAGTATCTTTATGGGAAGCTTTAACAATTGAGGGTGTATGAA
TTAGCTTGCCCTATCGACTACAGTTAAGACTGTTTTGCGTCATATTTTATACACAAATTT
TGGACTTGATACCCCACATGGTTTCTGGCCAACAATGGGCATTTTCTTTTATGCAACCAT
G
■■Homology search results ■■ -
sp_hit_id Q5RCP3
Definition sp|Q5RCP3|LSM8_PONAB U6 snRNA-associated Sm-like protein LSm8 OS=Pongo abelii
Align length 92
Score (bit) 108.0
E-value 2.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948602|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_M01, 5'
         (641 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5RCP3|LSM8_PONAB U6 snRNA-associated Sm-like protein LSm8 OS...   108   2e-23
sp|Q6ZWM4|LSM8_MOUSE U6 snRNA-associated Sm-like protein LSm8 OS...   108   2e-23
sp|O95777|LSM8_HUMAN U6 snRNA-associated Sm-like protein LSm8 OS...   108   2e-23
sp|Q3ZCE0|LSM8_BOVIN U6 snRNA-associated Sm-like protein LSm8 OS...   108   2e-23
sp|Q1ZXD5|LSM8_DICDI Probable U6 snRNA-associated Sm-like protei...    82   2e-15
sp|O74483|LSM8_SCHPO U6 snRNA-associated Sm-like protein LSm8 OS...    78   3e-14
sp|Q54W83|LSM1_DICDI Probable U6 snRNA-associated Sm-like protei...    56   1e-07
sp|P87173|LSM1_SCHPO U6 snRNA-associated Sm-like protein LSm1 OS...    54   5e-07
sp|P47017|LSM1_YEAST Sm-like protein LSm1 OS=Saccharomyces cerev...    52   3e-06
sp|Q8VC85|LSM1_MOUSE U6 snRNA-associated Sm-like protein LSm1 OS...    48   5e-05
sp|O15116|LSM1_HUMAN U6 snRNA-associated Sm-like protein LSm1 OS...    48   5e-05
sp|Q5E9Z8|LSM1_BOVIN U6 snRNA-associated Sm-like protein LSm1 OS...    48   5e-05
sp|O74499|LSM7_SCHPO U6 snRNA-associated Sm-like protein LSm7 OS...    46   2e-04
sp|P40018|RSMB_YEAST Small nuclear ribonucleoprotein-associated ...    45   4e-04
sp|P62309|RUXG_MOUSE Small nuclear ribonucleoprotein G OS=Mus mu...    44   5e-04
sp|P62308|RUXG_HUMAN Small nuclear ribonucleoprotein G OS=Homo s...    44   5e-04
sp|Q3ZBL0|RUXG_BOVIN Small nuclear ribonucleoprotein G OS=Bos ta...    44   5e-04
sp|Q10163|RSMB_SCHPO Small nuclear ribonucleoprotein-associated ...    43   0.001
sp|Q9CQQ8|LSM7_MOUSE U6 snRNA-associated Sm-like protein LSm7 OS...    42   0.003
sp|O74966|RUXG_SCHPO Probable small nuclear ribonucleoprotein G ...    42   0.004
sp|Q9UK45|LSM7_HUMAN U6 snRNA-associated Sm-like protein LSm7 OS...    42   0.004
sp|Q54HF6|LSM7_DICDI Probable U6 snRNA-associated Sm-like protei...    42   0.004
sp|Q54RX0|RUXG_DICDI Probable small nuclear ribonucleoprotein G ...    41   0.006
sp|Q9N4G9|RUXG_CAEEL Probable small nuclear ribonucleoprotein G ...    41   0.006
sp|O82221|RUXG_ARATH Probable small nuclear ribonucleoprotein G ...    41   0.006
sp|A8MWD9|RUXGL_HUMAN Small nuclear ribonucleoprotein G-like pro...    40   0.008
sp|P24715|RUXG_MEDSA Probable small nuclear ribonucleoprotein G ...    40   0.010
sp|Q9VXE0|RUXG_DROME Probable small nuclear ribonucleoprotein G ...    40   0.010
sp|P91918|RSMB_CAEEL Probable small nuclear ribonucleoprotein-as...    39   0.018
sp|Q9YEQ5|RUXX_AERPE Putative snRNP Sm-like protein OS=Aeropyrum...    39   0.030

>sp|Q5RCP3|LSM8_PONAB U6 snRNA-associated Sm-like protein LSm8
           OS=Pongo abelii GN=LSM8 PE=3 SV=3
          Length = 96

 Score =  108 bits (271), Expect = 2e-23
 Identities = 52/92 (56%), Positives = 67/92 (72%)
 Frame = +1

Query: 4   LESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRG 183
           LE+ +++T++VIT+DGR IVG LKGFDQ  NLILDESHERV+S+  GVE +VLGLYI+RG
Sbjct: 5   LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64

Query: 184 DNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           DN+AV+G             ++RA PL  V H
Sbjct: 65  DNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96


>sp|Q6ZWM4|LSM8_MOUSE U6 snRNA-associated Sm-like protein LSm8
           OS=Mus musculus GN=Lsm8 PE=2 SV=3
          Length = 96

 Score =  108 bits (271), Expect = 2e-23
 Identities = 52/92 (56%), Positives = 67/92 (72%)
 Frame = +1

Query: 4   LESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRG 183
           LE+ +++T++VIT+DGR IVG LKGFDQ  NLILDESHERV+S+  GVE +VLGLYI+RG
Sbjct: 5   LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64

Query: 184 DNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           DN+AV+G             ++RA PL  V H
Sbjct: 65  DNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96


>sp|O95777|LSM8_HUMAN U6 snRNA-associated Sm-like protein LSm8
           OS=Homo sapiens GN=LSM8 PE=1 SV=3
          Length = 96

 Score =  108 bits (271), Expect = 2e-23
 Identities = 52/92 (56%), Positives = 67/92 (72%)
 Frame = +1

Query: 4   LESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRG 183
           LE+ +++T++VIT+DGR IVG LKGFDQ  NLILDESHERV+S+  GVE +VLGLYI+RG
Sbjct: 5   LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64

Query: 184 DNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           DN+AV+G             ++RA PL  V H
Sbjct: 65  DNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96


>sp|Q3ZCE0|LSM8_BOVIN U6 snRNA-associated Sm-like protein LSm8
           OS=Bos taurus GN=LSM8 PE=3 SV=3
          Length = 96

 Score =  108 bits (271), Expect = 2e-23
 Identities = 52/92 (56%), Positives = 67/92 (72%)
 Frame = +1

Query: 4   LESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRG 183
           LE+ +++T++VIT+DGR IVG LKGFDQ  NLILDESHERV+S+  GVE +VLGLYI+RG
Sbjct: 5   LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64

Query: 184 DNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           DN+AV+G             ++RA PL  V H
Sbjct: 65  DNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96


>sp|Q1ZXD5|LSM8_DICDI Probable U6 snRNA-associated Sm-like protein
           LSm8 OS=Dictyostelium discoideum GN=lsm8 PE=3 SV=1
          Length = 94

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 38/92 (41%), Positives = 61/92 (66%)
 Frame = +1

Query: 4   LESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRG 183
           LES + + + V+T DGR+I+G L+G DQ  N++L++ HERVYS + G+E I LG+++I+G
Sbjct: 4   LESYLKKQVLVLTADGRSIIGTLRGIDQTINVVLEKCHERVYSDE-GIEVIPLGVHLIKG 62

Query: 184 DNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           D++AV+G              + A P+KP+ H
Sbjct: 63  DDVAVIGEVDDELDKKLNLKEIIAEPMKPIVH 94


>sp|O74483|LSM8_SCHPO U6 snRNA-associated Sm-like protein LSm8
           OS=Schizosaccharomyces pombe GN=lsm8 PE=1 SV=1
          Length = 94

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 38/92 (41%), Positives = 55/92 (59%)
 Frame = +1

Query: 4   LESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRG 183
           L   ++Q + VITNDGR ++G LKGFD  TNLIL +S ER+ S    +E I LG+Y++RG
Sbjct: 3   LADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYLLRG 62

Query: 184 DNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           +N+A+VG            + +R   +  V H
Sbjct: 63  ENVAMVGLVNEELDSEIEWTKIRGEAIPDVVH 94


>sp|Q54W83|LSM1_DICDI Probable U6 snRNA-associated Sm-like protein
           LSm1 OS=Dictyostelium discoideum GN=lsm1 PE=3 SV=1
          Length = 129

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
 Frame = +1

Query: 1   GLESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVG--VEPIVLGLYI 174
           GL   VD+ + V+  DGR  +G+++ FDQ  N++L ++ ER+Y   VG       LGL+ 
Sbjct: 4   GLGDEVDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIY---VGDCYSDKNLGLFF 60

Query: 175 IRGDNIAVVG 204
           IRGDN+ ++G
Sbjct: 61  IRGDNVVILG 70


>sp|P87173|LSM1_SCHPO U6 snRNA-associated Sm-like protein LSm1
           OS=Schizosaccharomyces pombe GN=lsm1 PE=2 SV=1
          Length = 140

 Score = 54.3 bits (129), Expect = 5e-07
 Identities = 25/67 (37%), Positives = 43/67 (64%)
 Frame = +1

Query: 4   LESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRG 183
           L   VD+ + V+  DG+ ++G+L+ FDQ  NL+L  + ER+Y   +    I  G+YI+RG
Sbjct: 16  LVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDM-YGDIDRGVYIVRG 74

Query: 184 DNIAVVG 204
           +N+ ++G
Sbjct: 75  ENVVLLG 81


>sp|P47017|LSM1_YEAST Sm-like protein LSm1 OS=Saccharomyces
           cerevisiae GN=LSM1 PE=1 SV=1
          Length = 172

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
 Frame = +1

Query: 10  SLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVY---STKVGVEPIVLGLYIIR 180
           S VD+ I V+  DGR + GVL+ FDQ  NLIL +  ER+Y     K   E    G+++IR
Sbjct: 48  SSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEED--RGIFMIR 105

Query: 181 GDNIAVVG 204
           G+N+ ++G
Sbjct: 106 GENVVMLG 113


>sp|Q8VC85|LSM1_MOUSE U6 snRNA-associated Sm-like protein LSm1
           OS=Mus musculus GN=Lsm1 PE=2 SV=1
          Length = 133

 Score = 47.8 bits (112), Expect = 5e-05
 Identities = 21/63 (33%), Positives = 40/63 (63%)
 Frame = +1

Query: 16  VDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRGDNIA 195
           +D+   V+  DGR ++G L+  DQ  NL+L ++ ER++  K     I  G++++RG+N+ 
Sbjct: 14  IDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGK-KYGDIPRGIFVVRGENVV 72

Query: 196 VVG 204
           ++G
Sbjct: 73  LLG 75
tr_hit_id A9T2B0
Definition tr|A9T2B0|A9T2B0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 93
Score (bit) 142.0
E-value 1.0e-32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948602|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_M01, 5'
         (641 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T2B0|A9T2B0_PHYPA Predicted protein OS=Physcomitrella paten...   142   1e-32
tr|A9PCH9|A9PCH9_POPTR Putative uncharacterized protein OS=Popul...   142   1e-32
tr|A7PAX0|A7PAX0_VITVI Chromosome chr16 scaffold_10, whole genom...   142   2e-32
tr|A9NQ65|A9NQ65_PICSI Putative uncharacterized protein OS=Picea...   136   9e-31
tr|Q5TKF9|Q5TKF9_ORYSJ Os05g0594900 protein OS=Oryza sativa subs...   136   1e-30
tr|Q8VYI0|Q8VYI0_ARATH At1g65700/F1E22_3 (Small nuclear ribonucl...   134   4e-30
tr|B4FNR5|B4FNR5_MAIZE LSM Sm-like protein family member OS=Zea ...   130   5e-29
tr|Q9SHY4|Q9SHY4_ARATH F1E22.8 OS=Arabidopsis thaliana PE=4 SV=1      122   2e-26
tr|B8AXH5|B8AXH5_ORYSI Putative uncharacterized protein OS=Oryza...   119   2e-25
tr|A3B7F6|A3B7F6_ORYSJ Putative uncharacterized protein OS=Oryza...   116   1e-24
tr|B0X8M5|B0X8M5_CULQU LSM8 protein OS=Culex quinquefasciatus GN...   115   2e-24
tr|Q7PZC3|Q7PZC3_ANOGA AGAP011837-PA OS=Anopheles gambiae GN=AGA...   114   5e-24
tr|Q17E06|Q17E06_AEDAE Small nuclear ribonucleoprotein, core, pu...   114   7e-24
tr|B6LY78|B6LY78_BRAFL Putative uncharacterized protein OS=Branc...   113   9e-24
tr|B0WHZ0|B0WHZ0_CULQU Putative uncharacterized protein OS=Culex...   111   3e-23
tr|B4IYN4|B4IYN4_DROGR GH15765 OS=Drosophila grimshawi GN=GH1576...   110   6e-23
tr|Q29F00|Q29F00_DROPS GA15189 OS=Drosophila pseudoobscura pseud...   110   7e-23
tr|B4H5R5|B4H5R5_DROPE GL16212 OS=Drosophila persimilis GN=GL162...   110   7e-23
tr|Q9W087|Q9W087_DROME CG2021 OS=Drosophila melanogaster GN=CG20...   110   1e-22
tr|B4QMK6|B4QMK6_DROSI GD13439 OS=Drosophila simulans GN=GD13439...   110   1e-22
tr|B4PDT9|B4PDT9_DROYA GE20916 OS=Drosophila yakuba GN=GE20916 P...   110   1e-22
tr|B4MGM6|B4MGM6_DROVI GJ16072 OS=Drosophila virilis GN=GJ16072 ...   110   1e-22
tr|B4HW01|B4HW01_DROSE GM14170 OS=Drosophila sechellia GN=GM1417...   110   1e-22
tr|B3NEV2|B3NEV2_DROER GG14562 OS=Drosophila erecta GN=GG14562 P...   110   1e-22
tr|B3M7A6|B3M7A6_DROAN GF24963 OS=Drosophila ananassae GN=GF2496...   110   1e-22
tr|B2RZB6|B2RZB6_RAT LSM8 homolog, U6 small nuclear RNA associat...   108   2e-22
tr|B4MXT8|B4MXT8_DROWI GK20525 OS=Drosophila willistoni GN=GK205...   108   2e-22
tr|B4KXU9|B4KXU9_DROMO GI12774 OS=Drosophila mojavensis GN=GI127...   108   2e-22
tr|A4D0W0|A4D0W0_HUMAN Putative uncharacterized protein OS=Homo ...   108   2e-22
tr|B5XE72|B5XE72_SALSA U6 snRNA-associated Sm-like protein LSm8 ...   108   3e-22

>tr|A9T2B0|A9T2B0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_167674 PE=4 SV=1
          Length = 98

 Score =  142 bits (359), Expect = 1e-32
 Identities = 73/93 (78%), Positives = 77/93 (82%)
 Frame = +1

Query: 1   GLESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIR 180
           GLESL+DQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTK GVE +VLGL+IIR
Sbjct: 6   GLESLIDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKAGVEQVVLGLHIIR 65

Query: 181 GDNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           GDNI VVG            S+LRAHPLK VQH
Sbjct: 66  GDNIGVVGELDEELDSNLDLSALRAHPLKAVQH 98


>tr|A9PCH9|A9PCH9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 98

 Score =  142 bits (359), Expect = 1e-32
 Identities = 73/93 (78%), Positives = 77/93 (82%)
 Frame = +1

Query: 1   GLESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIR 180
           GLESLVDQTIS+ITNDGRNIVGVLKGFDQATN+ILDESHERVYSTK GV+ +VLGLYIIR
Sbjct: 6   GLESLVDQTISIITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIR 65

Query: 181 GDNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           GDNI VVG            SSLRAHPLKPV H
Sbjct: 66  GDNIGVVGELDEELDAHLDLSSLRAHPLKPVIH 98


>tr|A7PAX0|A7PAX0_VITVI Chromosome chr16 scaffold_10, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00013856001
           PE=4 SV=1
          Length = 98

 Score =  142 bits (358), Expect = 2e-32
 Identities = 72/93 (77%), Positives = 77/93 (82%)
 Frame = +1

Query: 1   GLESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIR 180
           GLESLVDQTISVITNDGRNIVGVLKGFDQATN+ILDESHERVYSTK GV+ +VLGLYIIR
Sbjct: 6   GLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIR 65

Query: 181 GDNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           GDNI++VG            S LRAHPLKPV H
Sbjct: 66  GDNISIVGELDEELDSSLDLSKLRAHPLKPVTH 98


>tr|A9NQ65|A9NQ65_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 98

 Score =  136 bits (343), Expect = 9e-31
 Identities = 68/93 (73%), Positives = 75/93 (80%)
 Frame = +1

Query: 1   GLESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIR 180
           GLE LVD+TISVITNDGRNIVG+LKG+DQATNLI+DESHERVYST+ GVE +VLGLYIIR
Sbjct: 6   GLEDLVDETISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTRTGVEQLVLGLYIIR 65

Query: 181 GDNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           GDNI+VVG            S LRA PLKPV H
Sbjct: 66  GDNISVVGELDEDLDSNLDLSQLRAQPLKPVMH 98


>tr|Q5TKF9|Q5TKF9_ORYSJ Os05g0594900 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0030I14.7 PE=4 SV=1
          Length = 99

 Score =  136 bits (342), Expect = 1e-30
 Identities = 69/93 (74%), Positives = 76/93 (81%)
 Frame = +1

Query: 1   GLESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIR 180
           GLESLVDQ ISVITNDGRNIVG L+GFDQATN+ILDESHERVYST+ GV+ +VLGLYIIR
Sbjct: 7   GLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTREGVQQLVLGLYIIR 66

Query: 181 GDNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           GDNI+VVG            S+LRAHPLKPV H
Sbjct: 67  GDNISVVGEVDEELDARLDLSNLRAHPLKPVIH 99


>tr|Q8VYI0|Q8VYI0_ARATH At1g65700/F1E22_3 (Small nuclear
           ribonucleoprotein, putative) OS=Arabidopsis thaliana
           GN=At1g65700 PE=4 SV=1
          Length = 98

 Score =  134 bits (338), Expect = 4e-30
 Identities = 69/93 (74%), Positives = 74/93 (79%)
 Frame = +1

Query: 1   GLESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIR 180
           GLE+LVDQ ISVITNDGRNIVGVLKGFDQATN+ILDESHERV+STK GV+  VLGLYIIR
Sbjct: 6   GLETLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIR 65

Query: 181 GDNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           GDNI V+G            S LRAHPLKPV H
Sbjct: 66  GDNIGVIGELDEELDASLDFSKLRAHPLKPVVH 98


>tr|B4FNR5|B4FNR5_MAIZE LSM Sm-like protein family member OS=Zea
           mays PE=4 SV=1
          Length = 99

 Score =  130 bits (328), Expect = 5e-29
 Identities = 67/92 (72%), Positives = 72/92 (78%)
 Frame = +1

Query: 4   LESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRG 183
           LE LVDQ ISVITNDGRNIVG L+GFDQATN+ILDESHERVYS K GV+ +VLGLYIIRG
Sbjct: 8   LEPLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSRKEGVQQLVLGLYIIRG 67

Query: 184 DNIAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           DNI+VVG            S LRAHPLKPV H
Sbjct: 68  DNISVVGEVDEELDSRLDMSKLRAHPLKPVIH 99


>tr|Q9SHY4|Q9SHY4_ARATH F1E22.8 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 583

 Score =  122 bits (306), Expect = 2e-26
 Identities = 63/90 (70%), Positives = 69/90 (76%)
 Frame = +1

Query: 10  SLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKVGVEPIVLGLYIIRGDN 189
           S + + ISVITNDGRNIVGVLKGFDQATN+ILDESHERV+STK GV+  VLGLYIIRGDN
Sbjct: 494 SSIVKIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDN 553

Query: 190 IAVVGXXXXXXXXXXXXSSLRAHPLKPVQH 279
           I V+G            S LRAHPLKPV H
Sbjct: 554 IGVIGELDEELDASLDFSKLRAHPLKPVVH 583


>tr|B8AXH5|B8AXH5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_21233 PE=4 SV=1
          Length = 136

 Score =  119 bits (297), Expect = 2e-25
 Identities = 70/130 (53%), Positives = 76/130 (58%), Gaps = 37/130 (28%)
 Frame = +1

Query: 1   GLESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYST--------------- 135
           GLESLVDQ ISVITNDGRNIVG L+GFDQATN+ILDESHERVYST               
Sbjct: 7   GLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTRYVLVNCDLLPGLLS 66

Query: 136 ----------------------KVGVEPIVLGLYIIRGDNIAVVGXXXXXXXXXXXXSSL 249
                                 K GV+ +VLGLYIIRGDNI+VVG            S+L
Sbjct: 67  NALIGSLVQNSAISNKFLSWCLKEGVQQLVLGLYIIRGDNISVVGEVDEELDARLDLSNL 126

Query: 250 RAHPLKPVQH 279
           RAHPLKPV H
Sbjct: 127 RAHPLKPVIH 136


>tr|A3B7F6|A3B7F6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_018978 PE=4 SV=1
          Length = 141

 Score =  116 bits (290), Expect = 1e-24
 Identities = 69/135 (51%), Positives = 76/135 (56%), Gaps = 42/135 (31%)
 Frame = +1

Query: 1   GLESLVDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKV------------- 141
           GLESLVDQ ISVITNDGRNIVG L+GFDQATN+ILDESHERVYST+              
Sbjct: 7   GLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTRYVLVNCDLLPGLLS 66

Query: 142 -----------------------------GVEPIVLGLYIIRGDNIAVVGXXXXXXXXXX 234
                                        GV+ +VLGLYIIRGDNI+VVG          
Sbjct: 67  NALIGSLVQNSAISNKFLSWCLKVSCQHDGVQQLVLGLYIIRGDNISVVGEVDEELDARL 126

Query: 235 XXSSLRAHPLKPVQH 279
             S+LRAHPLKPV H
Sbjct: 127 DLSNLRAHPLKPVIH 141